RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 Q3C1V9 767 aa19.82■□□□□ 0.76
SREBF1-219ENST00000580540 KIAA1755Q5JYT7 1200 aa19.82■□□□□ 0.76
SREBF1-219ENST00000580540 TMX2Q9Y320 296 aa19.82■□□□□ 0.76
SREBF1-219ENST00000580540 KIAA0100Q14667 2235 aaKnown RBP19.82■□□□□ 0.76
SREBF1-219ENST00000580540 A0A0D9SFI3 127 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 EN2P19622 333 aaPredicted RBP19.81■□□□□ 0.76
SREBF1-219ENST00000580540 PDE4BQ07343 736 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 PPARAQ07869 468 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 MTFR1Q15390 333 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 MCMDC2Q4G0Z9 681 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 VPS53Q5VIR6 699 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 SLAIN1Q8ND83 568 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 OSBPL3Q9H4L5 887 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 VCPKMTQ9H867 229 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 RABGAP1Q9Y3P9 1069 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 DOCK3Q8IZD9 2030 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 ROBO3Q96MS0 1386 aa19.81■□□□□ 0.76
SREBF1-219ENST00000580540 UBXN2AP68543 259 aa19.8■□□□□ 0.76
SREBF1-219ENST00000580540 COG2Q14746 738 aa19.8■□□□□ 0.76
SREBF1-219ENST00000580540 WDR78Q5VTH9 848 aa19.8■□□□□ 0.76
SREBF1-219ENST00000580540 POTEEQ6S8J3 1075 aa19.8■□□□□ 0.76
SREBF1-219ENST00000580540 LPAR1Q92633 364 aa19.8■□□□□ 0.76
SREBF1-219ENST00000580540 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.8■□□□□ 0.76
SREBF1-219ENST00000580540 PORCNQ9H237 461 aa19.8■□□□□ 0.76
SREBF1-219ENST00000580540 SPDYE16A6NNV3 312 aaPredicted RBP19.79■□□□□ 0.76
SREBF1-219ENST00000580540 SDSP20132 328 aa19.79■□□□□ 0.76
SREBF1-219ENST00000580540 MAPK4P31152 587 aa19.79■□□□□ 0.76
SREBF1-219ENST00000580540 CTDSPL2Q05D32 466 aa19.79■□□□□ 0.76
SREBF1-219ENST00000580540 GOPCQ9HD26 462 aa19.79■□□□□ 0.76
SREBF1-219ENST00000580540 HOXC10Q9NYD6 342 aa19.79■□□□□ 0.76
SREBF1-219ENST00000580540 FOXP2O15409 715 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 CNMDO75829 334 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 FLOT1O75955 427 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 TSPY3P0CV98 308 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 TSPY8P0CW00 308 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 CYP2B6P20813 491 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 CCNA1P78396 465 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 IRF5Q13568 498 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 FAM47AQ5JRC9 791 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 BTBD7Q9P203 1132 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 CLIP2Q9UDT6 1046 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 GJD2Q9UKL4 321 aa19.78■□□□□ 0.76
SREBF1-219ENST00000580540 CENPFP49454 3210 aa19.77■□□□□ 0.76
SREBF1-219ENST00000580540 WDR46O15213 610 aaKnown RBP19.77■□□□□ 0.76
SREBF1-219ENST00000580540 INHAP05111 366 aa19.77■□□□□ 0.76
SREBF1-219ENST00000580540 CCL5P13501 91 aa19.77■□□□□ 0.76
SREBF1-219ENST00000580540 PDE4AP27815 886 aa19.77■□□□□ 0.76
SREBF1-219ENST00000580540 PLEKHH3Q7Z736 793 aa19.77■□□□□ 0.76
SREBF1-219ENST00000580540 ZNF589Q86UQ0 364 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-219ENST00000580540 TICAM2Q86XR7 235 aa19.77■□□□□ 0.76
SREBF1-219ENST00000580540 PXYLP1Q8TE99 480 aa19.77■□□□□ 0.76
SREBF1-219ENST00000580540 NUDT12Q9BQG2 462 aa19.77■□□□□ 0.76
SREBF1-219ENST00000580540 RNF208Q9H0X6 261 aa19.77■□□□□ 0.76
SREBF1-219ENST00000580540 INCENPQ9NQS7 918 aa19.77■□□□□ 0.76
SREBF1-219ENST00000580540 DIAPH3Q9NSV4 1193 aa19.77■□□□□ 0.76
SREBF1-219ENST00000580540 TFAP4Q01664 338 aa19.76■□□□□ 0.75
SREBF1-219ENST00000580540 PLS1Q14651 629 aa19.76■□□□□ 0.75
SREBF1-219ENST00000580540 CWC27Q6UX04 472 aaKnown RBP19.76■□□□□ 0.75
SREBF1-219ENST00000580540 GPR142Q7Z601 462 aa19.76■□□□□ 0.75
SREBF1-219ENST00000580540 NYAP2Q9P242 653 aa19.76■□□□□ 0.75
SREBF1-219ENST00000580540 CCDC171Q6TFL3 1326 aa19.76■□□□□ 0.75
SREBF1-219ENST00000580540 FGAP02671 866 aa19.75■□□□□ 0.75
SREBF1-219ENST00000580540 HSPD1P10809 573 aaKnown RBP19.75■□□□□ 0.75
SREBF1-219ENST00000580540 DSG3P32926 999 aa19.75■□□□□ 0.75
SREBF1-219ENST00000580540 ALX1Q15699 326 aa19.75■□□□□ 0.75
SREBF1-219ENST00000580540 FAM83BQ5T0W9 1011 aa19.75■□□□□ 0.75
SREBF1-219ENST00000580540 LBX2Q6XYB7 198 aa19.75■□□□□ 0.75
SREBF1-219ENST00000580540 ATG4CQ96DT6 458 aa19.75■□□□□ 0.75
SREBF1-219ENST00000580540 CEP95Q96GE4 821 aa19.75■□□□□ 0.75
SREBF1-219ENST00000580540 UNC93B1Q9H1C4 597 aa19.75■□□□□ 0.75
SREBF1-219ENST00000580540 TOMM22Q9NS69 142 aa19.75■□□□□ 0.75
SREBF1-219ENST00000580540 IGKV6D-41A0A0C4DH26 115 aa19.74■□□□□ 0.75
SREBF1-219ENST00000580540 MFAP1P55081 439 aaKnown RBP19.74■□□□□ 0.75
SREBF1-219ENST00000580540 NEDD1Q8NHV4 660 aa19.74■□□□□ 0.75
SREBF1-219ENST00000580540 SOCS4Q8WXH5 440 aa19.74■□□□□ 0.75
SREBF1-219ENST00000580540 NUP88Q99567 741 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-219ENST00000580540 FBXO28Q9NVF7 368 aa19.74■□□□□ 0.75
SREBF1-219ENST00000580540 IVNS1ABPQ9Y6Y0 642 aa19.74■□□□□ 0.75
SREBF1-219ENST00000580540 TSPY2A6NKD2 308 aa19.73■□□□□ 0.75
SREBF1-219ENST00000580540 F5H6K3 240 aa19.73■□□□□ 0.75
SREBF1-219ENST00000580540 HIP1O00291 1037 aa19.73■□□□□ 0.75
SREBF1-219ENST00000580540 RANBP6O60518 1105 aaKnown RBP19.73■□□□□ 0.75
SREBF1-219ENST00000580540 TTLL1O95922 423 aa19.73■□□□□ 0.75
SREBF1-219ENST00000580540 HAND2P61296 217 aa19.73■□□□□ 0.75
SREBF1-219ENST00000580540 KLRC3Q07444 240 aa19.73■□□□□ 0.75
SREBF1-219ENST00000580540 RRP12Q5JTH9 1297 aaKnown RBP19.73■□□□□ 0.75
SREBF1-219ENST00000580540 LRRC47Q8N1G4 583 aaKnown RBP19.73■□□□□ 0.75
SREBF1-219ENST00000580540 MTMR4Q9NYA4 1195 aa19.73■□□□□ 0.75
SREBF1-219ENST00000580540 ISY1Q9ULR0 285 aaKnown RBP19.73■□□□□ 0.75
SREBF1-219ENST00000580540 NDUFB10O96000 172 aa19.72■□□□□ 0.75
SREBF1-219ENST00000580540 HMGCRP04035 888 aa19.72■□□□□ 0.75
SREBF1-219ENST00000580540 RGS2P41220 211 aa19.72■□□□□ 0.75
SREBF1-219ENST00000580540 TTC22Q5TAA0 569 aa19.72■□□□□ 0.75
SREBF1-219ENST00000580540 MB21D1Q8N884 522 aa19.72■□□□□ 0.75
SREBF1-219ENST00000580540 CHMP4CQ96CF2 233 aa19.72■□□□□ 0.75
SREBF1-219ENST00000580540 MOV10L1Q9BXT6 1211 aaKnown RBP19.72■□□□□ 0.75
SREBF1-219ENST00000580540 SPATC1LQ9H0A9 340 aa19.72■□□□□ 0.75
SREBF1-219ENST00000580540 ANAPC4Q9UJX5 808 aa19.72■□□□□ 0.75
SREBF1-219ENST00000580540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.72■□□□□ 0.75
SREBF1-219ENST00000580540 GJB1P08034 283 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms