RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 LRRC47Q8N1G4 583 aaKnown RBP14.08□□□□□ -0.16
TRIM25-205ENST00000572021 SMCR8Q8TEV9 937 aaPredicted RBP14.08□□□□□ -0.16
TRIM25-205ENST00000572021 ZKSCAN3Q9BRR0 538 aa14.08□□□□□ -0.16
TRIM25-205ENST00000572021 RPAP3Q9H6T3 665 aaPredicted RBP14.08□□□□□ -0.16
TRIM25-205ENST00000572021 PRDM10Q9NQV6 1147 aa14.08□□□□□ -0.16
TRIM25-205ENST00000572021 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
TRIM25-205ENST00000572021 ADGRA2Q96PE1 1338 aa14.08□□□□□ -0.16
TRIM25-205ENST00000572021 FKTNO75072 461 aa14.07□□□□□ -0.16
TRIM25-205ENST00000572021 IRX3P78415 501 aaPredicted RBP14.07□□□□□ -0.16
TRIM25-205ENST00000572021 CD99L2Q8TCZ2 262 aa14.07□□□□□ -0.16
TRIM25-205ENST00000572021 C12orf42Q96LP6 360 aa14.07□□□□□ -0.16
TRIM25-205ENST00000572021 NUP88Q99567 741 aaPredicted RBP14.07□□□□□ -0.16
TRIM25-205ENST00000572021 P2RX7Q99572 595 aaKnown RBP14.07□□□□□ -0.16
TRIM25-205ENST00000572021 RNF41Q9H4P4 317 aaPredicted RBP14.07□□□□□ -0.16
TRIM25-205ENST00000572021 VCPKMTQ9H867 229 aa14.07□□□□□ -0.16
TRIM25-205ENST00000572021 NYAP2Q9P242 653 aa14.07□□□□□ -0.16
TRIM25-205ENST00000572021 MTMR7Q9Y216 660 aa14.07□□□□□ -0.16
TRIM25-205ENST00000572021 SLC45A1Q9Y2W3 748 aa14.07□□□□□ -0.16
TRIM25-205ENST00000572021 KDM4AO75164 1064 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 TTLL1O95922 423 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 OSBPP22059 807 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 SP3Q02447 781 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 PABPC4Q13310 644 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRIM25-205ENST00000572021 C17orf99Q6UX52 265 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 RASGRP2Q7LDG7 609 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 ANKRD13CQ8N6S4 541 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 TANGO6Q9C0B7 1094 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 ARHGAP39Q9C0H5 1083 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 SH2D4AQ9H788 454 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 PNMA3Q9UL41 463 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 STX8Q9UNK0 236 aa14.06□□□□□ -0.16
TRIM25-205ENST00000572021 USP17L15C9J2P7 530 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 USP17L13C9JLJ4 530 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 USP17L11C9JVI0 530 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 USP17L18D6R9N7 530 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 USP17L22D6RA61 530 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 USP17L17D6RBQ6 530 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 USP17L19D6RCP7 530 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 USP17L20D6RJB6 530 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 HOXA7P31268 230 aaPredicted RBP14.05□□□□□ -0.16
TRIM25-205ENST00000572021 USP17L24Q0WX57 530 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 POTEEQ6S8J3 1075 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 CATSPERGQ6ZRH7 1159 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 STOX1Q6ZVD7 989 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 GOPCQ9HD26 462 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 F5H6K3 240 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 NDUFB10O96000 172 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 HERVK_113P62684 666 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 KLRC3Q07444 240 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 FAM83BQ5T0W9 1011 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 ESR2Q92731 530 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 ZSWIM5Q9P217 1185 aa14.05□□□□□ -0.16
TRIM25-205ENST00000572021 E7EWF7 191 aa14.04□□□□□ -0.16
TRIM25-205ENST00000572021 SLC27A2O14975 620 aa14.04□□□□□ -0.16
TRIM25-205ENST00000572021 BCRP11274 1271 aa14.04□□□□□ -0.16
TRIM25-205ENST00000572021 PCP11498 1178 aaKnown RBP14.04□□□□□ -0.16
TRIM25-205ENST00000572021 CTGFP29279 349 aa14.04□□□□□ -0.16
TRIM25-205ENST00000572021 RLFQ13129 1914 aa14.04□□□□□ -0.16
TRIM25-205ENST00000572021 COL9A3Q14050 684 aaPredicted RBP14.04□□□□□ -0.16
TRIM25-205ENST00000572021 NOM1Q5C9Z4 860 aaKnown RBP14.04□□□□□ -0.16
TRIM25-205ENST00000572021 CREB3L3Q68CJ9 461 aa14.04□□□□□ -0.16
TRIM25-205ENST00000572021 CYB5R4Q7L1T6 521 aa14.04□□□□□ -0.16
TRIM25-205ENST00000572021 LPAR1Q92633 364 aa14.04□□□□□ -0.16
TRIM25-205ENST00000572021 PAGR1Q9BTK6 254 aa14.04□□□□□ -0.16
TRIM25-205ENST00000572021 TXNRD2Q9NNW7 524 aa14.04□□□□□ -0.16
TRIM25-205ENST00000572021 FBXO28Q9NVF7 368 aa14.04□□□□□ -0.16
TRIM25-205ENST00000572021 ISY1Q9ULR0 285 aaKnown RBP14.04□□□□□ -0.16
TRIM25-205ENST00000572021 PARP14Q460N5 1801 aa14.03□□□□□ -0.16
TRIM25-205ENST00000572021 NECTIN1Q15223 517 aa14.03□□□□□ -0.16
TRIM25-205ENST00000572021 RCSD1Q6JBY9 416 aa14.03□□□□□ -0.16
TRIM25-205ENST00000572021 CHST3Q7LGC8 479 aa14.03□□□□□ -0.16
TRIM25-205ENST00000572021 MKL1Q969V6 931 aa14.03□□□□□ -0.16
TRIM25-205ENST00000572021 TMEM47Q9BQJ4 181 aa14.03□□□□□ -0.16
TRIM25-205ENST00000572021 SPDYE16A6NNV3 312 aaPredicted RBP14.02□□□□□ -0.16
TRIM25-205ENST00000572021 WDR46O15213 610 aaKnown RBP14.02□□□□□ -0.16
TRIM25-205ENST00000572021 FLOT1O75955 427 aa14.02□□□□□ -0.16
TRIM25-205ENST00000572021 MCCP23508 829 aa14.02□□□□□ -0.16
TRIM25-205ENST00000572021 LACTBP83111 547 aaPredicted RBP14.02□□□□□ -0.16
TRIM25-205ENST00000572021 SLFN13Q68D06 897 aa14.02□□□□□ -0.16
TRIM25-205ENST00000572021 ERO1AQ96HE7 468 aa14.02□□□□□ -0.16
TRIM25-205ENST00000572021 ANP32EQ9BTT0 268 aa14.02□□□□□ -0.16
TRIM25-205ENST00000572021 KRT23Q9C075 422 aa14.02□□□□□ -0.16
TRIM25-205ENST00000572021 CNNM2Q9H8M5 875 aa14.02□□□□□ -0.16
TRIM25-205ENST00000572021 RBPJLQ9UBG7 517 aa14.02□□□□□ -0.16
TRIM25-205ENST00000572021 MGAMO43451 1857 aa14.02□□□□□ -0.16
TRIM25-205ENST00000572021 PSMC4P43686 418 aa14.01□□□□□ -0.17
TRIM25-205ENST00000572021 TRDNQ13061 729 aa14.01□□□□□ -0.17
TRIM25-205ENST00000572021 ATG4CQ96DT6 458 aa14.01□□□□□ -0.17
TRIM25-205ENST00000572021 TRIM47Q96LD4 638 aa14.01□□□□□ -0.17
TRIM25-205ENST00000572021 ZSCAN10Q96SZ4 725 aaPredicted RBP14.01□□□□□ -0.17
TRIM25-205ENST00000572021 TCP11L1Q9NUJ3 509 aa14.01□□□□□ -0.17
TRIM25-205ENST00000572021 TRIM17Q9Y577 477 aa14.01□□□□□ -0.17
TRIM25-205ENST00000572021 COL11A1P12107 1806 aaPredicted RBP14.01□□□□□ -0.17
TRIM25-205ENST00000572021 HTTP42858 3142 aa14.01□□□□□ -0.17
TRIM25-205ENST00000572021 TNKSO95271 1327 aa14.01□□□□□ -0.17
TRIM25-205ENST00000572021 CNMDO75829 334 aa14□□□□□ -0.17
TRIM25-205ENST00000572021 GCLCP48506 637 aaPredicted RBP14□□□□□ -0.17
TRIM25-205ENST00000572021 NOVP48745 357 aa14□□□□□ -0.17
TRIM25-205ENST00000572021 COG2Q14746 738 aa14□□□□□ -0.17
TRIM25-205ENST00000572021 Q3C1V9 767 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms