RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 TTC21AQ8NDW8 1320 aa9.13□□□□□ -0.95
CNOT1-222ENST00000570139 EIF4EBP3O60516 100 aaPredicted RBP9.13□□□□□ -0.95
CNOT1-222ENST00000570139 PARNO95453 639 aaKnown RBP9.13□□□□□ -0.95
CNOT1-222ENST00000570139 MASP1P48740 699 aa9.13□□□□□ -0.95
CNOT1-222ENST00000570139 MORC1Q86VD1 984 aa9.13□□□□□ -0.95
CNOT1-222ENST00000570139 TRIM22Q8IYM9 498 aa9.13□□□□□ -0.95
CNOT1-222ENST00000570139 ZSWIM2Q8NEG5 633 aa9.13□□□□□ -0.95
CNOT1-222ENST00000570139 RGPD8O14715 1765 aaPredicted RBP9.13□□□□□ -0.95
CNOT1-222ENST00000570139 PRR36Q9H6K5 1346 aa9.12□□□□□ -0.95
CNOT1-222ENST00000570139 VIL1P09327 827 aaKnown RBP9.12□□□□□ -0.95
CNOT1-222ENST00000570139 GUCY2CP25092 1073 aa9.12□□□□□ -0.95
CNOT1-222ENST00000570139 PPP2R1AP30153 589 aa9.12□□□□□ -0.95
CNOT1-222ENST00000570139 AP3B2Q13367 1082 aa9.12□□□□□ -0.95
CNOT1-222ENST00000570139 HFE2Q6ZVN8 426 aa9.12□□□□□ -0.95
CNOT1-222ENST00000570139 EEPD1Q7L9B9 569 aa9.12□□□□□ -0.95
CNOT1-222ENST00000570139 FAM178BQ8IXR5 827 aa9.12□□□□□ -0.95
CNOT1-222ENST00000570139 UBE2OQ9C0C9 1292 aaKnown RBP9.12□□□□□ -0.95
CNOT1-222ENST00000570139 PFDN2Q9UHV9 154 aa9.12□□□□□ -0.95
CNOT1-222ENST00000570139 SOX13Q9UN79 622 aa9.12□□□□□ -0.95
CNOT1-222ENST00000570139 PTCH2Q9Y6C5 1203 aa9.12□□□□□ -0.95
CNOT1-222ENST00000570139 A0A1W2PQH9 124 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 MEIS3P2A8K0S8 358 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 ZBTB42B2RXF5 422 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 SMCPP49901 116 aaPredicted RBP9.11□□□□□ -0.95
CNOT1-222ENST00000570139 HNRNPUQ00839 825 aaKnown RBP eCLIP9.11□□□□□ -0.95
CNOT1-222ENST00000570139 ZNF252P-AS1Q0IIN9 211 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 ZNF423Q2M1K9 1284 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 KANK3Q6NY19 840 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 C6orf15Q6UXA7 325 aaPredicted RBP9.11□□□□□ -0.95
CNOT1-222ENST00000570139 TTC6Q86TZ1 520 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 PNISRQ8TF01 805 aaKnown RBP9.11□□□□□ -0.95
CNOT1-222ENST00000570139 FBXO41Q8TF61 875 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 CFAP53Q96M91 514 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 YTHDC1Q96MU7 727 aaKnown RBP9.11□□□□□ -0.95
CNOT1-222ENST00000570139 IGFLR1Q9H665 355 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 C19orf44Q9H6X5 657 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 DNAJB12Q9NXW2 375 aaKnown RBP9.11□□□□□ -0.95
CNOT1-222ENST00000570139 ZMYM5Q9UJ78 669 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 PRR12Q9ULL5 1215 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 SMG6Q86US8 1419 aaKnown RBP9.11□□□□□ -0.95
CNOT1-222ENST00000570139 MSH6P52701 1360 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 AATKQ6ZMQ8 1374 aa9.11□□□□□ -0.95
CNOT1-222ENST00000570139 XIRP1Q702N8 1843 aaKnown RBP9.1□□□□□ -0.95
CNOT1-222ENST00000570139 ACEP12821 1306 aa9.1□□□□□ -0.95
CNOT1-222ENST00000570139 SLC35F4A4IF30 521 aa9.1□□□□□ -0.95
CNOT1-222ENST00000570139 FAM187AA6NFU0 413 aa9.1□□□□□ -0.95
CNOT1-222ENST00000570139 FGFR3P22607 806 aa9.1□□□□□ -0.95
CNOT1-222ENST00000570139 HSPA2P54652 639 aa9.1□□□□□ -0.95
CNOT1-222ENST00000570139 NCAPHQ15003 741 aa9.1□□□□□ -0.95
CNOT1-222ENST00000570139 TKFCQ3LXA3 575 aa9.1□□□□□ -0.95
CNOT1-222ENST00000570139 ZC3H12BQ5HYM0 836 aaKnown RBP9.1□□□□□ -0.95
CNOT1-222ENST00000570139 VN1R5Q7Z5H4 357 aa9.1□□□□□ -0.95
CNOT1-222ENST00000570139 TAB3Q8N5C8 712 aaPredicted RBP9.1□□□□□ -0.95
CNOT1-222ENST00000570139 GRIN3AQ8TCU5 1115 aa9.1□□□□□ -0.95
CNOT1-222ENST00000570139 TMEM40Q8WWA1 233 aa9.1□□□□□ -0.95
CNOT1-222ENST00000570139 POLR3KQ9Y2Y1 108 aaPredicted RBP9.1□□□□□ -0.95
CNOT1-222ENST00000570139 BLMP54132 1417 aaPredicted RBP9.1□□□□□ -0.95
CNOT1-222ENST00000570139 SSH2Q76I76 1423 aa9.1□□□□□ -0.95
CNOT1-222ENST00000570139 OVOS2A0A0J9YW53 1432 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 OVOS2Q6IE36 1432 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 FYB1O15117 783 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 GRIN3BO60391 1043 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 DIAPH1O60610 1272 aaKnown RBP9.09□□□□□ -0.95
CNOT1-222ENST00000570139 ASMTLO95671 621 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 PDGFRBP09619 1106 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 HCLS1P14317 486 aaPredicted RBP9.09□□□□□ -0.95
CNOT1-222ENST00000570139 CABP4P57796 275 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 PTSQ03393 145 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 DBN1Q16643 649 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 LONRF2Q1L5Z9 754 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 TMEM67Q5HYA8 995 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 SPATC1Q76KD6 591 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 KRT26Q7Z3Y9 468 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 PRPF38AQ8NAV1 312 aaKnown RBP9.09□□□□□ -0.95
CNOT1-222ENST00000570139 ZSCAN1Q8NBB4 408 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 STK35Q8TDR2 534 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 CEP89Q96ST8 783 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 ADAM19Q9H013 955 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 CHPF2Q9P2E5 772 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 HCN2Q9UL51 889 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 PDZRN3Q9UPQ7 1066 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 PIK3C2AO00443 1686 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 SHPRHQ149N8 1683 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 TMEM94Q12767 1356 aa9.09□□□□□ -0.95
CNOT1-222ENST00000570139 C1orf167Q5SNV9 1468 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 CDK12Q9NYV4 1490 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-222ENST00000570139 ZBED9Q6R2W3 1325 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 B2RBV5 119 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 GSTP1P09211 210 aaKnown RBP9.08□□□□□ -0.96
CNOT1-222ENST00000570139 ESRRAP11474 423 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-222ENST00000570139 ATF3P18847 181 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 TBC1D8BQ0IIM8 1120 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 CNGB1Q14028 1251 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-222ENST00000570139 IKBKEQ14164 716 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 WDR43Q15061 677 aaKnown RBP eCLIP9.08□□□□□ -0.96
CNOT1-222ENST00000570139 MAP1SQ66K74 1059 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-222ENST00000570139 TREML4Q6UXN2 200 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 RUFY4Q6ZNE9 571 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 FAM35AQ86V20 835 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 FAM9BQ8IZU0 186 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms