RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 APOA5Q6Q788 366 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ZNF654Q8IZM8 581 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 FANCBQ8NB91 859 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ZNF280CQ8ND82 737 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 GMCL1P1Q8NEA9 526 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CHMP4CQ96CF2 233 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TMX3Q96JJ7 454 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 CLMNQ96JQ2 1002 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 TRPM7Q96QT4 1865 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 ELP3Q9H9T3 547 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 SH2B1Q9NRF2 756 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 HPS5Q9UPZ3 1129 aa10.71□□□□□ -0.69
CDK5RAP3-220ENST00000581160 DOCK1Q14185 1865 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 ATAD5Q96QE3 1844 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 PAPPA2Q9BXP8 1791 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 F5H6K3 240 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 K7ELQ4 463 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 CXCL11O14625 94 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 SNHG28P0DPA3 235 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 USP14P54578 494 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 BACE1P56817 501 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 KLRC3Q07444 240 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 SPP2Q13103 211 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 BECN1Q14457 450 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 SLFN13Q68D06 897 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 NOL8Q76FK4 1167 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 CCDC84Q86UT8 332 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 HSCBQ8IWL3 235 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 LRRC47Q8N1G4 583 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 KIAA1683Q9H0B3 1180 aa10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 SLKQ9H2G2 1235 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 NAP1L2Q9ULW6 460 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-220ENST00000581160 CCDC196A0A1B0GTZ2 297 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 PALM3A6NDB9 673 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 TMEM88BA6NKF7 163 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 LARGE1O95461 756 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 METAP2P50579 478 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 HUNKP57058 714 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 CCT2P78371 535 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 STK3Q13188 491 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 PPIL2Q13356 520 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 CUL4AQ13619 759 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 GRM4Q14833 912 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 SH3D19Q5HYK7 790 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 USP17L2Q6R6M4 530 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 SAPCD2Q86UD0 394 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 NUP133Q8WUM0 1156 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 DCAF4Q8WV16 495 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 GMCL1Q96IK5 515 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 MYL10Q9BUA6 226 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 VCPKMTQ9H867 229 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 GOPCQ9HD26 462 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 FAM217BQ9NTX9 383 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 KCNH4Q9UQ05 1017 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 TLL2Q9Y6L7 1015 aa10.69□□□□□ -0.7
CDK5RAP3-220ENST00000581160 NID2Q14112 1375 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 TRIM75PA6NK02 468 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 GOLGA8AA7E2F4 631 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 GOLGA8BA8MQT2 603 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 IRF6O14896 467 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 DHX16O60231 1041 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 NDUFB10O96000 172 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 PARP1P09874 1014 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 PDHBP11177 359 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 SMARCA1P28370 1054 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 KIF5BP33176 963 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 ADD1P35611 737 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 GNAQP50148 359 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 SCRN1Q12765 414 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 RTN1Q16799 776 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 KIAA1755Q5JYT7 1200 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 MICU3Q86XE3 530 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 RAB11FIP4Q86YS3 637 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 NECAB1Q8N987 351 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 CTCFLQ8NI51 663 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 CNKSR2Q8WXI2 1034 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 LPAR1Q92633 364 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 GTF3C6Q969F1 213 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 OPTNQ96CV9 577 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 OTUD5Q96G74 571 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 WNK4Q96J92 1243 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 HHIPL1Q96JK4 782 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 C12orf42Q96LP6 360 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 FEZ1Q99689 392 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 LZTS2Q9BRK4 669 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 RBM28Q9NW13 759 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 MAD2L2Q9UI95 211 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 MYH4Q9Y623 1939 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 PHIPQ8WWQ0 1821 aa10.68□□□□□ -0.7
CDK5RAP3-220ENST00000581160 ZBTB48P10074 688 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-220ENST00000581160 BMP3P12645 472 aa10.67□□□□□ -0.7
CDK5RAP3-220ENST00000581160 RXRAP19793 462 aa10.67□□□□□ -0.7
CDK5RAP3-220ENST00000581160 CDC27P30260 824 aa10.67□□□□□ -0.7
CDK5RAP3-220ENST00000581160 GJA5P36382 358 aa10.67□□□□□ -0.7
CDK5RAP3-220ENST00000581160 SLC1A4P43007 532 aa10.67□□□□□ -0.7
CDK5RAP3-220ENST00000581160 ZNF543Q08ER8 600 aa10.67□□□□□ -0.7
CDK5RAP3-220ENST00000581160 MTMR2Q13614 643 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms