RNA–Protein interactions for RNA: ENST00000566749.5

PPP4C-209, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-209	ENST00000566749	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	29.24	■■■□□ 2.27
PPP4C-209	ENST00000566749	RAD21	O60216	631 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	HAND2	P61296	217 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	KIAA1755	Q5JYT7	1200 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	SKAP1	Q86WV1	359 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	NEDD1	Q8NHV4	660 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	RUFY2	Q8WXA3	655 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	TANGO6	Q9C0B7	1094 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	GOPC	Q9HD26	462 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	NYAP2	Q9P242	653 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	IGKV6D-41	A0A0C4DH26	115 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	CHML	P26374	656 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	CEP95	Q96GE4	821 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	TOMM22	Q9NS69	142 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	MORF4L1	Q9UBU8	362 aa		29.23	■■■□□ 2.27
PPP4C-209	ENST00000566749	TSPY2	A6NKD2	308 aa		29.22	■■■□□ 2.27
PPP4C-209	ENST00000566749	PRMT2	P55345	433 aa		29.22	■■■□□ 2.27
PPP4C-209	ENST00000566749	PAGR1	Q9BTK6	254 aa		29.22	■■■□□ 2.27
PPP4C-209	ENST00000566749	DSCC1	Q9BVC3	393 aa		29.22	■■■□□ 2.27
PPP4C-209	ENST00000566749	MTMR4	Q9NYA4	1195 aa		29.22	■■■□□ 2.27
PPP4C-209	ENST00000566749	CLIP2	Q9UDT6	1046 aa		29.22	■■■□□ 2.27
PPP4C-209	ENST00000566749	SRRD	Q9UH36	339 aa		29.22	■■■□□ 2.27
PPP4C-209	ENST00000566749	PTCH2	Q9Y6C5	1203 aa		29.22	■■■□□ 2.27
PPP4C-209	ENST00000566749	RAD50	Q92878	1312 aa		29.21	■■■□□ 2.27
PPP4C-209	ENST00000566749	TNPO2	O14787	897 aa	Known RBP	29.21	■■■□□ 2.27
PPP4C-209	ENST00000566749	RANBP6	O60518	1105 aa	Known RBP	29.21	■■■□□ 2.27
PPP4C-209	ENST00000566749	GPRC5A	Q8NFJ5	357 aa		29.21	■■■□□ 2.27
PPP4C-209	ENST00000566749	IL25	Q9H293	177 aa		29.21	■■■□□ 2.27
PPP4C-209	ENST00000566749	TXNRD2	Q9NNW7	524 aa		29.21	■■■□□ 2.27
PPP4C-209	ENST00000566749	RBPJL	Q9UBG7	517 aa		29.21	■■■□□ 2.27
PPP4C-209	ENST00000566749	TACC3	Q9Y6A5	838 aa		29.21	■■■□□ 2.27
PPP4C-209	ENST00000566749	PLIN4	Q96Q06	1357 aa		29.21	■■■□□ 2.27
PPP4C-209	ENST00000566749	HTT	P42858	3142 aa		29.2	■■■□□ 2.27
PPP4C-209	ENST00000566749	WDR46	O15213	610 aa	Known RBP	29.2	■■■□□ 2.26
PPP4C-209	ENST00000566749	PEX10	O60683	326 aa		29.2	■■■□□ 2.26
PPP4C-209	ENST00000566749	MYH4	Q9Y623	1939 aa		29.2	■■■□□ 2.26
PPP4C-209	ENST00000566749	MYPN	Q86TC9	1320 aa		29.2	■■■□□ 2.26
PPP4C-209	ENST00000566749	ZNF213	O14771	459 aa		29.19	■■■□□ 2.26
PPP4C-209	ENST00000566749	ORC4	O43929	436 aa		29.19	■■■□□ 2.26
PPP4C-209	ENST00000566749	TTLL1	O95922	423 aa		29.19	■■■□□ 2.26
PPP4C-209	ENST00000566749	FGR	P09769	529 aa		29.19	■■■□□ 2.26
PPP4C-209	ENST00000566749	COG2	Q14746	738 aa		29.19	■■■□□ 2.26
PPP4C-209	ENST00000566749	RRP12	Q5JTH9	1297 aa	Known RBP	29.19	■■■□□ 2.26
PPP4C-209	ENST00000566749	ERVK-9	P63128	1117 aa		29.18	■■■□□ 2.26
PPP4C-209	ENST00000566749	ERVK-24	P63145	666 aa		29.18	■■■□□ 2.26
PPP4C-209	ENST00000566749	COA7	Q96BR5	231 aa		29.18	■■■□□ 2.26
PPP4C-209	ENST00000566749	HOXC10	Q9NYD6	342 aa		29.18	■■■□□ 2.26
PPP4C-209	ENST00000566749	RABGAP1	Q9Y3P9	1069 aa		29.18	■■■□□ 2.26
PPP4C-209	ENST00000566749	SPDYE16	A6NNV3	312 aa	Predicted RBP	29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	FLOT1	O75955	427 aa		29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	PRKCZ	Q05513	592 aa		29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	AKNAD1	Q5T1N1	836 aa		29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	MFSD6	Q6ZSS7	791 aa		29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	RAET1E	Q8TD07	263 aa		29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	CTNNA3	Q9UI47	895 aa		29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	SLC9C1	Q4G0N8	1177 aa		29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	PPP4R3B	Q5MIZ7	849 aa		29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	POTEE	Q6S8J3	1075 aa		29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	LBX2	Q6XYB7	198 aa		29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	MKL1	Q969V6	931 aa		29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749	RNF41	Q9H4P4	317 aa	Predicted RBP	29.17	■■■□□ 2.26
PPP4C-209	ENST00000566749		F5H6K3	240 aa		29.16	■■■□□ 2.26
PPP4C-209	ENST00000566749	PC	P11498	1178 aa	Known RBP	29.16	■■■□□ 2.26
PPP4C-209	ENST00000566749	KLRC3	Q07444	240 aa		29.16	■■■□□ 2.26
PPP4C-209	ENST00000566749		Q3C1V9	767 aa		29.16	■■■□□ 2.26
PPP4C-209	ENST00000566749	TBC1D10C	Q8IV04	446 aa		29.16	■■■□□ 2.26
PPP4C-209	ENST00000566749	CCAR1	Q8IX12	1150 aa	Known RBP	29.16	■■■□□ 2.26
PPP4C-209	ENST00000566749	STAG1	Q8WVM7	1258 aa		29.16	■■■□□ 2.26
PPP4C-209	ENST00000566749	NBPF3	Q9H094	633 aa		29.16	■■■□□ 2.26
PPP4C-209	ENST00000566749	GABRQ	Q9UN88	632 aa		29.16	■■■□□ 2.26
PPP4C-209	ENST00000566749	DOCK3	Q8IZD9	2030 aa		29.15	■■■□□ 2.26
PPP4C-209	ENST00000566749	IMMT	Q16891	758 aa	Known RBP	29.15	■■■□□ 2.26
PPP4C-209	ENST00000566749	SAMD1	Q6SPF0	538 aa	Predicted RBP	29.15	■■■□□ 2.26
PPP4C-209	ENST00000566749	LRRC47	Q8N1G4	583 aa	Known RBP	29.15	■■■□□ 2.26
PPP4C-209	ENST00000566749	STX8	Q9UNK0	236 aa		29.15	■■■□□ 2.26
PPP4C-209	ENST00000566749	LAMA4	Q16363	1823 aa		29.14	■■■□□ 2.26
PPP4C-209	ENST00000566749	CENPF	P49454	3210 aa		29.14	■■■□□ 2.26
PPP4C-209	ENST00000566749	NDUFB10	O96000	172 aa		29.14	■■■□□ 2.26
PPP4C-209	ENST00000566749	BMP2KL	Q5H9B9	411 aa		29.14	■■■□□ 2.26
PPP4C-209	ENST00000566749	FAM83B	Q5T0W9	1011 aa		29.14	■■■□□ 2.26
PPP4C-209	ENST00000566749	NBPF11	Q86T75	865 aa		29.14	■■■□□ 2.26
PPP4C-209	ENST00000566749	IL17RB	Q9NRM6	502 aa		29.14	■■■□□ 2.26
PPP4C-209	ENST00000566749	SYNPO2	Q9UMS6	1093 aa		29.14	■■■□□ 2.26
PPP4C-209	ENST00000566749	SGSM2	O43147	1006 aa		29.13	■■■□□ 2.25
PPP4C-209	ENST00000566749	NMT2	O60551	498 aa		29.13	■■■□□ 2.25
PPP4C-209	ENST00000566749	CNMD	O75829	334 aa		29.13	■■■□□ 2.25
PPP4C-209	ENST00000566749	DSG3	P32926	999 aa		29.13	■■■□□ 2.25
PPP4C-209	ENST00000566749	FLT3LG	P49771	235 aa		29.13	■■■□□ 2.25
PPP4C-209	ENST00000566749	CCNA1	P78396	465 aa		29.13	■■■□□ 2.25
PPP4C-209	ENST00000566749	BTBD7	Q9P203	1132 aa		29.13	■■■□□ 2.25
PPP4C-209	ENST00000566749	RLF	Q13129	1914 aa		29.13	■■■□□ 2.25
PPP4C-209	ENST00000566749	ARMC5	Q96C12	935 aa		29.12	■■■□□ 2.25
PPP4C-209	ENST00000566749	NUP88	Q99567	741 aa	Predicted RBP	29.12	■■■□□ 2.25
PPP4C-209	ENST00000566749	MAPK4	P31152	587 aa		29.11	■■■□□ 2.25
PPP4C-209	ENST00000566749	ERICH6B	Q5W0A0	696 aa		29.11	■■■□□ 2.25
PPP4C-209	ENST00000566749	GMCL1P1	Q8NEA9	526 aa		29.11	■■■□□ 2.25
PPP4C-209	ENST00000566749	SH3TC2	Q8TF17	1288 aa		29.11	■■■□□ 2.25
PPP4C-209	ENST00000566749	PORCN	Q9H237	461 aa		29.11	■■■□□ 2.25
PPP4C-209	ENST00000566749	CWC22	Q9HCG8	908 aa	Known RBP	29.11	■■■□□ 2.25
PPP4C-209	ENST00000566749	FBXO28	Q9NVF7	368 aa		29.11	■■■□□ 2.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms