RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ROBO3Q96MS0 1386 aa17.55■□□□□ 0.4
FANCA-220ENST00000566409 MINDY4BA8MYZ0 360 aa17.55■□□□□ 0.4
FANCA-220ENST00000566409 PATL2C9JE40 543 aaKnown RBP17.55■□□□□ 0.4
FANCA-220ENST00000566409 EEF2P13639 858 aaKnown RBP17.55■□□□□ 0.4
FANCA-220ENST00000566409 CYP2B6P20813 491 aa17.55■□□□□ 0.4
FANCA-220ENST00000566409 RASA1P20936 1047 aa17.55■□□□□ 0.4
FANCA-220ENST00000566409 AAMPQ13685 434 aa17.55■□□□□ 0.4
FANCA-220ENST00000566409 MORN1Q5T089 497 aa17.55■□□□□ 0.4
FANCA-220ENST00000566409 GPR142Q7Z601 462 aa17.55■□□□□ 0.4
FANCA-220ENST00000566409 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
FANCA-220ENST00000566409 IFNL3Q8IZI9 196 aa17.55■□□□□ 0.4
FANCA-220ENST00000566409 SPICE1Q8N0Z3 855 aa17.55■□□□□ 0.4
FANCA-220ENST00000566409 U2AF1L4Q8WU68 220 aaKnown RBP17.55■□□□□ 0.4
FANCA-220ENST00000566409 TRIB2Q92519 343 aa17.55■□□□□ 0.4
FANCA-220ENST00000566409 PAK6Q9NQU5 681 aaPredicted RBP17.55■□□□□ 0.4
FANCA-220ENST00000566409 FOXP2O15409 715 aa17.54■□□□□ 0.4
FANCA-220ENST00000566409 SGPL1O95470 568 aa17.54■□□□□ 0.4
FANCA-220ENST00000566409 GNAT2P19087 354 aa17.54■□□□□ 0.4
FANCA-220ENST00000566409 COG2Q14746 738 aa17.54■□□□□ 0.4
FANCA-220ENST00000566409 NKX2-3Q8TAU0 364 aa17.54■□□□□ 0.4
FANCA-220ENST00000566409 NUDT12Q9BQG2 462 aa17.54■□□□□ 0.4
FANCA-220ENST00000566409 VCPKMTQ9H867 229 aa17.54■□□□□ 0.4
FANCA-220ENST00000566409 KANSL2Q9H9L4 492 aa17.54■□□□□ 0.4
FANCA-220ENST00000566409 ARHGEF10LQ9HCE6 1279 aa17.54■□□□□ 0.4
FANCA-220ENST00000566409 COL11A1P12107 1806 aaPredicted RBP17.54■□□□□ 0.4
FANCA-220ENST00000566409 HMGCRP04035 888 aa17.53■□□□□ 0.4
FANCA-220ENST00000566409 APPP05067 770 aa17.53■□□□□ 0.4
FANCA-220ENST00000566409 XRCC5P13010 732 aaKnown RBP17.53■□□□□ 0.4
FANCA-220ENST00000566409 LRRFIP1Q32MZ4 808 aaKnown RBP17.53■□□□□ 0.4
FANCA-220ENST00000566409 CCDC129Q6ZRS4 1044 aa17.53■□□□□ 0.4
FANCA-220ENST00000566409 PLEKHH3Q7Z736 793 aa17.53■□□□□ 0.4
FANCA-220ENST00000566409 LPAR1Q92633 364 aa17.53■□□□□ 0.4
FANCA-220ENST00000566409 DEFB118Q96PH6 123 aa17.53■□□□□ 0.4
FANCA-220ENST00000566409 TANGO6Q9C0B7 1094 aa17.53■□□□□ 0.4
FANCA-220ENST00000566409 LNPKQ9C0E8 428 aa17.53■□□□□ 0.4
FANCA-220ENST00000566409 MYH4Q9Y623 1939 aa17.53■□□□□ 0.4
FANCA-220ENST00000566409 PRDM1O75626 825 aa17.52■□□□□ 0.4
FANCA-220ENST00000566409 DSG3P32926 999 aa17.52■□□□□ 0.4
FANCA-220ENST00000566409 TDO2P48775 406 aa17.52■□□□□ 0.4
FANCA-220ENST00000566409 CCL14Q16627 93 aa17.52■□□□□ 0.4
FANCA-220ENST00000566409 B4GALNT3Q6L9W6 998 aa17.52■□□□□ 0.4
FANCA-220ENST00000566409 SOCS4Q8WXH5 440 aa17.52■□□□□ 0.4
FANCA-220ENST00000566409 RWDD1Q9H446 243 aaPredicted RBP17.52■□□□□ 0.4
FANCA-220ENST00000566409 HOXC10Q9NYD6 342 aa17.52■□□□□ 0.4
FANCA-220ENST00000566409 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
FANCA-220ENST00000566409 IGKV6D-41A0A0C4DH26 115 aa17.51■□□□□ 0.39
FANCA-220ENST00000566409 ATP2B2Q01814 1243 aa17.51■□□□□ 0.39
FANCA-220ENST00000566409 MAP3K21Q5TCX8 1036 aa17.51■□□□□ 0.39
FANCA-220ENST00000566409 CCAR1Q8IX12 1150 aaKnown RBP17.51■□□□□ 0.39
FANCA-220ENST00000566409 EVI5LQ96CN4 794 aa17.51■□□□□ 0.39
FANCA-220ENST00000566409 CRISPLD2Q9H0B8 497 aa17.51■□□□□ 0.39
FANCA-220ENST00000566409 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.51■□□□□ 0.39
FANCA-220ENST00000566409 MKNK2Q9HBH9 465 aa17.51■□□□□ 0.39
FANCA-220ENST00000566409 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
FANCA-220ENST00000566409 ZNFX1Q9P2E3 1918 aaKnown RBP17.51■□□□□ 0.39
FANCA-220ENST00000566409 RANBP2P49792 3224 aaKnown RBP17.5■□□□□ 0.39
FANCA-220ENST00000566409 WDR46O15213 610 aaKnown RBP17.5■□□□□ 0.39
FANCA-220ENST00000566409 FLOT1O75955 427 aa17.5■□□□□ 0.39
FANCA-220ENST00000566409 PTPREP23469 700 aa17.5■□□□□ 0.39
FANCA-220ENST00000566409 CCNA1P78396 465 aa17.5■□□□□ 0.39
FANCA-220ENST00000566409 ATG4CQ96DT6 458 aa17.5■□□□□ 0.39
FANCA-220ENST00000566409 MOV10L1Q9BXT6 1211 aaKnown RBP17.5■□□□□ 0.39
FANCA-220ENST00000566409 SH2D4AQ9H788 454 aa17.5■□□□□ 0.39
FANCA-220ENST00000566409 FBXO28Q9NVF7 368 aa17.5■□□□□ 0.39
FANCA-220ENST00000566409 FLRT1Q9NZU1 646 aa17.5■□□□□ 0.39
FANCA-220ENST00000566409 RPTORQ8N122 1335 aa17.49■□□□□ 0.39
FANCA-220ENST00000566409 TFRCP02786 760 aaKnown RBP17.49■□□□□ 0.39
FANCA-220ENST00000566409 RGS2P41220 211 aa17.49■□□□□ 0.39
FANCA-220ENST00000566409 NUCB1Q02818 461 aa17.49■□□□□ 0.39
FANCA-220ENST00000566409 MAP2K5Q13163 448 aa17.49■□□□□ 0.39
FANCA-220ENST00000566409 VPS53Q5VIR6 699 aa17.49■□□□□ 0.39
FANCA-220ENST00000566409 WDR78Q5VTH9 848 aa17.49■□□□□ 0.39
FANCA-220ENST00000566409 SPATC1LQ9H0A9 340 aa17.49■□□□□ 0.39
FANCA-220ENST00000566409 NYAP2Q9P242 653 aa17.49■□□□□ 0.39
FANCA-220ENST00000566409 ADAMTS5Q9UNA0 930 aa17.49■□□□□ 0.39
FANCA-220ENST00000566409 SLC15A5A6NIM6 579 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 PRKAR2AP13861 404 aaKnown RBP17.48■□□□□ 0.39
FANCA-220ENST00000566409 PPARAQ07869 468 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 CACNB2Q08289 660 aaPredicted RBP17.48■□□□□ 0.39
FANCA-220ENST00000566409 GRB14Q14449 540 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 CHD1LQ86WJ1 897 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 PLEKHM2Q8IWE5 1019 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 FAM227BQ96M60 508 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 APBA2Q99767 749 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 NACAP1Q9BZK3 213 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 NAPBQ9H115 298 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 HMX1Q9NP08 348 aaPredicted RBP17.48■□□□□ 0.39
FANCA-220ENST00000566409 INCENPQ9NQS7 918 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 TACC3Q9Y6A5 838 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 ALPK3Q96L96 1907 aa17.48■□□□□ 0.39
FANCA-220ENST00000566409 A0A0D9SFI3 127 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 FARP2O94887 1054 aaPredicted RBP17.47■□□□□ 0.39
FANCA-220ENST00000566409 IGHA2P01877 340 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 HOXC6P09630 235 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 ZKSCAN1P17029 563 aaPredicted RBP17.47■□□□□ 0.39
FANCA-220ENST00000566409 ERCC3P19447 782 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 MNX1P50219 401 aaPredicted RBP17.47■□□□□ 0.39
FANCA-220ENST00000566409 TMEM132BQ14DG7 1078 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 FAM83BQ5T0W9 1011 aa17.47■□□□□ 0.39
FANCA-220ENST00000566409 ZNF444Q8N0Y2 327 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms