RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 KIF22Q14807 665 aa23.93■■□□□ 1.42
SS18-218ENST00000581021 CEP95Q96GE4 821 aa23.93■■□□□ 1.42
SS18-218ENST00000581021 CNMDO75829 334 aa23.92■■□□□ 1.42
SS18-218ENST00000581021 FGRP09769 529 aa23.92■■□□□ 1.42
SS18-218ENST00000581021 PDE4BQ07343 736 aa23.92■■□□□ 1.42
SS18-218ENST00000581021 TBC1D10CQ8IV04 446 aa23.92■■□□□ 1.42
SS18-218ENST00000581021 ZNF444Q8N0Y2 327 aaPredicted RBP23.92■■□□□ 1.42
SS18-218ENST00000581021 NEDD1Q8NHV4 660 aa23.92■■□□□ 1.42
SS18-218ENST00000581021 SPDYE16A6NNV3 312 aaPredicted RBP23.91■■□□□ 1.42
SS18-218ENST00000581021 FMNL1O95466 1100 aaPredicted RBP23.91■■□□□ 1.42
SS18-218ENST00000581021 SLC3A2P08195 630 aaKnown RBP23.91■■□□□ 1.42
SS18-218ENST00000581021 FCGRTP55899 365 aa23.91■■□□□ 1.42
SS18-218ENST00000581021 TFAP4Q01664 338 aa23.91■■□□□ 1.42
SS18-218ENST00000581021 PRKCZQ05513 592 aa23.91■■□□□ 1.42
SS18-218ENST00000581021 ZNF287Q9HBT7 754 aa23.91■■□□□ 1.42
SS18-218ENST00000581021 MTMR4Q9NYA4 1195 aa23.91■■□□□ 1.42
SS18-218ENST00000581021 SRRDQ9UH36 339 aa23.91■■□□□ 1.42
SS18-218ENST00000581021 LAMA4Q16363 1823 aa23.91■■□□□ 1.42
SS18-218ENST00000581021 A0A0G2JMZ2 1700 aa23.9■■□□□ 1.42
SS18-218ENST00000581021 Q3C1V9 767 aa23.9■■□□□ 1.42
SS18-218ENST00000581021 LPAR1Q92633 364 aa23.9■■□□□ 1.42
SS18-218ENST00000581021 CCDC136Q96JN2 1154 aa23.9■■□□□ 1.42
SS18-218ENST00000581021 SH2D4AQ9H788 454 aa23.9■■□□□ 1.42
SS18-218ENST00000581021 NYAP2Q9P242 653 aa23.9■■□□□ 1.42
SS18-218ENST00000581021 GABRQQ9UN88 632 aa23.9■■□□□ 1.42
SS18-218ENST00000581021 BRCA2P51587 3418 aa23.9■■□□□ 1.42
SS18-218ENST00000581021 ORC4O43929 436 aa23.89■■□□□ 1.41
SS18-218ENST00000581021 NMT2O60551 498 aa23.89■■□□□ 1.41
SS18-218ENST00000581021 GNRH1P01148 92 aa23.89■■□□□ 1.41
SS18-218ENST00000581021 TSPY3P0CV98 308 aa23.89■■□□□ 1.41
SS18-218ENST00000581021 TSPY8P0CW00 308 aa23.89■■□□□ 1.41
SS18-218ENST00000581021 MFAP1P55081 439 aaKnown RBP23.89■■□□□ 1.41
SS18-218ENST00000581021 ARHGEF6Q15052 776 aa23.89■■□□□ 1.41
SS18-218ENST00000581021 PAGR1Q9BTK6 254 aa23.89■■□□□ 1.41
SS18-218ENST00000581021 TANGO6Q9C0B7 1094 aa23.89■■□□□ 1.41
SS18-218ENST00000581021 IL17RBQ9NRM6 502 aa23.89■■□□□ 1.41
SS18-218ENST00000581021 PARP14Q460N5 1801 aa23.89■■□□□ 1.41
SS18-218ENST00000581021 MYPNQ86TC9 1320 aa23.88■■□□□ 1.41
SS18-218ENST00000581021 LBX2Q6XYB7 198 aa23.88■■□□□ 1.41
SS18-218ENST00000581021 LRRC47Q8N1G4 583 aaKnown RBP23.88■■□□□ 1.41
SS18-218ENST00000581021 NUP88Q99567 741 aaPredicted RBP23.88■■□□□ 1.41
SS18-218ENST00000581021 DSCC1Q9BVC3 393 aa23.88■■□□□ 1.41
SS18-218ENST00000581021 PORCNQ9H237 461 aa23.88■■□□□ 1.41
SS18-218ENST00000581021 BTBD7Q9P203 1132 aa23.88■■□□□ 1.41
SS18-218ENST00000581021 CLIP2Q9UDT6 1046 aa23.88■■□□□ 1.41
SS18-218ENST00000581021 NEDD4P46934 1319 aa23.87■■□□□ 1.41
SS18-218ENST00000581021 RAD50Q92878 1312 aa23.87■■□□□ 1.41
SS18-218ENST00000581021 TNPO2O14787 897 aaKnown RBP23.87■■□□□ 1.41
SS18-218ENST00000581021 WDR46O15213 610 aaKnown RBP23.87■■□□□ 1.41
SS18-218ENST00000581021 NDUFB10O96000 172 aa23.87■■□□□ 1.41
SS18-218ENST00000581021 NEFLP07196 543 aa23.87■■□□□ 1.41
SS18-218ENST00000581021 ERVK-9P63128 1117 aa23.87■■□□□ 1.41
SS18-218ENST00000581021 ERVK-24P63145 666 aa23.87■■□□□ 1.41
SS18-218ENST00000581021 GPRC5AQ8NFJ5 357 aa23.87■■□□□ 1.41
SS18-218ENST00000581021 ARMC5Q96C12 935 aa23.87■■□□□ 1.41
SS18-218ENST00000581021 FBXO28Q9NVF7 368 aa23.87■■□□□ 1.41
SS18-218ENST00000581021 MYH4Q9Y623 1939 aa23.86■■□□□ 1.41
SS18-218ENST00000581021 DOCK3Q8IZD9 2030 aa23.86■■□□□ 1.41
SS18-218ENST00000581021 FAM83BQ5T0W9 1011 aa23.86■■□□□ 1.41
SS18-218ENST00000581021 SH3TC2Q8TF17 1288 aa23.86■■□□□ 1.41
SS18-218ENST00000581021 MKL1Q969V6 931 aa23.86■■□□□ 1.41
SS18-218ENST00000581021 GOPCQ9HD26 462 aa23.86■■□□□ 1.41
SS18-218ENST00000581021 PLXNB2O15031 1838 aa23.85■■□□□ 1.41
SS18-218ENST00000581021 F5H6K3 240 aa23.85■■□□□ 1.41
SS18-218ENST00000581021 RANBP6O60518 1105 aaKnown RBP23.85■■□□□ 1.41
SS18-218ENST00000581021 TTLL1O95922 423 aa23.85■■□□□ 1.41
SS18-218ENST00000581021 FLT3LGP49771 235 aa23.85■■□□□ 1.41
SS18-218ENST00000581021 PRMT2P55345 433 aa23.85■■□□□ 1.41
SS18-218ENST00000581021 SOX10P56693 466 aa23.85■■□□□ 1.41
SS18-218ENST00000581021 PTH1RQ03431 593 aa23.85■■□□□ 1.41
SS18-218ENST00000581021 KLRC3Q07444 240 aa23.85■■□□□ 1.41
SS18-218ENST00000581021 COG2Q14746 738 aa23.85■■□□□ 1.41
SS18-218ENST00000581021 GTF3C2Q8WUA4 911 aaPredicted RBP23.85■■□□□ 1.41
SS18-218ENST00000581021 STAG1Q8WVM7 1258 aa23.85■■□□□ 1.41
SS18-218ENST00000581021 RABGAP1Q9Y3P9 1069 aa23.85■■□□□ 1.41
SS18-218ENST00000581021 TSPY2A6NKD2 308 aa23.84■■□□□ 1.41
SS18-218ENST00000581021 SGSM2O43147 1006 aa23.84■■□□□ 1.41
SS18-218ENST00000581021 RAD21O60216 631 aa23.84■■□□□ 1.41
SS18-218ENST00000581021 FLOT1O75955 427 aa23.84■■□□□ 1.41
SS18-218ENST00000581021 NOVP48745 357 aa23.84■■□□□ 1.41
SS18-218ENST00000581021 RRP12Q5JTH9 1297 aaKnown RBP23.84■■□□□ 1.41
SS18-218ENST00000581021 AKNAD1Q5T1N1 836 aa23.84■■□□□ 1.41
SS18-218ENST00000581021 RASGRP2Q7LDG7 609 aa23.84■■□□□ 1.41
SS18-218ENST00000581021 ATG4CQ96DT6 458 aa23.84■■□□□ 1.41
SS18-218ENST00000581021 ZNF333Q96JL9 665 aa23.84■■□□□ 1.41
SS18-218ENST00000581021 CENPBP07199 599 aaPredicted RBP23.83■■□□□ 1.41
SS18-218ENST00000581021 DSG3P32926 999 aa23.83■■□□□ 1.41
SS18-218ENST00000581021 SLC9C1Q4G0N8 1177 aa23.83■■□□□ 1.41
SS18-218ENST00000581021 BMP2KLQ5H9B9 411 aa23.83■■□□□ 1.41
SS18-218ENST00000581021 TOMM22Q9NS69 142 aa23.83■■□□□ 1.41
SS18-218ENST00000581021 GJD2Q9UKL4 321 aa23.83■■□□□ 1.41
SS18-218ENST00000581021 HOXD10P28358 340 aa23.82■■□□□ 1.4
SS18-218ENST00000581021 ZNF213O14771 459 aa23.81■■□□□ 1.4
SS18-218ENST00000581021 SAMD1Q6SPF0 538 aaPredicted RBP23.81■■□□□ 1.4
SS18-218ENST00000581021 MFSD6Q6ZSS7 791 aa23.81■■□□□ 1.4
SS18-218ENST00000581021 GMCL1P1Q8NEA9 526 aa23.81■■□□□ 1.4
SS18-218ENST00000581021 RAET1EQ8TD07 263 aa23.81■■□□□ 1.4
SS18-218ENST00000581021 COA7Q96BR5 231 aa23.81■■□□□ 1.4
SS18-218ENST00000581021 HOXC10Q9NYD6 342 aa23.81■■□□□ 1.4
SS18-218ENST00000581021 SYNPO2Q9UMS6 1093 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms