RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ZNF669Q96BR6 464 aaPredicted RBP3.85□□□□□ -1.79
COPS3-213ENST00000577210 KIF2CQ99661 725 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 GBP3Q9H0R5 595 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 TRIT1Q9H3H1 467 aaKnown RBP3.85□□□□□ -1.79
COPS3-213ENST00000577210 PIM2Q9P1W9 311 aa3.85□□□□□ -1.79
COPS3-213ENST00000577210 SUCOQ9UBS9 1254 aaKnown RBP3.85□□□□□ -1.79
COPS3-213ENST00000577210 A0A1W2PQH9 124 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 IQCA1LA6NCM1 817 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 AGRPO00253 132 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 CLCN7P51798 805 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 CDK5R2Q13319 367 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 ANKRD39Q53RE8 183 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 UNC5AQ6ZN44 842 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 EEPD1Q7L9B9 569 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 STK11IPQ8N1F8 1099 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 MISP3Q96FF7 219 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 MFSD14AQ96MC6 490 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 KREMEN1Q96MU8 473 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 SLC9A7Q96T83 725 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 GPATCH2Q9NW75 528 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 ZNF214Q9UL59 606 aaPredicted RBP3.84□□□□□ -1.79
COPS3-213ENST00000577210 SNX11Q9Y5W9 270 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 MRVI1Q9Y6F6 885 aa3.84□□□□□ -1.79
COPS3-213ENST00000577210 OAS3Q9Y6K5 1087 aaKnown RBP3.84□□□□□ -1.79
COPS3-213ENST00000577210 ARID1BQ8NFD5 2236 aaPredicted RBP3.83□□□□□ -1.8
COPS3-213ENST00000577210 TMEM265A0A087WTH1 108 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 A0A087WZG4 1122 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 PRR19A6NJB7 356 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 UPK3BL1B0FP48 263 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 FAM155AB1AL88 458 aaPredicted RBP3.83□□□□□ -1.8
COPS3-213ENST00000577210 WDR64B1ANS9 1081 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 UPK3BL2E5RIL1 263 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 CYP26A1O43174 497 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 SLITRK5O94991 958 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 ZNF865P0CJ78 1059 aaPredicted RBP3.83□□□□□ -1.8
COPS3-213ENST00000577210 YBX3P16989 372 aaKnown RBP eCLIP3.83□□□□□ -1.85e-7■■■■□ 20.4
COPS3-213ENST00000577210 SPINK2P20155 84 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 ETFBP38117 255 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 GNPTABQ3T906 1256 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 NBPF12Q5TAG4 269 aaPredicted RBP3.83□□□□□ -1.8
COPS3-213ENST00000577210 POMZP3Q6PJE2 187 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 VHLLQ6RSH7 139 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 THAP5Q7Z6K1 395 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 CCDC144CPQ8IYA2 1237 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 MFSD4AQ8N468 514 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 FBXL6Q8N531 539 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 ST13P5Q8NFI4 369 aaPredicted RBP3.83□□□□□ -1.8
COPS3-213ENST00000577210 DNAJB8Q8NHS0 232 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 SHKBP1Q8TBC3 707 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 BAHD1Q8TBE0 780 aaPredicted RBP3.83□□□□□ -1.8
COPS3-213ENST00000577210 XAGE3Q8WTP9 111 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 SYTL4Q96C24 671 aaPredicted RBP3.83□□□□□ -1.8
COPS3-213ENST00000577210 SLC6A18Q96N87 628 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 DPH2Q9BQC3 489 aaPredicted RBP3.83□□□□□ -1.8
COPS3-213ENST00000577210 MKRN2Q9H000 416 aaKnown RBP3.83□□□□□ -1.8
COPS3-213ENST00000577210 LGR6Q9HBX8 967 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 PCDHB12Q9Y5F1 795 aa3.83□□□□□ -1.8
COPS3-213ENST00000577210 ANKRD34BA5PLL1 514 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 DYNC1LI2O43237 492 aaPredicted RBP3.82□□□□□ -1.8
COPS3-213ENST00000577210 KLF4O43474 513 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 PPM1BO75688 479 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 DDAH1O94760 285 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 UBOX5O94941 541 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 EOMESO95936 686 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 F13BP05160 661 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 FOSL1P15407 271 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 IFRD2Q12894 506 aaPredicted RBP3.82□□□□□ -1.8
COPS3-213ENST00000577210 IFI16Q16666 785 aaKnown RBP3.82□□□□□ -1.8
COPS3-213ENST00000577210 DDR2Q16832 855 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 CLEC16AQ2KHT3 1053 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 ZC3H12BQ5HYM0 836 aaKnown RBP3.82□□□□□ -1.8
COPS3-213ENST00000577210 HEATR6Q6AI08 1181 aaKnown RBP3.82□□□□□ -1.8
COPS3-213ENST00000577210 ZNF765Q7L2R6 523 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 NOP9Q86U38 636 aaKnown RBP3.82□□□□□ -1.8
COPS3-213ENST00000577210 CDH24Q86UP0 819 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 C7orf61Q8IZ16 206 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 NETO1Q8TDF5 533 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 PPP1R13LQ8WUF5 828 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 ASB11Q8WXH4 323 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 DHX38Q92620 1227 aaKnown RBP3.82□□□□□ -1.8
COPS3-213ENST00000577210 GATA6Q92908 595 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 CCDC120Q96HB5 630 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 MRFAP1L1Q96HT8 127 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 APBA2Q99767 749 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 CCDC113Q9H0I3 377 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 OSBPL2Q9H1P3 480 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 ANTXR1Q9H6X2 564 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 WHRNQ9P202 907 aa3.82□□□□□ -1.8
COPS3-213ENST00000577210 DNAJA2O60884 412 aa3.81□□□□□ -1.8
COPS3-213ENST00000577210 CEACAM5P06731 702 aa3.81□□□□□ -1.8
COPS3-213ENST00000577210 ACRP10323 421 aa3.81□□□□□ -1.8
COPS3-213ENST00000577210 ITGA4P13612 1032 aa3.81□□□□□ -1.8
COPS3-213ENST00000577210 ADMP35318 185 aa3.81□□□□□ -1.8
COPS3-213ENST00000577210 NOP2P46087 812 aaKnown RBP3.81□□□□□ -1.8
COPS3-213ENST00000577210 GP2P55259 537 aaKnown RBP3.81□□□□□ -1.8
COPS3-213ENST00000577210 AUHQ13825 339 aaKnown RBP3.81□□□□□ -1.8
COPS3-213ENST00000577210 NBPF9Q3BBW0 867 aa3.81□□□□□ -1.8
COPS3-213ENST00000577210 NOL9Q5SY16 702 aaKnown RBP3.81□□□□□ -1.8
COPS3-213ENST00000577210 LARP1BQ659C4 914 aaKnown RBP3.81□□□□□ -1.8
COPS3-213ENST00000577210 CWF19L1Q69YN2 538 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms