RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 TATDN1Q6P1N9 297 aa14.88□□□□□ -0.03
PRPF8-208ENST00000573716 LBX2Q6XYB7 198 aa14.88□□□□□ -0.03
PRPF8-208ENST00000573716 PPM1EQ8WY54 764 aa14.88□□□□□ -0.03
PRPF8-208ENST00000573716 SLC5A4Q9NY91 659 aa14.88□□□□□ -0.03
PRPF8-208ENST00000573716 U3KPZ7 1027 aaPredicted RBP14.88□□□□□ -0.03
PRPF8-208ENST00000573716 SPTBN5Q9NRC6 3674 aaKnown RBP14.88□□□□□ -0.03
PRPF8-208ENST00000573716 STRNO43815 780 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 PQBP1O60828 265 aaKnown RBP14.87□□□□□ -0.03
PRPF8-208ENST00000573716 COBLO75128 1261 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 RAG1P15918 1043 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 ERCC3P19447 782 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 EPHB4P54760 987 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 GRIN2CQ14957 1233 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 SNX17Q15036 470 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 TNNI3KQ59H18 835 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 TJAP1Q5JTD0 557 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 TTC6Q86TZ1 520 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 NCAPG2Q86XI2 1143 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 USP38Q8NB14 1042 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 SPATC1LQ9H0A9 340 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 TACC3Q9Y6A5 838 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 FPGT-TNNI3KV9GXZ4 949 aa14.87□□□□□ -0.03
PRPF8-208ENST00000573716 TNFRSF10AO00220 468 aa14.86□□□□□ -0.03
PRPF8-208ENST00000573716 CLTBP09497 229 aa14.86□□□□□ -0.03
PRPF8-208ENST00000573716 ITGB8P26012 769 aa14.86□□□□□ -0.03
PRPF8-208ENST00000573716 COG2Q14746 738 aa14.86□□□□□ -0.03
PRPF8-208ENST00000573716 SEPT2Q15019 361 aa14.86□□□□□ -0.03
PRPF8-208ENST00000573716 XPNPEP3Q9NQH7 507 aa14.86□□□□□ -0.03
PRPF8-208ENST00000573716 HOXC10Q9NYD6 342 aa14.86□□□□□ -0.03
PRPF8-208ENST00000573716 RAPGEFL1Q9UHV5 662 aa14.86□□□□□ -0.03
PRPF8-208ENST00000573716 SMCHD1A6NHR9 2005 aa14.86□□□□□ -0.03
PRPF8-208ENST00000573716 TMEM265A0A087WTH1 108 aa14.85□□□□□ -0.03
PRPF8-208ENST00000573716 POLR3DP05423 398 aaPredicted RBP14.85□□□□□ -0.03
PRPF8-208ENST00000573716 DNAJB2P25686 324 aa14.85□□□□□ -0.03
PRPF8-208ENST00000573716 FPGSQ05932 587 aa14.85□□□□□ -0.03
PRPF8-208ENST00000573716 MAGEB6Q8N7X4 407 aa14.85□□□□□ -0.03
PRPF8-208ENST00000573716 EHD4Q9H223 541 aa14.85□□□□□ -0.03
PRPF8-208ENST00000573716 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
PRPF8-208ENST00000573716 ZNFX1Q9P2E3 1918 aaKnown RBP14.85□□□□□ -0.03
PRPF8-208ENST00000573716 NAV1Q8NEY1 1877 aa14.84□□□□□ -0.03
PRPF8-208ENST00000573716 PGK1P00558 417 aa14.84□□□□□ -0.03
PRPF8-208ENST00000573716 IGHA2P01877 340 aa14.84□□□□□ -0.03
PRPF8-208ENST00000573716 CT47B1P0C2W7 299 aaPredicted RBP14.84□□□□□ -0.03
PRPF8-208ENST00000573716 RARBP10826 455 aa14.84□□□□□ -0.03
PRPF8-208ENST00000573716 SHMT1P34896 483 aa14.84□□□□□ -0.03
PRPF8-208ENST00000573716 SHCBP1Q8NEM2 672 aa14.84□□□□□ -0.03
PRPF8-208ENST00000573716 MAML3Q96JK9 1138 aa14.84□□□□□ -0.03
PRPF8-208ENST00000573716 TMEM39AQ9NV64 488 aa14.84□□□□□ -0.03
PRPF8-208ENST00000573716 PHF24Q9UPV7 400 aa14.84□□□□□ -0.03
PRPF8-208ENST00000573716 A0A0G2JMZ2 1700 aa14.83□□□□□ -0.03
PRPF8-208ENST00000573716 FLOT1O75955 427 aa14.83□□□□□ -0.04
PRPF8-208ENST00000573716 FCER1AP12319 257 aa14.83□□□□□ -0.04
PRPF8-208ENST00000573716 GUCY1A2P33402 732 aa14.83□□□□□ -0.04
PRPF8-208ENST00000573716 PLCD1P51178 756 aa14.83□□□□□ -0.04
PRPF8-208ENST00000573716 RARSP54136 660 aaKnown RBP14.83□□□□□ -0.04
PRPF8-208ENST00000573716 RNF180Q86T96 592 aa14.83□□□□□ -0.04
PRPF8-208ENST00000573716 FRAT1Q92837 279 aaPredicted RBP14.83□□□□□ -0.04
PRPF8-208ENST00000573716 CLUAP1Q96AJ1 413 aa14.83□□□□□ -0.04
PRPF8-208ENST00000573716 CCDC8Q9H0W5 538 aaPredicted RBP14.83□□□□□ -0.04
PRPF8-208ENST00000573716 MROH8Q9H579 483 aa14.83□□□□□ -0.04
PRPF8-208ENST00000573716 ZNF576Q9H609 170 aa14.83□□□□□ -0.04
PRPF8-208ENST00000573716 GPR108Q9NPR9 543 aa14.83□□□□□ -0.04
PRPF8-208ENST00000573716 TNNQ9UQP3 1299 aa14.83□□□□□ -0.04
PRPF8-208ENST00000573716 CDH23Q9H251 3354 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.82□□□□□ -0.04
PRPF8-208ENST00000573716 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.82□□□□□ -0.04
PRPF8-208ENST00000573716 A0A1W2PQ45 241 aaPredicted RBP14.82□□□□□ -0.04
PRPF8-208ENST00000573716 A0A1W2PQY0 241 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 A0A1W2PRG0 241 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 KIAA0355O15063 1070 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 SURF6O75683 361 aaKnown RBP14.82□□□□□ -0.04
PRPF8-208ENST00000573716 C1orf53Q5VUE5 145 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 CCDC129Q6ZRS4 1044 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 CERS3Q8IU89 383 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 SPICE1Q8N0Z3 855 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 MB21D1Q8N884 522 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 ARHGAP45Q92619 1136 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 LENG1Q96BZ8 264 aaPredicted RBP14.82□□□□□ -0.04
PRPF8-208ENST00000573716 TIFAQ96CG3 184 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 ATG4CQ96DT6 458 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 GAS2L1Q99501 681 aaPredicted RBP14.82□□□□□ -0.04
PRPF8-208ENST00000573716 TLR7Q9NYK1 1049 aaKnown RBP14.82□□□□□ -0.04
PRPF8-208ENST00000573716 PLXNA1Q9UIW2 1896 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 MYH8P13535 1937 aa14.82□□□□□ -0.04
PRPF8-208ENST00000573716 COL11A1P12107 1806 aaPredicted RBP14.81□□□□□ -0.04
PRPF8-208ENST00000573716 DCDC2CA8MYV0 355 aa14.81□□□□□ -0.04
PRPF8-208ENST00000573716 BCAR3O75815 825 aa14.81□□□□□ -0.04
PRPF8-208ENST00000573716 PGK2P07205 417 aa14.81□□□□□ -0.04
PRPF8-208ENST00000573716 DSG3P32926 999 aa14.81□□□□□ -0.04
PRPF8-208ENST00000573716 MAP3K12Q12852 859 aa14.81□□□□□ -0.04
PRPF8-208ENST00000573716 TRMT2AQ8IZ69 625 aaKnown RBP14.81□□□□□ -0.04
PRPF8-208ENST00000573716 MMP19Q99542 508 aa14.81□□□□□ -0.04
PRPF8-208ENST00000573716 DBNLQ9UJU6 430 aaKnown RBP14.81□□□□□ -0.04
PRPF8-208ENST00000573716 MYO9BQ13459 2157 aa14.81□□□□□ -0.04
PRPF8-208ENST00000573716 IPO8O15397 1037 aaKnown RBP14.8□□□□□ -0.04
PRPF8-208ENST00000573716 TAL1P17542 331 aaPredicted RBP14.8□□□□□ -0.04
PRPF8-208ENST00000573716 EVX2Q03828 476 aa14.8□□□□□ -0.04
PRPF8-208ENST00000573716 CCDC85BQ15834 202 aaPredicted RBP14.8□□□□□ -0.04
PRPF8-208ENST00000573716 KIAA1755Q5JYT7 1200 aa14.8□□□□□ -0.04
PRPF8-208ENST00000573716 CLEC10AQ8IUN9 316 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms