RNA–Protein interactions for RNA: ENST00000580597.2

RN7SL339P-201, Transcript of RNA, 7SL, cytoplasmic 339, pseudogene, humanhuman

BASIC

Gene RN7SL339P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL339P-201ENST00000580597 IMPDH2P12268 514 aa8.44□□□□□ -1.06
RN7SL339P-201ENST00000580597 NME1P15531 152 aaKnown RBP8.44□□□□□ -1.06
RN7SL339P-201ENST00000580597 RASGRP4Q8TDF6 673 aa8.44□□□□□ -1.06
RN7SL339P-201ENST00000580597 SPATA32Q96LK8 384 aa8.44□□□□□ -1.06
RN7SL339P-201ENST00000580597 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.44□□□□□ -1.06
RN7SL339P-201ENST00000580597 DUSP15Q9H1R2 295 aaPredicted RBP8.44□□□□□ -1.06
RN7SL339P-201ENST00000580597 ANTXR1Q9H6X2 564 aa8.44□□□□□ -1.06
RN7SL339P-201ENST00000580597 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.44□□□□□ -1.06
RN7SL339P-201ENST00000580597 POLR2BP30876 1174 aaKnown RBP8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 RNF4P78317 190 aa8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 RAD51AP2Q09MP3 1159 aa8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 COL9A2Q14055 689 aaPredicted RBP8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 C9orf131Q5VYM1 1079 aa8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 TMPRSS7Q7RTY8 843 aa8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 LRRN4CLQ8ND94 238 aa8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 UBE2FQ969M7 185 aa8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 TRIT1Q9H3H1 467 aaKnown RBP8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 CARS2Q9HA77 564 aaKnown RBP8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 RC3H2Q9HBD1 1191 aaKnown RBP8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 ZSWIM5Q9P217 1185 aa8.43□□□□□ -1.06
RN7SL339P-201ENST00000580597 LRRN2O75325 713 aa8.42□□□□□ -1.06
RN7SL339P-201ENST00000580597 GJA8P48165 433 aa8.42□□□□□ -1.06
RN7SL339P-201ENST00000580597 GAB4Q2WGN9 574 aa8.42□□□□□ -1.06
RN7SL339P-201ENST00000580597 TGIF2Q9GZN2 237 aa8.42□□□□□ -1.06
RN7SL339P-201ENST00000580597 PRDM7Q9NQW5 492 aa8.42□□□□□ -1.06
RN7SL339P-201ENST00000580597 ESR1P03372 595 aa8.41□□□□□ -1.06
RN7SL339P-201ENST00000580597 JUNBP17275 347 aaPredicted RBP8.41□□□□□ -1.06
RN7SL339P-201ENST00000580597 TAB3Q8N5C8 712 aaPredicted RBP8.41□□□□□ -1.06
RN7SL339P-201ENST00000580597 RBBP8NLQ8NC74 664 aaPredicted RBP8.41□□□□□ -1.06
RN7SL339P-201ENST00000580597 GPRASP2Q96D09 838 aa8.41□□□□□ -1.06
RN7SL339P-201ENST00000580597 FERD3LQ96RJ6 166 aa8.41□□□□□ -1.06
RN7SL339P-201ENST00000580597 GPATCH2Q9NW75 528 aa8.41□□□□□ -1.06
RN7SL339P-201ENST00000580597 PAPLNO95428 1278 aa8.4□□□□□ -1.06
RN7SL339P-201ENST00000580597 SOX9P48436 509 aa8.4□□□□□ -1.06
RN7SL339P-201ENST00000580597 INTS3Q68E01 1043 aaKnown RBP8.4□□□□□ -1.06
RN7SL339P-201ENST00000580597 ATG4DQ86TL0 474 aaPredicted RBP8.4□□□□□ -1.06
RN7SL339P-201ENST00000580597 TSPYL5Q86VY4 417 aaPredicted RBP8.4□□□□□ -1.06
RN7SL339P-201ENST00000580597 FLAD1Q8NFF5 587 aa8.4□□□□□ -1.06
RN7SL339P-201ENST00000580597 ZNF428Q96B54 188 aa8.4□□□□□ -1.06
RN7SL339P-201ENST00000580597 PODXL2Q9NZ53 605 aa8.4□□□□□ -1.06
RN7SL339P-201ENST00000580597 ERCC6Q03468 1493 aa8.39□□□□□ -1.07
RN7SL339P-201ENST00000580597 TPP2P29144 1249 aaPredicted RBP8.39□□□□□ -1.07
RN7SL339P-201ENST00000580597 CHMP4BP1P59074 171 aa8.39□□□□□ -1.07
RN7SL339P-201ENST00000580597 NBPF12Q5TAG4 269 aaPredicted RBP8.39□□□□□ -1.07
RN7SL339P-201ENST00000580597 SLC9A7Q96T83 725 aa8.39□□□□□ -1.07
RN7SL339P-201ENST00000580597 TM9SF2Q99805 663 aa8.39□□□□□ -1.07
RN7SL339P-201ENST00000580597 GINM1Q9NU53 330 aa8.39□□□□□ -1.07
RN7SL339P-201ENST00000580597 PPT2Q9UMR5 302 aa8.39□□□□□ -1.07
RN7SL339P-201ENST00000580597 WASH4PA8MWX3 477 aa8.38□□□□□ -1.07
RN7SL339P-201ENST00000580597 CLEC3AO75596 197 aa8.38□□□□□ -1.07
RN7SL339P-201ENST00000580597 ACRP10323 421 aa8.38□□□□□ -1.07
RN7SL339P-201ENST00000580597 TMEM192Q8IY95 271 aa8.38□□□□□ -1.07
RN7SL339P-201ENST00000580597 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
RN7SL339P-201ENST00000580597 MYO15BQ96JP2 1530 aa8.38□□□□□ -1.07
RN7SL339P-201ENST00000580597 SHISA3A0PJX4 238 aa8.37□□□□□ -1.07
RN7SL339P-201ENST00000580597 BIN1O00499 593 aa8.37□□□□□ -1.07
RN7SL339P-201ENST00000580597 NBPF9Q3BBW0 867 aa8.37□□□□□ -1.07
RN7SL339P-201ENST00000580597 SLC6A18Q96N87 628 aa8.37□□□□□ -1.07
RN7SL339P-201ENST00000580597 ALPK1Q96QP1 1244 aa8.37□□□□□ -1.07
RN7SL339P-201ENST00000580597 DUSP13Q9UII6 198 aa8.37□□□□□ -1.07
RN7SL339P-201ENST00000580597 CTNND2Q9UQB3 1225 aa8.37□□□□□ -1.07
RN7SL339P-201ENST00000580597 EFR3BQ9Y2G0 817 aa8.37□□□□□ -1.07
RN7SL339P-201ENST00000580597 PAX4O43316 350 aa8.36□□□□□ -1.07
RN7SL339P-201ENST00000580597 TCF3P15923 654 aa8.36□□□□□ -1.07
RN7SL339P-201ENST00000580597 LSRQ86X29 649 aaPredicted RBP8.36□□□□□ -1.07
RN7SL339P-201ENST00000580597 CREG2Q8IUH2 290 aa8.36□□□□□ -1.07
RN7SL339P-201ENST00000580597 ENOX1Q8TC92 643 aaKnown RBP8.36□□□□□ -1.07
RN7SL339P-201ENST00000580597 ACBD3Q9H3P7 528 aa8.36□□□□□ -1.07
RN7SL339P-201ENST00000580597 CCSER2Q9H7U1 834 aa8.36□□□□□ -1.07
RN7SL339P-201ENST00000580597 C19orf73Q9NVV2 129 aa8.36□□□□□ -1.07
RN7SL339P-201ENST00000580597 NMIQ13287 307 aaPredicted RBP8.35□□□□□ -1.07
RN7SL339P-201ENST00000580597 SYTL5Q8TDW5 730 aaPredicted RBP8.35□□□□□ -1.07
RN7SL339P-201ENST00000580597 CCDC120Q96HB5 630 aa8.35□□□□□ -1.07
RN7SL339P-201ENST00000580597 FMNL2Q96PY5 1086 aa8.35□□□□□ -1.07
RN7SL339P-201ENST00000580597 HDAC8Q9BY41 377 aa8.35□□□□□ -1.07
RN7SL339P-201ENST00000580597 GUCY2CP25092 1073 aa8.34□□□□□ -1.07
RN7SL339P-201ENST00000580597 FBXW10Q5XX13 1052 aa8.34□□□□□ -1.07
RN7SL339P-201ENST00000580597 CCDC81Q6ZN84 652 aa8.34□□□□□ -1.07
RN7SL339P-201ENST00000580597 ASIC4Q96FT7 647 aa8.34□□□□□ -1.07
RN7SL339P-201ENST00000580597 SEC16BQ96JE7 1060 aa8.34□□□□□ -1.07
RN7SL339P-201ENST00000580597 ZNF512BQ96KM6 892 aaPredicted RBP8.34□□□□□ -1.07
RN7SL339P-201ENST00000580597 DHRS1Q96LJ7 313 aa8.34□□□□□ -1.07
RN7SL339P-201ENST00000580597 SUCOQ9UBS9 1254 aaKnown RBP8.34□□□□□ -1.07
RN7SL339P-201ENST00000580597 PCDHA11Q9Y5I1 949 aa8.34□□□□□ -1.07
RN7SL339P-201ENST00000580597 LTKP29376 864 aa8.33□□□□□ -1.08
RN7SL339P-201ENST00000580597 GDNFP39905 211 aa8.33□□□□□ -1.08
RN7SL339P-201ENST00000580597 GIPRP48546 466 aa8.33□□□□□ -1.08
RN7SL339P-201ENST00000580597 EGR3Q06889 387 aa8.33□□□□□ -1.08
RN7SL339P-201ENST00000580597 SNW1Q13573 536 aaKnown RBP8.33□□□□□ -1.08
RN7SL339P-201ENST00000580597 CLEC16AQ2KHT3 1053 aa8.33□□□□□ -1.08
RN7SL339P-201ENST00000580597 DAGLBQ8NCG7 672 aa8.33□□□□□ -1.08
RN7SL339P-201ENST00000580597 ASCC2Q9H1I8 757 aaPredicted RBP8.33□□□□□ -1.08
RN7SL339P-201ENST00000580597 SLAMF8Q9P0V8 285 aa8.33□□□□□ -1.08
RN7SL339P-201ENST00000580597 INPP5FQ9Y2H2 1132 aa8.33□□□□□ -1.08
RN7SL339P-201ENST00000580597 CARMIL2Q6F5E8 1435 aa8.32□□□□□ -1.08
RN7SL339P-201ENST00000580597 DNAJC25-GNG10A0A024R161 153 aa8.32□□□□□ -1.08
RN7SL339P-201ENST00000580597 ERCC5P28715 1186 aaPredicted RBP8.32□□□□□ -1.08
RN7SL339P-201ENST00000580597 RBM25P49756 843 aaKnown RBP8.32□□□□□ -1.08
RN7SL339P-201ENST00000580597 PMS1P54277 932 aaKnown RBP8.32□□□□□ -1.08
RN7SL339P-201ENST00000580597 RUFY4Q6ZNE9 571 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms