RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 GBP1P32455 592 aa8.21□□□□□ -1.1
UBR1-205ENST00000564540 ZNF165P49910 485 aa8.21□□□□□ -1.1
UBR1-205ENST00000564540 HDLBPQ00341 1268 aaKnown RBP8.21□□□□□ -1.1
UBR1-205ENST00000564540 SLC23A3Q6PIS1 610 aa8.21□□□□□ -1.1
UBR1-205ENST00000564540 DTWD2Q8NBA8 298 aa8.21□□□□□ -1.1
UBR1-205ENST00000564540 PIWIL2Q8TC59 973 aaKnown RBP8.21□□□□□ -1.1
UBR1-205ENST00000564540 RNF141Q8WVD5 230 aa8.21□□□□□ -1.1
UBR1-205ENST00000564540 DUSP15Q9H1R2 295 aaPredicted RBP8.21□□□□□ -1.1
UBR1-205ENST00000564540 RGS13O14921 159 aa8.2□□□□□ -1.1
UBR1-205ENST00000564540 ITGB5P18084 799 aa8.2□□□□□ -1.1
UBR1-205ENST00000564540 THAP5Q7Z6K1 395 aa8.2□□□□□ -1.1
UBR1-205ENST00000564540 ATG4CQ96DT6 458 aa8.2□□□□□ -1.1
UBR1-205ENST00000564540 CDCP2Q5VXM1 449 aa8.19□□□□□ -1.1
UBR1-205ENST00000564540 NLRC3Q7RTR2 1065 aa8.19□□□□□ -1.1
UBR1-205ENST00000564540 NT5DC4Q86YG4 428 aa8.19□□□□□ -1.1
UBR1-205ENST00000564540 CNNM2Q9H8M5 875 aa8.19□□□□□ -1.1
UBR1-205ENST00000564540 LMCD1Q9NZU5 365 aa8.19□□□□□ -1.1
UBR1-205ENST00000564540 PAPLNO95428 1278 aa8.18□□□□□ -1.1
UBR1-205ENST00000564540 TMEM40Q8WWA1 233 aa8.18□□□□□ -1.1
UBR1-205ENST00000564540 ZNF428Q96B54 188 aa8.18□□□□□ -1.1
UBR1-205ENST00000564540 ESR1P03372 595 aa8.17□□□□□ -1.1
UBR1-205ENST00000564540 TPP2P29144 1249 aaPredicted RBP8.17□□□□□ -1.1
UBR1-205ENST00000564540 PAK2Q13177 524 aa8.17□□□□□ -1.1
UBR1-205ENST00000564540 ZNF654Q8IZM8 581 aa8.17□□□□□ -1.1
UBR1-205ENST00000564540 VWCEQ96DN2 955 aa8.17□□□□□ -1.1
UBR1-205ENST00000564540 ASPNQ9BXN1 380 aa8.17□□□□□ -1.1
UBR1-205ENST00000564540 KCNH3Q9ULD8 1083 aa8.17□□□□□ -1.1
UBR1-205ENST00000564540 SHISA3A0PJX4 238 aa8.16□□□□□ -1.1
UBR1-205ENST00000564540 SRFP11831 508 aa8.16□□□□□ -1.1
UBR1-205ENST00000564540 NME1P15531 152 aaKnown RBP8.16□□□□□ -1.1
UBR1-205ENST00000564540 GAB4Q2WGN9 574 aa8.16□□□□□ -1.1
UBR1-205ENST00000564540 GPR62Q9BZJ7 368 aa8.16□□□□□ -1.1
UBR1-205ENST00000564540 ZNRF3Q9ULT6 936 aa8.16□□□□□ -1.1
UBR1-205ENST00000564540 PPT2Q9UMR5 302 aa8.16□□□□□ -1.1
UBR1-205ENST00000564540 MEIS3P2A8K0S8 358 aa8.15□□□□□ -1.1
UBR1-205ENST00000564540 JUNBP17275 347 aaPredicted RBP8.15□□□□□ -1.1
UBR1-205ENST00000564540 CHMP4BP1P59074 171 aa8.15□□□□□ -1.1
UBR1-205ENST00000564540 ATG4DQ86TL0 474 aaPredicted RBP8.15□□□□□ -1.1
UBR1-205ENST00000564540 CREG2Q8IUH2 290 aa8.15□□□□□ -1.1
UBR1-205ENST00000564540 ASIC4Q96FT7 647 aa8.15□□□□□ -1.1
UBR1-205ENST00000564540 ZNF512BQ96KM6 892 aaPredicted RBP8.15□□□□□ -1.1
UBR1-205ENST00000564540 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.15□□□□□ -1.1
UBR1-205ENST00000564540 TRIT1Q9H3H1 467 aaKnown RBP8.15□□□□□ -1.1
UBR1-205ENST00000564540 GPATCH2Q9NW75 528 aa8.15□□□□□ -1.1
UBR1-205ENST00000564540 FAM86C2PA6NEL3 165 aa8.14□□□□□ -1.11
UBR1-205ENST00000564540 LRRFIP1Q32MZ4 808 aaKnown RBP8.14□□□□□ -1.11
UBR1-205ENST00000564540 TMPRSS7Q7RTY8 843 aa8.14□□□□□ -1.11
UBR1-205ENST00000564540 TSPYL5Q86VY4 417 aaPredicted RBP8.14□□□□□ -1.11
UBR1-205ENST00000564540 TMEM192Q8IY95 271 aa8.14□□□□□ -1.11
UBR1-205ENST00000564540 FERD3LQ96RJ6 166 aa8.14□□□□□ -1.11
UBR1-205ENST00000564540 SLC9A7Q96T83 725 aa8.14□□□□□ -1.11
UBR1-205ENST00000564540 C19orf73Q9NVV2 129 aa8.14□□□□□ -1.11
UBR1-205ENST00000564540 CTNND2Q9UQB3 1225 aa8.14□□□□□ -1.11
UBR1-205ENST00000564540 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.14□□□□□ -1.11
UBR1-205ENST00000564540 BIN1O00499 593 aa8.13□□□□□ -1.11
UBR1-205ENST00000564540 ACRP10323 421 aa8.13□□□□□ -1.11
UBR1-205ENST00000564540 NBPF12Q5TAG4 269 aaPredicted RBP8.13□□□□□ -1.11
UBR1-205ENST00000564540 FBXW10Q5XX13 1052 aa8.13□□□□□ -1.11
UBR1-205ENST00000564540 GINM1Q9NU53 330 aa8.13□□□□□ -1.11
UBR1-205ENST00000564540 SLAMF8Q9P0V8 285 aa8.13□□□□□ -1.11
UBR1-205ENST00000564540 DUSP13Q9UII6 198 aa8.13□□□□□ -1.11
UBR1-205ENST00000564540 CARMIL2Q6F5E8 1435 aa8.12□□□□□ -1.11
UBR1-205ENST00000564540 DNAJC25-GNG10A0A024R161 153 aa8.12□□□□□ -1.11
UBR1-205ENST00000564540 TNFRSF10CO14798 259 aa8.12□□□□□ -1.11
UBR1-205ENST00000564540 CLEC3AO75596 197 aa8.12□□□□□ -1.11
UBR1-205ENST00000564540 RNF4P78317 190 aa8.12□□□□□ -1.11
UBR1-205ENST00000564540 SNW1Q13573 536 aaKnown RBP8.12□□□□□ -1.11
UBR1-205ENST00000564540 RALGPS1Q5JS13 557 aa8.12□□□□□ -1.11
UBR1-205ENST00000564540 CCDC81Q6ZN84 652 aa8.12□□□□□ -1.11
UBR1-205ENST00000564540 FLAD1Q8NFF5 587 aa8.12□□□□□ -1.11
UBR1-205ENST00000564540 SLC6A18Q96N87 628 aa8.12□□□□□ -1.11
UBR1-205ENST00000564540 ALPK1Q96QP1 1244 aa8.12□□□□□ -1.11
UBR1-205ENST00000564540 CCNFP41002 786 aa8.11□□□□□ -1.11
UBR1-205ENST00000564540 EGR3Q06889 387 aa8.11□□□□□ -1.11
UBR1-205ENST00000564540 NBPF9Q3BBW0 867 aa8.11□□□□□ -1.11
UBR1-205ENST00000564540 FYB2Q5VWT5 728 aa8.11□□□□□ -1.11
UBR1-205ENST00000564540 RUFY4Q6ZNE9 571 aa8.11□□□□□ -1.11
UBR1-205ENST00000564540 TMC3Q7Z5M5 1100 aa8.11□□□□□ -1.11
UBR1-205ENST00000564540 GPRASP2Q96D09 838 aa8.11□□□□□ -1.11
UBR1-205ENST00000564540 KRTAP4-5Q9BYR2 181 aa8.11□□□□□ -1.11
UBR1-205ENST00000564540 EFR3BQ9Y2G0 817 aa8.11□□□□□ -1.11
UBR1-205ENST00000564540 PCDHA11Q9Y5I1 949 aa8.11□□□□□ -1.11
UBR1-205ENST00000564540 IMPDH2P12268 514 aa8.1□□□□□ -1.11
UBR1-205ENST00000564540 LTKP29376 864 aa8.1□□□□□ -1.11
UBR1-205ENST00000564540 RAD51AP2Q09MP3 1159 aa8.1□□□□□ -1.11
UBR1-205ENST00000564540 NMIQ13287 307 aaPredicted RBP8.1□□□□□ -1.11
UBR1-205ENST00000564540 CLEC16AQ2KHT3 1053 aa8.1□□□□□ -1.11
UBR1-205ENST00000564540 FAM168AQ92567 244 aa8.1□□□□□ -1.11
UBR1-205ENST00000564540 ACBD3Q9H3P7 528 aa8.1□□□□□ -1.11
UBR1-205ENST00000564540 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
UBR1-205ENST00000564540 GDNFP39905 211 aa8.09□□□□□ -1.11
UBR1-205ENST00000564540 ADAMTS10Q9H324 1103 aa8.09□□□□□ -1.11
UBR1-205ENST00000564540 GJA8P48165 433 aa8.08□□□□□ -1.12
UBR1-205ENST00000564540 SOX9P48436 509 aa8.08□□□□□ -1.12
UBR1-205ENST00000564540 HK2P52789 917 aa8.08□□□□□ -1.12
UBR1-205ENST00000564540 ZYXQ15942 572 aaKnown RBP8.08□□□□□ -1.12
UBR1-205ENST00000564540 INTS3Q68E01 1043 aaKnown RBP8.08□□□□□ -1.12
UBR1-205ENST00000564540 TTC6Q86TZ1 520 aa8.08□□□□□ -1.12
UBR1-205ENST00000564540 LSRQ86X29 649 aaPredicted RBP8.08□□□□□ -1.12
UBR1-205ENST00000564540 RASGRP4Q8TDF6 673 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms