RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 C12orf42Q96LP6 360 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDT1-203ENST00000569140 NBPF3Q9H094 633 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 STX8Q9UNK0 236 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 MTMR7Q9Y216 660 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 TMX2Q9Y320 296 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 TACC3Q9Y6A5 838 aa15.15■□□□□ 0.02
CDT1-203ENST00000569140 GREB1LQ9C091 1923 aaPredicted RBP15.15■□□□□ 0.02
CDT1-203ENST00000569140 PLIN4Q96Q06 1357 aa15.14■□□□□ 0.01
CDT1-203ENST00000569140 NMT2O60551 498 aa15.14■□□□□ 0.01
CDT1-203ENST00000569140 TTLL1O95922 423 aa15.14■□□□□ 0.01
CDT1-203ENST00000569140 NOM1Q5C9Z4 860 aaKnown RBP15.14■□□□□ 0.01
CDT1-203ENST00000569140 CTU1Q7Z7A3 348 aaKnown RBP15.14■□□□□ 0.01
CDT1-203ENST00000569140 SIAH1Q8IUQ4 282 aa15.14■□□□□ 0.01
CDT1-203ENST00000569140 ESR2Q92731 530 aa15.14■□□□□ 0.01
CDT1-203ENST00000569140 PAGR1Q9BTK6 254 aa15.14■□□□□ 0.01
CDT1-203ENST00000569140 VCPKMTQ9H867 229 aa15.14■□□□□ 0.01
CDT1-203ENST00000569140 NYAP2Q9P242 653 aa15.14■□□□□ 0.01
CDT1-203ENST00000569140 TRIM17Q9Y577 477 aa15.14■□□□□ 0.01
CDT1-203ENST00000569140 MYH4Q9Y623 1939 aa15.13■□□□□ 0.01
CDT1-203ENST00000569140 IGKV6D-41A0A0C4DH26 115 aa15.13■□□□□ 0.01
CDT1-203ENST00000569140 B4E1Z4 1266 aa15.13■□□□□ 0.01
CDT1-203ENST00000569140 PCP11498 1178 aaKnown RBP15.13■□□□□ 0.01
CDT1-203ENST00000569140 HOXA7P31268 230 aaPredicted RBP15.13■□□□□ 0.01
CDT1-203ENST00000569140 HERVK_113P62684 666 aa15.13■□□□□ 0.01
CDT1-203ENST00000569140 ARHGEF6Q15052 776 aa15.13■□□□□ 0.01
CDT1-203ENST00000569140 KIAA1755Q5JYT7 1200 aa15.13■□□□□ 0.01
CDT1-203ENST00000569140 PPP4R3BQ5MIZ7 849 aa15.13■□□□□ 0.01
CDT1-203ENST00000569140 C17orf99Q6UX52 265 aa15.13■□□□□ 0.01
CDT1-203ENST00000569140 LPAR1Q92633 364 aa15.13■□□□□ 0.01
CDT1-203ENST00000569140 P2RX7Q99572 595 aaKnown RBP15.13■□□□□ 0.01
CDT1-203ENST00000569140 MTMR4Q9NYA4 1195 aa15.13■□□□□ 0.01
CDT1-203ENST00000569140 RBM8AQ9Y5S9 174 aaKnown RBP15.13■□□□□ 0.01
CDT1-203ENST00000569140 ADGRA2Q96PE1 1338 aa15.13■□□□□ 0.01
CDT1-203ENST00000569140 WDR46O15213 610 aaKnown RBP15.12■□□□□ 0.01
CDT1-203ENST00000569140 KDM4AO75164 1064 aa15.12■□□□□ 0.01
CDT1-203ENST00000569140 FLOT1O75955 427 aa15.12■□□□□ 0.01
CDT1-203ENST00000569140 FMNL1O95466 1100 aaPredicted RBP15.12■□□□□ 0.01
CDT1-203ENST00000569140 GCLCP48506 637 aaPredicted RBP15.12■□□□□ 0.01
CDT1-203ENST00000569140 LACTBP83111 547 aaPredicted RBP15.12■□□□□ 0.01
CDT1-203ENST00000569140 TRDNQ13061 729 aa15.12■□□□□ 0.01
CDT1-203ENST00000569140 FAM83BQ5T0W9 1011 aa15.12■□□□□ 0.01
CDT1-203ENST00000569140 CATSPERGQ6ZRH7 1159 aa15.12■□□□□ 0.01
CDT1-203ENST00000569140 NUP88Q99567 741 aaPredicted RBP15.12■□□□□ 0.01
CDT1-203ENST00000569140 ZKSCAN3Q9BRR0 538 aa15.12■□□□□ 0.01
CDT1-203ENST00000569140 ARHGAP39Q9C0H5 1083 aa15.12■□□□□ 0.01
CDT1-203ENST00000569140 EFCC1Q9HA90 598 aa15.12■□□□□ 0.01
CDT1-203ENST00000569140 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
CDT1-203ENST00000569140 ZSWIM8A7E2V4 1837 aa15.11■□□□□ 0.01
CDT1-203ENST00000569140 FGRP09769 529 aa15.11■□□□□ 0.01
CDT1-203ENST00000569140 BCRP11274 1271 aa15.11■□□□□ 0.01
CDT1-203ENST00000569140 PSMC4P43686 418 aa15.11■□□□□ 0.01
CDT1-203ENST00000569140 RALYLQ86SE5 291 aaKnown RBP15.11■□□□□ 0.01
CDT1-203ENST00000569140 CCAR1Q8IX12 1150 aaKnown RBP15.11■□□□□ 0.01
CDT1-203ENST00000569140 KRT23Q9C075 422 aa15.11■□□□□ 0.01
CDT1-203ENST00000569140 MCOLN1Q9GZU1 580 aa15.11■□□□□ 0.01
CDT1-203ENST00000569140 LSG1Q9H089 658 aaKnown RBP15.11■□□□□ 0.01
CDT1-203ENST00000569140 CNNM2Q9H8M5 875 aa15.11■□□□□ 0.01
CDT1-203ENST00000569140 F5H6K3 240 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 PEX10O60683 326 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 NDUFB10O96000 172 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 CYP21A2P08686 494 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 FCGRTP55899 365 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 KLRC3Q07444 240 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 IKQ13123 557 aaPredicted RBP15.1■□□□□ 0.01
CDT1-203ENST00000569140 FAM110CQ1W6H9 321 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 SLFN13Q68D06 897 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 OTOP1Q7RTM1 612 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 IQCA1Q86XH1 822 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 GTF3C2Q8WUA4 911 aaPredicted RBP15.1■□□□□ 0.01
CDT1-203ENST00000569140 MAP4K1Q92918 833 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 UBAC1Q9BSL1 405 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 IL17RBQ9NRM6 502 aa15.1■□□□□ 0.01
CDT1-203ENST00000569140 TNPO2O14787 897 aaKnown RBP15.09■□□□□ 0.01
CDT1-203ENST00000569140 PLS1Q14651 629 aa15.09■□□□□ 0.01
CDT1-203ENST00000569140 COG2Q14746 738 aa15.09■□□□□ 0.01
CDT1-203ENST00000569140 CCDC96Q2M329 555 aa15.09■□□□□ 0.01
CDT1-203ENST00000569140 WDR78Q5VTH9 848 aa15.09■□□□□ 0.01
CDT1-203ENST00000569140 GPRC5AQ8NFJ5 357 aa15.09■□□□□ 0.01
CDT1-203ENST00000569140 CTDP1Q9Y5B0 961 aaPredicted RBP15.09■□□□□ 0.01
CDT1-203ENST00000569140 SPDYE16A6NNV3 312 aaPredicted RBP15.08■□□□□ 0
CDT1-203ENST00000569140 SLC1A4P43007 532 aa15.08■□□□□ 0
CDT1-203ENST00000569140 GMCL1P1Q8NEA9 526 aa15.08■□□□□ 0
CDT1-203ENST00000569140 NCOA7Q8NI08 942 aa15.08■□□□□ 0
CDT1-203ENST00000569140 NKX2-3Q8TAU0 364 aa15.08■□□□□ 0
CDT1-203ENST00000569140 MKL1Q969V6 931 aa15.08■□□□□ 0
CDT1-203ENST00000569140 TXNRD2Q9NNW7 524 aa15.08■□□□□ 0
CDT1-203ENST00000569140 HOXC10Q9NYD6 342 aa15.08■□□□□ 0
CDT1-203ENST00000569140 E7EWF7 191 aa15.07■□□□□ 0
CDT1-203ENST00000569140 TOP1P11387 765 aaKnown RBP15.07■□□□□ 0
CDT1-203ENST00000569140 MCCP23508 829 aa15.07■□□□□ 0
CDT1-203ENST00000569140 HOXD10P28358 340 aa15.07■□□□□ 0
CDT1-203ENST00000569140 ERVK-9P63128 1117 aa15.07■□□□□ 0
CDT1-203ENST00000569140 ERVK-24P63145 666 aa15.07■□□□□ 0
CDT1-203ENST00000569140 CAP1Q01518 475 aa15.07■□□□□ 0
CDT1-203ENST00000569140 PKN2Q16513 984 aaKnown RBP15.07■□□□□ 0
CDT1-203ENST00000569140 RNF20Q5VTR2 975 aa15.07■□□□□ 0
CDT1-203ENST00000569140 CREB3L3Q68CJ9 461 aa15.07■□□□□ 0
CDT1-203ENST00000569140 KIFC2Q96AC6 838 aa15.07■□□□□ 0
CDT1-203ENST00000569140 ATG4CQ96DT6 458 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms