RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CRKP46108 304 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 TREML4Q6UXN2 200 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 MCF2L2Q86YR7 1114 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 TCP11L2Q8N4U5 519 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 GAL3ST3Q96A11 431 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 ARMC5Q96C12 935 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 CBX8Q9HC52 389 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 UBP1Q9NZI7 540 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 ATP10DQ9P241 1426 aa7.75□□□□□ -1.17
SF3B3-214ENST00000572365 PPLO60437 1756 aa7.74□□□□□ -1.17
SF3B3-214ENST00000572365 ATP2B1P20020 1258 aa7.74□□□□□ -1.17
SF3B3-214ENST00000572365 COL9A2Q14055 689 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-214ENST00000572365 ZNF385CQ66K41 422 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-214ENST00000572365 BNC2Q6ZN30 1099 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-214ENST00000572365 SLITRK4Q8IW52 837 aa7.74□□□□□ -1.17
SF3B3-214ENST00000572365 DMRTC2Q8IXT2 367 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-214ENST00000572365 DTWD1Q8N5C7 304 aa7.74□□□□□ -1.17
SF3B3-214ENST00000572365 DNAJC5GQ8N7S2 189 aa7.74□□□□□ -1.17
SF3B3-214ENST00000572365 GALNT11Q8NCW6 608 aa7.74□□□□□ -1.17
SF3B3-214ENST00000572365 NGDNQ8NEJ9 315 aaKnown RBP7.74□□□□□ -1.17
SF3B3-214ENST00000572365 KLHDC7BQ96G42 594 aa7.74□□□□□ -1.17
SF3B3-214ENST00000572365 PRAM1Q96QH2 718 aa7.74□□□□□ -1.17
SF3B3-214ENST00000572365 CARD10Q9BWT7 1032 aa7.74□□□□□ -1.17
SF3B3-214ENST00000572365 TRPM3Q9HCF6 1732 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-214ENST00000572365 ALS2Q96Q42 1657 aa7.73□□□□□ -1.17
SF3B3-214ENST00000572365 CILPO75339 1184 aa7.73□□□□□ -1.17
SF3B3-214ENST00000572365 SOX9P48436 509 aa7.73□□□□□ -1.17
SF3B3-214ENST00000572365 APOBRQ0VD83 1088 aa7.73□□□□□ -1.17
SF3B3-214ENST00000572365 SEPT6Q14141 434 aa7.73□□□□□ -1.17
SF3B3-214ENST00000572365 SUZ12Q15022 739 aaKnown RBP7.73□□□□□ -1.17
SF3B3-214ENST00000572365 POU4F3Q15319 338 aa7.73□□□□□ -1.17
SF3B3-214ENST00000572365 MARCH10Q8NA82 808 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-214ENST00000572365 ACSBG1Q96GR2 724 aa7.73□□□□□ -1.17
SF3B3-214ENST00000572365 CORO1BQ9BR76 489 aa7.73□□□□□ -1.17
SF3B3-214ENST00000572365 ENAMQ9NRM1 1142 aa7.73□□□□□ -1.17
SF3B3-214ENST00000572365 KRT82Q9NSB4 513 aa7.73□□□□□ -1.17
SF3B3-214ENST00000572365 NRXN1Q9ULB1 1477 aa7.73□□□□□ -1.17
SF3B3-214ENST00000572365 DEAF1O75398 565 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-214ENST00000572365 MAOBP27338 520 aa7.72□□□□□ -1.17
SF3B3-214ENST00000572365 PTPN11Q06124 597 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-214ENST00000572365 MPP2Q14168 576 aa7.72□□□□□ -1.17
SF3B3-214ENST00000572365 MAP1SQ66K74 1059 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-214ENST00000572365 MPRIPQ6WCQ1 1025 aa7.72□□□□□ -1.17
SF3B3-214ENST00000572365 DCAF11Q8TEB1 546 aa7.72□□□□□ -1.17
SF3B3-214ENST00000572365 JARID2Q92833 1246 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-214ENST00000572365 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.72□□□□□ -1.174e-15■■□□□ 12.1
SF3B3-214ENST00000572365 GINM1Q9NU53 330 aa7.72□□□□□ -1.17
SF3B3-214ENST00000572365 POGKQ9P215 609 aa7.72□□□□□ -1.17
SF3B3-214ENST00000572365 EFR3BQ9Y2G0 817 aa7.72□□□□□ -1.17
SF3B3-214ENST00000572365 PRR36Q9H6K5 1346 aa7.72□□□□□ -1.17
SF3B3-214ENST00000572365 GPRASP1Q5JY77 1395 aa7.71□□□□□ -1.17
SF3B3-214ENST00000572365 SSH2Q76I76 1423 aa7.71□□□□□ -1.17
SF3B3-214ENST00000572365 RRBP1Q9P2E9 1410 aaKnown RBP7.71□□□□□ -1.17
SF3B3-214ENST00000572365 ECEL1O95672 775 aa7.71□□□□□ -1.18
SF3B3-214ENST00000572365 PRELPP51888 382 aa7.71□□□□□ -1.18
SF3B3-214ENST00000572365 DDB1Q16531 1140 aa7.71□□□□□ -1.18
SF3B3-214ENST00000572365 ZNF827Q17R98 1081 aa7.71□□□□□ -1.18
SF3B3-214ENST00000572365 DIEXFQ68CQ4 756 aaKnown RBP7.71□□□□□ -1.18
SF3B3-214ENST00000572365 FBXO27Q8NI29 283 aa7.71□□□□□ -1.18
SF3B3-214ENST00000572365 KCNB2Q92953 911 aa7.71□□□□□ -1.18
SF3B3-214ENST00000572365 NKD1Q969G9 470 aa7.71□□□□□ -1.18
SF3B3-214ENST00000572365 CCDC86Q9H6F5 360 aaKnown RBP7.71□□□□□ -1.18
SF3B3-214ENST00000572365 CRYBG1Q9Y4K1 1723 aa7.71□□□□□ -1.18
SF3B3-214ENST00000572365 LOC100289279A0A1B0GTE1 492 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 ADAM11O75078 769 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 ARHGEF15O94989 841 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 CTSBP07858 339 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 CD68P34810 354 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-214ENST00000572365 NASPP49321 788 aaPredicted RBP7.7□□□□□ -1.18
SF3B3-214ENST00000572365 CWF19L2Q2TBE0 894 aaKnown RBP7.7□□□□□ -1.18
SF3B3-214ENST00000572365 LINC00114Q6XXX2 140 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 REC114Q7Z4M0 266 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 SVOPQ8N4V2 548 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 NEDD1Q8NHV4 660 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 GPBAR1Q8TDU6 330 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 TRIM11Q96F44 468 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 RRAGCQ9HB90 399 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 STRIP2Q9ULQ0 834 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 ABCC11Q96J66 1382 aa7.7□□□□□ -1.18
SF3B3-214ENST00000572365 YTHDC2Q9H6S0 1430 aaKnown RBP7.69□□□□□ -1.18
SF3B3-214ENST00000572365 PEAK1Q9H792 1746 aa7.69□□□□□ -1.18
SF3B3-214ENST00000572365 A0A0A0MRY4 1105 aa7.69□□□□□ -1.18
SF3B3-214ENST00000572365 DLL1O00548 723 aa7.69□□□□□ -1.18
SF3B3-214ENST00000572365 TLR3O15455 904 aaKnown RBP7.69□□□□□ -1.18
SF3B3-214ENST00000572365 GTF2F1P35269 517 aaKnown RBP eCLIP7.69□□□□□ -1.18
SF3B3-214ENST00000572365 NLRP12P59046 1061 aa7.69□□□□□ -1.18
SF3B3-214ENST00000572365 RPL6Q02878 288 aaKnown RBP7.69□□□□□ -1.18
SF3B3-214ENST00000572365 RBL2Q08999 1139 aa7.69□□□□□ -1.18
SF3B3-214ENST00000572365 FOXD4L6Q3SYB3 417 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-214ENST00000572365 SEZ6Q53EL9 994 aa7.69□□□□□ -1.18
SF3B3-214ENST00000572365 TRAPPC3LQ5T215 181 aa7.69□□□□□ -1.18
SF3B3-214ENST00000572365 FOXD4L3Q6VB84 417 aaPredicted RBP7.69□□□□□ -1.18
SF3B3-214ENST00000572365 FBXO11Q86XK2 927 aa7.69□□□□□ -1.18
SF3B3-214ENST00000572365 DHX38Q92620 1227 aaKnown RBP7.69□□□□□ -1.18
SF3B3-214ENST00000572365 ZC3H12CQ9C0D7 883 aaKnown RBP7.69□□□□□ -1.18
SF3B3-214ENST00000572365 KCNK4Q9NYG8 393 aa7.69□□□□□ -1.18
SF3B3-214ENST00000572365 RPGRIP1LQ68CZ1 1315 aa7.69□□□□□ -1.18
SF3B3-214ENST00000572365 DDX3YO15523 660 aaKnown RBP7.68□□□□□ -1.18
SF3B3-214ENST00000572365 ZNF862O60290 1169 aa7.68□□□□□ -1.18
SF3B3-214ENST00000572365 BPNT1O95861 308 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 361.6 ms