RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 PRDM1O75626 825 aa23.95■■□□□ 1.42
TRAPPC6A-203ENST00000587818 INHAP05111 366 aa23.95■■□□□ 1.42
TRAPPC6A-203ENST00000587818 RASA1P20936 1047 aa23.95■■□□□ 1.42
TRAPPC6A-203ENST00000587818 SAMD1Q6SPF0 538 aaPredicted RBP23.95■■□□□ 1.42
TRAPPC6A-203ENST00000587818 CHD1LQ86WJ1 897 aa23.95■■□□□ 1.42
TRAPPC6A-203ENST00000587818 PXYLP1Q8TE99 480 aa23.95■■□□□ 1.42
TRAPPC6A-203ENST00000587818 TANGO6Q9C0B7 1094 aa23.95■■□□□ 1.42
TRAPPC6A-203ENST00000587818 RABGAP1Q9Y3P9 1069 aa23.95■■□□□ 1.42
TRAPPC6A-203ENST00000587818 RBBP6Q7Z6E9 1792 aaKnown RBP23.95■■□□□ 1.42
TRAPPC6A-203ENST00000587818 PDE4DIPQ5VU43 2346 aa23.95■■□□□ 1.42
TRAPPC6A-203ENST00000587818 SPDYE16A6NNV3 312 aaPredicted RBP23.94■■□□□ 1.42
TRAPPC6A-203ENST00000587818 NUCB1Q02818 461 aa23.94■■□□□ 1.42
TRAPPC6A-203ENST00000587818 COG2Q14746 738 aa23.94■■□□□ 1.42
TRAPPC6A-203ENST00000587818 GTF3C2Q8WUA4 911 aaPredicted RBP23.94■■□□□ 1.42
TRAPPC6A-203ENST00000587818 KANSL2Q9H9L4 492 aa23.94■■□□□ 1.42
TRAPPC6A-203ENST00000587818 TRIM6-TRIM34B2RNG4 842 aa23.93■■□□□ 1.42
TRAPPC6A-203ENST00000587818 RAD21O60216 631 aa23.93■■□□□ 1.42
TRAPPC6A-203ENST00000587818 TRIM32Q13049 653 aa23.93■■□□□ 1.42
TRAPPC6A-203ENST00000587818 PLEKHM2Q8IWE5 1019 aa23.93■■□□□ 1.42
TRAPPC6A-203ENST00000587818 RILPL2Q969X0 211 aa23.93■■□□□ 1.42
TRAPPC6A-203ENST00000587818 NACAP1Q9BZK3 213 aa23.93■■□□□ 1.42
TRAPPC6A-203ENST00000587818 VCPKMTQ9H867 229 aa23.93■■□□□ 1.42
TRAPPC6A-203ENST00000587818 PLXNB2O15031 1838 aa23.93■■□□□ 1.42
TRAPPC6A-203ENST00000587818 WDR78Q5VTH9 848 aa23.92■■□□□ 1.42
TRAPPC6A-203ENST00000587818 GPR142Q7Z601 462 aa23.92■■□□□ 1.42
TRAPPC6A-203ENST00000587818 ZNF444Q8N0Y2 327 aaPredicted RBP23.92■■□□□ 1.42
TRAPPC6A-203ENST00000587818 FAM227BQ96M60 508 aa23.92■■□□□ 1.42
TRAPPC6A-203ENST00000587818 NAPBQ9H115 298 aa23.92■■□□□ 1.42
TRAPPC6A-203ENST00000587818 FOXP2O15409 715 aa23.91■■□□□ 1.42
TRAPPC6A-203ENST00000587818 MAPK4P31152 587 aa23.91■■□□□ 1.42
TRAPPC6A-203ENST00000587818 VPS53Q5VIR6 699 aa23.91■■□□□ 1.42
TRAPPC6A-203ENST00000587818 PLEKHH3Q7Z736 793 aa23.91■■□□□ 1.42
TRAPPC6A-203ENST00000587818 SHISA4Q96DD7 197 aa23.91■■□□□ 1.42
TRAPPC6A-203ENST00000587818 NUDT12Q9BQG2 462 aa23.91■■□□□ 1.42
TRAPPC6A-203ENST00000587818 SH2D4AQ9H788 454 aa23.91■■□□□ 1.42
TRAPPC6A-203ENST00000587818 CWC22Q9HCG8 908 aaKnown RBP23.91■■□□□ 1.42
TRAPPC6A-203ENST00000587818 INCENPQ9NQS7 918 aa23.91■■□□□ 1.42
TRAPPC6A-203ENST00000587818 HOXC10Q9NYD6 342 aa23.91■■□□□ 1.42
TRAPPC6A-203ENST00000587818 GJB1P08034 283 aa23.9■■□□□ 1.42
TRAPPC6A-203ENST00000587818 FLOT1O75955 427 aa23.89■■□□□ 1.41
TRAPPC6A-203ENST00000587818 DSG3P32926 999 aa23.89■■□□□ 1.41
TRAPPC6A-203ENST00000587818 CTDSPL2Q05D32 466 aa23.89■■□□□ 1.41
TRAPPC6A-203ENST00000587818 PPARAQ07869 468 aa23.89■■□□□ 1.41
TRAPPC6A-203ENST00000587818 NMIQ13287 307 aaPredicted RBP23.89■■□□□ 1.41
TRAPPC6A-203ENST00000587818 LBX2Q6XYB7 198 aa23.89■■□□□ 1.41
TRAPPC6A-203ENST00000587818 LPAR1Q92633 364 aa23.89■■□□□ 1.41
TRAPPC6A-203ENST00000587818 ATG4CQ96DT6 458 aa23.89■■□□□ 1.41
TRAPPC6A-203ENST00000587818 HELLSQ9NRZ9 838 aa23.89■■□□□ 1.41
TRAPPC6A-203ENST00000587818 CLIP2Q9UDT6 1046 aa23.89■■□□□ 1.41
TRAPPC6A-203ENST00000587818 ROBO3Q96MS0 1386 aa23.89■■□□□ 1.41
TRAPPC6A-203ENST00000587818 A0A0D9SFI3 127 aa23.88■■□□□ 1.41
TRAPPC6A-203ENST00000587818 GJA8P48165 433 aa23.88■■□□□ 1.41
TRAPPC6A-203ENST00000587818 CCNA1P78396 465 aa23.88■■□□□ 1.41
TRAPPC6A-203ENST00000587818 FAM47AQ5JRC9 791 aa23.88■■□□□ 1.41
TRAPPC6A-203ENST00000587818 MORN1Q5T089 497 aa23.88■■□□□ 1.41
TRAPPC6A-203ENST00000587818 U2AF1L4Q8WU68 220 aaKnown RBP23.88■■□□□ 1.41
TRAPPC6A-203ENST00000587818 TRIB2Q92519 343 aa23.88■■□□□ 1.41
TRAPPC6A-203ENST00000587818 USP6NLQ92738 828 aa23.88■■□□□ 1.41
TRAPPC6A-203ENST00000587818 DEFB118Q96PH6 123 aa23.88■■□□□ 1.41
TRAPPC6A-203ENST00000587818 FBXO28Q9NVF7 368 aa23.88■■□□□ 1.41
TRAPPC6A-203ENST00000587818 RLFQ13129 1914 aa23.88■■□□□ 1.41
TRAPPC6A-203ENST00000587818 CCL14Q16627 93 aa23.87■■□□□ 1.41
TRAPPC6A-203ENST00000587818 MCMDC2Q4G0Z9 681 aa23.87■■□□□ 1.41
TRAPPC6A-203ENST00000587818 NUP88Q99567 741 aaPredicted RBP23.87■■□□□ 1.41
TRAPPC6A-203ENST00000587818 MOV10L1Q9BXT6 1211 aaKnown RBP23.87■■□□□ 1.41
TRAPPC6A-203ENST00000587818 NYAP2Q9P242 653 aa23.87■■□□□ 1.41
TRAPPC6A-203ENST00000587818 IGKV6D-41A0A0C4DH26 115 aa23.86■■□□□ 1.41
TRAPPC6A-203ENST00000587818 WDR46O15213 610 aaKnown RBP23.86■■□□□ 1.41
TRAPPC6A-203ENST00000587818 SGPL1O95470 568 aa23.86■■□□□ 1.41
TRAPPC6A-203ENST00000587818 TFRCP02786 760 aaKnown RBP23.86■■□□□ 1.41
TRAPPC6A-203ENST00000587818 HMGCRP04035 888 aa23.86■■□□□ 1.41
TRAPPC6A-203ENST00000587818 TFAP4Q01664 338 aa23.86■■□□□ 1.41
TRAPPC6A-203ENST00000587818 PLS1Q14651 629 aa23.86■■□□□ 1.41
TRAPPC6A-203ENST00000587818 FAM83BQ5T0W9 1011 aa23.86■■□□□ 1.41
TRAPPC6A-203ENST00000587818 NKX2-3Q8TAU0 364 aa23.86■■□□□ 1.41
TRAPPC6A-203ENST00000587818 GOPCQ9HD26 462 aa23.86■■□□□ 1.41
TRAPPC6A-203ENST00000587818 TACC3Q9Y6A5 838 aa23.86■■□□□ 1.41
TRAPPC6A-203ENST00000587818 PTPREP23469 700 aa23.85■■□□□ 1.41
TRAPPC6A-203ENST00000587818 PDE4BQ07343 736 aa23.85■■□□□ 1.41
TRAPPC6A-203ENST00000587818 SOCS4Q8WXH5 440 aa23.85■■□□□ 1.41
TRAPPC6A-203ENST00000587818 CEP95Q96GE4 821 aa23.85■■□□□ 1.41
TRAPPC6A-203ENST00000587818 OSBPL3Q9H4L5 887 aa23.85■■□□□ 1.41
TRAPPC6A-203ENST00000587818 ZNF287Q9HBT7 754 aa23.85■■□□□ 1.41
TRAPPC6A-203ENST00000587818 GREB1LQ9C091 1923 aaPredicted RBP23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 F5H6K3 240 aa23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 SLC3A2P08195 630 aaKnown RBP23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 XRCC5P13010 732 aaKnown RBP23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 SDSP20132 328 aa23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 RGS2P41220 211 aa23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 KLRC3Q07444 240 aa23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 MAP2K5Q13163 448 aa23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 ZNF589Q86UQ0 364 aaPredicted RBP23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 CHMP4CQ96CF2 233 aa23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 SPATC1LQ9H0A9 340 aa23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 BRCA2P51587 3418 aa23.84■■□□□ 1.41
TRAPPC6A-203ENST00000587818 TSPY3P0CV98 308 aa23.83■■□□□ 1.41
TRAPPC6A-203ENST00000587818 TSPY8P0CW00 308 aa23.83■■□□□ 1.41
TRAPPC6A-203ENST00000587818 PDE4AP27815 886 aa23.83■■□□□ 1.41
TRAPPC6A-203ENST00000587818 NEDD1Q8NHV4 660 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms