RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 STAP2Q9UGK3 403 aa15.19■□□□□ 0.02
SSH2-205ENST00000577483 MINDY4BA8MYZ0 360 aa15.18■□□□□ 0.02
SSH2-205ENST00000577483 IGHDP01880 384 aa15.18■□□□□ 0.02
SSH2-205ENST00000577483 LBX2Q6XYB7 198 aa15.18■□□□□ 0.02
SSH2-205ENST00000577483 LNPKQ9C0E8 428 aa15.18■□□□□ 0.02
SSH2-205ENST00000577483 ARHGEF10LQ9HCE6 1279 aa15.18■□□□□ 0.02
SSH2-205ENST00000577483 BTBD7Q9P203 1132 aa15.18■□□□□ 0.02
SSH2-205ENST00000577483 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
SSH2-205ENST00000577483 TMX2Q9Y320 296 aa15.18■□□□□ 0.02
SSH2-205ENST00000577483 FOXP2O15409 715 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 GJB1P08034 283 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 EEF2P13639 858 aaKnown RBP15.17■□□□□ 0.02
SSH2-205ENST00000577483 GNAT2P19087 354 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 RASA1P20936 1047 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 GJA8P48165 433 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 TDO2P48775 406 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 TRIM32Q13049 653 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 LRRFIP1Q32MZ4 808 aaKnown RBP15.17■□□□□ 0.02
SSH2-205ENST00000577483 PRPF38BQ5VTL8 546 aaKnown RBP15.17■□□□□ 0.02
SSH2-205ENST00000577483 CCDC129Q6ZRS4 1044 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 GPR142Q7Z601 462 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 IFNL3Q8IZI9 196 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 SPICE1Q8N0Z3 855 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 TRIB2Q92519 343 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 RABGAP1Q9Y3P9 1069 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 SUPT16HQ9Y5B9 1047 aaKnown RBP15.17■□□□□ 0.02
SSH2-205ENST00000577483 PATL2C9JE40 543 aaKnown RBP15.17■□□□□ 0.02
SSH2-205ENST00000577483 CYP2B6P20813 491 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 MAPK4P31152 587 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 B4GALNT3Q6L9W6 998 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 TANGO6Q9C0B7 1094 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 VCPKMTQ9H867 229 aa15.17■□□□□ 0.02
SSH2-205ENST00000577483 HMGCRP04035 888 aa15.16■□□□□ 0.02
SSH2-205ENST00000577483 APPP05067 770 aa15.16■□□□□ 0.02
SSH2-205ENST00000577483 U2AF1L4Q8WU68 220 aaKnown RBP15.16■□□□□ 0.02
SSH2-205ENST00000577483 SOCS4Q8WXH5 440 aa15.16■□□□□ 0.02
SSH2-205ENST00000577483 LPAR1Q92633 364 aa15.16■□□□□ 0.02
SSH2-205ENST00000577483 USP6NLQ92738 828 aa15.16■□□□□ 0.02
SSH2-205ENST00000577483 NUDT12Q9BQG2 462 aa15.16■□□□□ 0.02
SSH2-205ENST00000577483 KANSL2Q9H9L4 492 aa15.16■□□□□ 0.02
SSH2-205ENST00000577483 PAK6Q9NQU5 681 aaPredicted RBP15.16■□□□□ 0.02
SSH2-205ENST00000577483 PRDM1O75626 825 aa15.15■□□□□ 0.02
SSH2-205ENST00000577483 ATP2B2Q01814 1243 aa15.15■□□□□ 0.02
SSH2-205ENST00000577483 COG2Q14746 738 aa15.15■□□□□ 0.02
SSH2-205ENST00000577483 MORN1Q5T089 497 aa15.15■□□□□ 0.02
SSH2-205ENST00000577483 EVI5LQ96CN4 794 aa15.15■□□□□ 0.02
SSH2-205ENST00000577483 RWDD1Q9H446 243 aaPredicted RBP15.15■□□□□ 0.02
SSH2-205ENST00000577483 SH2D4AQ9H788 454 aa15.15■□□□□ 0.02
SSH2-205ENST00000577483 WDR46O15213 610 aaKnown RBP15.14■□□□□ 0.01
SSH2-205ENST00000577483 PLEKHH3Q7Z736 793 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 UBE2Q1Q7Z7E8 422 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 NKX2-3Q8TAU0 364 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 IGKV6D-41A0A0C4DH26 115 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 FLOT1O75955 427 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 SGPL1O95470 568 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 XRCC5P13010 732 aaKnown RBP15.14■□□□□ 0.01
SSH2-205ENST00000577483 CCNA1P78396 465 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 CCL14Q16627 93 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 VPS53Q5VIR6 699 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 CHD1LQ86WJ1 897 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 CCAR1Q8IX12 1150 aaKnown RBP15.14■□□□□ 0.01
SSH2-205ENST00000577483 DEFB118Q96PH6 123 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.14■□□□□ 0.01
SSH2-205ENST00000577483 NAPBQ9H115 298 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 MKNK2Q9HBH9 465 aa15.14■□□□□ 0.01
SSH2-205ENST00000577483 PLIN4Q96Q06 1357 aa15.13■□□□□ 0.01
SSH2-205ENST00000577483 A0A0D9SFI3 127 aa15.13■□□□□ 0.01
SSH2-205ENST00000577483 DSG3P32926 999 aa15.13■□□□□ 0.01
SSH2-205ENST00000577483 NUCB1Q02818 461 aa15.13■□□□□ 0.01
SSH2-205ENST00000577483 PPARAQ07869 468 aa15.13■□□□□ 0.01
SSH2-205ENST00000577483 WDR78Q5VTH9 848 aa15.13■□□□□ 0.01
SSH2-205ENST00000577483 ATG4CQ96DT6 458 aa15.13■□□□□ 0.01
SSH2-205ENST00000577483 FAM227BQ96M60 508 aa15.13■□□□□ 0.01
SSH2-205ENST00000577483 APBA2Q99767 749 aa15.13■□□□□ 0.01
SSH2-205ENST00000577483 MOV10L1Q9BXT6 1211 aaKnown RBP15.13■□□□□ 0.01
SSH2-205ENST00000577483 FBXO28Q9NVF7 368 aa15.13■□□□□ 0.01
SSH2-205ENST00000577483 RGS2P41220 211 aa15.12■□□□□ 0.01
SSH2-205ENST00000577483 MAP2K5Q13163 448 aa15.12■□□□□ 0.01
SSH2-205ENST00000577483 MAP3K21Q5TCX8 1036 aa15.12■□□□□ 0.01
SSH2-205ENST00000577483 PLEKHM2Q8IWE5 1019 aa15.12■□□□□ 0.01
SSH2-205ENST00000577483 NACAP1Q9BZK3 213 aa15.12■□□□□ 0.01
SSH2-205ENST00000577483 HOXC10Q9NYD6 342 aa15.12■□□□□ 0.01
SSH2-205ENST00000577483 RPTORQ8N122 1335 aa15.12■□□□□ 0.01
SSH2-205ENST00000577483 MCM3APO60318 1980 aa15.11■□□□□ 0.01
SSH2-205ENST00000577483 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
SSH2-205ENST00000577483 PTPREP23469 700 aa15.11■□□□□ 0.01
SSH2-205ENST00000577483 GRB14Q14449 540 aa15.11■□□□□ 0.01
SSH2-205ENST00000577483 FAM83BQ5T0W9 1011 aa15.11■□□□□ 0.01
SSH2-205ENST00000577483 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
SSH2-205ENST00000577483 CEP95Q96GE4 821 aa15.11■□□□□ 0.01
SSH2-205ENST00000577483 NUP88Q99567 741 aaPredicted RBP15.11■□□□□ 0.01
SSH2-205ENST00000577483 SPATC1LQ9H0A9 340 aa15.11■□□□□ 0.01
SSH2-205ENST00000577483 CRISPLD2Q9H0B8 497 aa15.11■□□□□ 0.01
SSH2-205ENST00000577483 CWC22Q9HCG8 908 aaKnown RBP15.11■□□□□ 0.01
SSH2-205ENST00000577483 GOPCQ9HD26 462 aa15.11■□□□□ 0.01
SSH2-205ENST00000577483 FLRT1Q9NZU1 646 aa15.11■□□□□ 0.01
SSH2-205ENST00000577483 NYAP2Q9P242 653 aa15.11■□□□□ 0.01
SSH2-205ENST00000577483 SMCHD1A6NHR9 2005 aa15.11■□□□□ 0.01
SSH2-205ENST00000577483 RAD21O60216 631 aa15.1■□□□□ 0.01
SSH2-205ENST00000577483 FARP2O94887 1054 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms