RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 ANKS1AQ92625 1134 aa18.47■□□□□ 0.55
LITAF-218ENST00000576036 R3HDMLQ9H3Y0 253 aa18.47■□□□□ 0.55
LITAF-218ENST00000576036 SENP2Q9HC62 589 aa18.47■□□□□ 0.55
LITAF-218ENST00000576036 RNF186Q9NXI6 227 aa18.47■□□□□ 0.55
LITAF-218ENST00000576036 ADGRA2Q96PE1 1338 aa18.47■□□□□ 0.55
LITAF-218ENST00000576036 FASTKD5Q7L8L6 764 aaKnown RBP18.46■□□□□ 0.55
LITAF-218ENST00000576036 ZSCAN10Q96SZ4 725 aaPredicted RBP18.46■□□□□ 0.55
LITAF-218ENST00000576036 TMEM47Q9BQJ4 181 aa18.46■□□□□ 0.55
LITAF-218ENST00000576036 GPHNQ9NQX3 736 aaPredicted RBP18.46■□□□□ 0.55
LITAF-218ENST00000576036 TNKSO95271 1327 aa18.46■□□□□ 0.55
LITAF-218ENST00000576036 PDHXO00330 501 aa18.45■□□□□ 0.54
LITAF-218ENST00000576036 NDUFB10O96000 172 aa18.45■□□□□ 0.54
LITAF-218ENST00000576036 USP14P54578 494 aa18.45■□□□□ 0.54
LITAF-218ENST00000576036 TRDNQ13061 729 aa18.45■□□□□ 0.54
LITAF-218ENST00000576036 POTEEQ6S8J3 1075 aa18.45■□□□□ 0.54
LITAF-218ENST00000576036 RALYLQ86SE5 291 aaKnown RBP18.45■□□□□ 0.54
LITAF-218ENST00000576036 SPICE1Q8N0Z3 855 aa18.45■□□□□ 0.54
LITAF-218ENST00000576036 IL17RAQ96F46 866 aa18.45■□□□□ 0.54
LITAF-218ENST00000576036 SYNPO2Q9UMS6 1093 aa18.45■□□□□ 0.54
LITAF-218ENST00000576036 STX8Q9UNK0 236 aa18.45■□□□□ 0.54
LITAF-218ENST00000576036 MGAMO43451 1857 aa18.44■□□□□ 0.54
LITAF-218ENST00000576036 F5H6K3 240 aa18.44■□□□□ 0.54
LITAF-218ENST00000576036 CPA1P15085 419 aa18.44■□□□□ 0.54
LITAF-218ENST00000576036 HOXA7P31268 230 aaPredicted RBP18.44■□□□□ 0.54
LITAF-218ENST00000576036 EXOSC10Q01780 885 aaKnown RBP18.44■□□□□ 0.54
LITAF-218ENST00000576036 KLRC3Q07444 240 aa18.44■□□□□ 0.54
LITAF-218ENST00000576036 DGKHQ86XP1 1220 aa18.44■□□□□ 0.54
LITAF-218ENST00000576036 GMCL1P1Q8NEA9 526 aa18.44■□□□□ 0.54
LITAF-218ENST00000576036 IGDCC4Q8TDY8 1250 aa18.44■□□□□ 0.54
LITAF-218ENST00000576036 NUP88Q99567 741 aaPredicted RBP18.44■□□□□ 0.54
LITAF-218ENST00000576036 ZCCHC17Q9NP64 241 aaKnown RBP18.44■□□□□ 0.54
LITAF-218ENST00000576036 TMOD4Q9NZQ9 345 aa18.44■□□□□ 0.54
LITAF-218ENST00000576036 SLC45A1Q9Y2W3 748 aa18.44■□□□□ 0.54
LITAF-218ENST00000576036 PCNTO95613 3336 aa18.43■□□□□ 0.54
LITAF-218ENST00000576036 PRC1O43663 620 aa18.43■□□□□ 0.54
LITAF-218ENST00000576036 TRPA1O75762 1119 aa18.43■□□□□ 0.54
LITAF-218ENST00000576036 TOP1P11387 765 aaKnown RBP18.43■□□□□ 0.54
LITAF-218ENST00000576036 ZKSCAN1P17029 563 aaPredicted RBP18.43■□□□□ 0.54
LITAF-218ENST00000576036 MAP2K1Q02750 393 aaPredicted RBP18.43■□□□□ 0.54
LITAF-218ENST00000576036 IQCA1Q86XH1 822 aa18.43■□□□□ 0.54
LITAF-218ENST00000576036 LPAR1Q92633 364 aa18.43■□□□□ 0.54
LITAF-218ENST00000576036 TCEANC2Q96MN5 208 aa18.43■□□□□ 0.54
LITAF-218ENST00000576036 TTC14Q96N46 770 aa18.43■□□□□ 0.54
LITAF-218ENST00000576036 NEK1Q96PY6 1258 aa18.43■□□□□ 0.54
LITAF-218ENST00000576036 CFHR5Q9BXR6 569 aa18.43■□□□□ 0.54
LITAF-218ENST00000576036 RPAP3Q9H6T3 665 aaPredicted RBP18.43■□□□□ 0.54
LITAF-218ENST00000576036 SH2D4AQ9H788 454 aa18.43■□□□□ 0.54
LITAF-218ENST00000576036 CASP8AP2Q9UKL3 1982 aa18.42■□□□□ 0.54
LITAF-218ENST00000576036 SMCHD1A6NHR9 2005 aa18.42■□□□□ 0.54
LITAF-218ENST00000576036 CYP2C8P10632 490 aa18.42■□□□□ 0.54
LITAF-218ENST00000576036 CRHR2Q13324 411 aa18.42■□□□□ 0.54
LITAF-218ENST00000576036 KRT32Q14532 448 aa18.42■□□□□ 0.54
LITAF-218ENST00000576036 JAKMIP1Q96N16 626 aaKnown RBP18.42■□□□□ 0.54
LITAF-218ENST00000576036 LRRC2Q9BYS8 371 aa18.42■□□□□ 0.54
LITAF-218ENST00000576036 ASCC2Q9H1I8 757 aaPredicted RBP18.42■□□□□ 0.54
LITAF-218ENST00000576036 LY9Q9HBG7 655 aa18.42■□□□□ 0.54
LITAF-218ENST00000576036 SAGE1Q9NXZ1 904 aa18.42■□□□□ 0.54
LITAF-218ENST00000576036 SH2B2O14492 632 aaPredicted RBP18.41■□□□□ 0.54
LITAF-218ENST00000576036 WDR46O15213 610 aaKnown RBP18.41■□□□□ 0.54
LITAF-218ENST00000576036 CA12O43570 354 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 TBC1D8O95759 1140 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 HSPA1AP0DMV8 641 aaKnown RBP18.41■□□□□ 0.54
LITAF-218ENST00000576036 HSPA1BP0DMV9 641 aaKnown RBP18.41■□□□□ 0.54
LITAF-218ENST00000576036 MCM5P33992 734 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 TAF1CQ15572 869 aaPredicted RBP18.41■□□□□ 0.54
LITAF-218ENST00000576036 PPP4R3BQ5MIZ7 849 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 FAM83BQ5T0W9 1011 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 SLFN13Q68D06 897 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 CATSPERGQ6ZRH7 1159 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 UBAC1Q9BSL1 405 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 BACH2Q9BYV9 841 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 GOPCQ9HD26 462 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 TSKSQ9UJT2 592 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 WDR19Q8NEZ3 1342 aa18.41■□□□□ 0.54
LITAF-218ENST00000576036 DOCK3Q8IZD9 2030 aa18.4■□□□□ 0.54
LITAF-218ENST00000576036 IFIT3O14879 490 aaKnown RBP18.4■□□□□ 0.54
LITAF-218ENST00000576036 FOXN1O15353 648 aa18.4■□□□□ 0.54
LITAF-218ENST00000576036 SNHG28P0DPA3 235 aa18.4■□□□□ 0.54
LITAF-218ENST00000576036 CCDC178Q5BJE1 867 aa18.4■□□□□ 0.54
LITAF-218ENST00000576036 DHX32Q7L7V1 743 aaKnown RBP18.4■□□□□ 0.54
LITAF-218ENST00000576036 CHMP4CQ96CF2 233 aa18.4■□□□□ 0.54
LITAF-218ENST00000576036 GMCL1Q96IK5 515 aa18.4■□□□□ 0.54
LITAF-218ENST00000576036 MTA3Q9BTC8 594 aa18.4■□□□□ 0.54
LITAF-218ENST00000576036 FBXO28Q9NVF7 368 aa18.4■□□□□ 0.54
LITAF-218ENST00000576036 MYH6P13533 1939 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 USP17L15C9J2P7 530 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 USP17L13C9JLJ4 530 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 USP17L11C9JVI0 530 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 USP17L18D6R9N7 530 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 USP17L22D6RA61 530 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 USP17L17D6RBQ6 530 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 USP17L19D6RCP7 530 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 USP17L20D6RJB6 530 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 PEX10O60683 326 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 ALDH1A1P00352 501 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 PDHBP11177 359 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 MCCP23508 829 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 USP17L24Q0WX57 530 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 TMEM67Q5HYA8 995 aa18.39■□□□□ 0.53
LITAF-218ENST00000576036 OTUD7BQ6GQQ9 843 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms