RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ME3Q16798 604 aa15.1■□□□□ 0.01
SPG7-209ENST00000564047 SHROOM1Q2M3G4 852 aaPredicted RBP15.1■□□□□ 0.01
SPG7-209ENST00000564047 NOL9Q5SY16 702 aaKnown RBP15.1■□□□□ 0.01
SPG7-209ENST00000564047 CATIPQ7Z7H3 387 aa15.1■□□□□ 0.01
SPG7-209ENST00000564047 SCYL3Q8IZE3 742 aa15.1■□□□□ 0.01
SPG7-209ENST00000564047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.1■□□□□ 0.01
SPG7-209ENST00000564047 MKL1Q969V6 931 aa15.1■□□□□ 0.01
SPG7-209ENST00000564047 TMEM47Q9BQJ4 181 aa15.1■□□□□ 0.01
SPG7-209ENST00000564047 SYNPO2Q9UMS6 1093 aa15.1■□□□□ 0.01
SPG7-209ENST00000564047 GREB1LQ9C091 1923 aaPredicted RBP15.09■□□□□ 0.01
SPG7-209ENST00000564047 GOLGA8BA8MQT2 603 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 ZBTB43O43298 467 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 PFKFB2O60825 505 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 DDAH1O94760 285 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 CALM1P0DP23 149 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 CALM2P0DP24 149 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 CALM3P0DP25 149 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 INPP5BP32019 993 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 IREB2P48200 963 aaKnown RBP15.09■□□□□ 0.01
SPG7-209ENST00000564047 MAP3K9P80192 1104 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 ICA1Q05084 483 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 CUL4AQ13619 759 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 SIAH1Q8IUQ4 282 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 ZNF654Q8IZM8 581 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 CHMP4CQ96CF2 233 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 SLKQ9H2G2 1235 aaPredicted RBP15.09■□□□□ 0.01
SPG7-209ENST00000564047 CLIP2Q9UDT6 1046 aa15.09■□□□□ 0.01
SPG7-209ENST00000564047 LARGE1O95461 756 aa15.08■□□□□ 0
SPG7-209ENST00000564047 EEF2P13639 858 aaKnown RBP15.08■□□□□ 0
SPG7-209ENST00000564047 TROAPQ12815 778 aa15.08■□□□□ 0
SPG7-209ENST00000564047 PRKG1Q13976 671 aa15.08■□□□□ 0
SPG7-209ENST00000564047 PPP2R5BQ15173 497 aa15.08■□□□□ 0
SPG7-209ENST00000564047 ARMC9Q7Z3E5 817 aa15.08■□□□□ 0
SPG7-209ENST00000564047 CLEC10AQ8IUN9 316 aa15.08■□□□□ 0
SPG7-209ENST00000564047 PNMA1Q8ND90 353 aa15.08■□□□□ 0
SPG7-209ENST00000564047 MAP3K14Q99558 947 aa15.08■□□□□ 0
SPG7-209ENST00000564047 ARHGEF10LQ9HCE6 1279 aa15.08■□□□□ 0
SPG7-209ENST00000564047 SAGE1Q9NXZ1 904 aa15.08■□□□□ 0
SPG7-209ENST00000564047 NAP1L2Q9ULW6 460 aaPredicted RBP15.08■□□□□ 0
SPG7-209ENST00000564047 FZD1Q9UP38 647 aa15.08■□□□□ 0
SPG7-209ENST00000564047 HPS5Q9UPZ3 1129 aa15.08■□□□□ 0
SPG7-209ENST00000564047 NID2Q14112 1375 aa15.08■□□□□ 0
SPG7-209ENST00000564047 POLR2AP24928 1970 aaKnown RBP15.07■□□□□ 0
SPG7-209ENST00000564047 UNCXA6NJT0 531 aa15.07■□□□□ 0
SPG7-209ENST00000564047 HUNKP57058 714 aa15.07■□□□□ 0
SPG7-209ENST00000564047 FKBP1BP68106 108 aa15.07■□□□□ 0
SPG7-209ENST00000564047 STK3Q13188 491 aa15.07■□□□□ 0
SPG7-209ENST00000564047 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.07■□□□□ 0
SPG7-209ENST00000564047 MICU3Q86XE3 530 aa15.07■□□□□ 0
SPG7-209ENST00000564047 ANKRD13AQ8IZ07 590 aa15.07■□□□□ 0
SPG7-209ENST00000564047 GTF3C6Q969F1 213 aa15.07■□□□□ 0
SPG7-209ENST00000564047 ZKSCAN4Q969J2 545 aaPredicted RBP15.07■□□□□ 0
SPG7-209ENST00000564047 PICK1Q9NRD5 415 aa15.07■□□□□ 0
SPG7-209ENST00000564047 MYH8P13535 1937 aa15.07■□□□□ 0
SPG7-209ENST00000564047 GOLGA8AA7E2F4 631 aa15.06■□□□□ 0
SPG7-209ENST00000564047 USP17L5A8MUK1 530 aa15.06■□□□□ 0
SPG7-209ENST00000564047 DHX16O60231 1041 aaKnown RBP15.06■□□□□ 0
SPG7-209ENST00000564047 METAP2P50579 478 aaKnown RBP eCLIP15.06■□□□□ 0
SPG7-209ENST00000564047 ATP2B2Q01814 1243 aa15.06■□□□□ 0
SPG7-209ENST00000564047 SCRN1Q12765 414 aa15.06■□□□□ 0
SPG7-209ENST00000564047 TTLL12Q14166 644 aaPredicted RBP15.06■□□□□ 0
SPG7-209ENST00000564047 LRRC47Q8N1G4 583 aaKnown RBP15.06■□□□□ 0
SPG7-209ENST00000564047 NECAB1Q8N987 351 aa15.06■□□□□ 0
SPG7-209ENST00000564047 FANCBQ8NB91 859 aa15.06■□□□□ 0
SPG7-209ENST00000564047 NUP133Q8WUM0 1156 aa15.06■□□□□ 0
SPG7-209ENST00000564047 MYL10Q9BUA6 226 aa15.06■□□□□ 0
SPG7-209ENST00000564047 WDR18Q9BV38 432 aa15.06■□□□□ 0
SPG7-209ENST00000564047 SH2D4AQ9H788 454 aa15.06■□□□□ 0
SPG7-209ENST00000564047 AS3MTQ9HBK9 375 aa15.06■□□□□ 0
SPG7-209ENST00000564047 TMX2Q9Y320 296 aa15.06■□□□□ 0
SPG7-209ENST00000564047 CSADQ9Y600 493 aa15.06■□□□□ 0
SPG7-209ENST00000564047 CCDC196A0A1B0GTZ2 297 aa15.05■□□□□ -0
SPG7-209ENST00000564047 A0A1W2PRG0 241 aa15.05■□□□□ -0
SPG7-209ENST00000564047 PTPRAP18433 802 aa15.05■□□□□ -0
SPG7-209ENST00000564047 CCT2P78371 535 aaKnown RBP15.05■□□□□ -0
SPG7-209ENST00000564047 ST3GAL1Q11201 340 aa15.05■□□□□ -0
SPG7-209ENST00000564047 VGLL4Q14135 290 aa15.05■□□□□ -0
SPG7-209ENST00000564047 RTN1Q16799 776 aa15.05■□□□□ -0
SPG7-209ENST00000564047 LDLRAD1Q5T700 205 aa15.05■□□□□ -0
SPG7-209ENST00000564047 RAB11FIP4Q86YS3 637 aa15.05■□□□□ -0
SPG7-209ENST00000564047 CCDC83Q8IWF9 413 aa15.05■□□□□ -0
SPG7-209ENST00000564047 GMCL1P1Q8NEA9 526 aa15.05■□□□□ -0
SPG7-209ENST00000564047 CTCFLQ8NI51 663 aaPredicted RBP15.05■□□□□ -0
SPG7-209ENST00000564047 INTS4Q96HW7 963 aaKnown RBP15.05■□□□□ -0
SPG7-209ENST00000564047 ZIC5Q96T25 663 aa15.05■□□□□ -0
SPG7-209ENST00000564047 RBM28Q9NW13 759 aaKnown RBP15.05■□□□□ -0
SPG7-209ENST00000564047 SNCAIPQ9Y6H5 919 aa15.05■□□□□ -0
SPG7-209ENST00000564047 SNHG28P0DPA3 235 aa15.04■□□□□ -0
SPG7-209ENST00000564047 RXRAP19793 462 aa15.04■□□□□ -0
SPG7-209ENST00000564047 KIF5BP33176 963 aa15.04■□□□□ -0
SPG7-209ENST00000564047 GRM4Q14833 912 aa15.04■□□□□ -0
SPG7-209ENST00000564047 MOB2Q70IA6 237 aa15.04■□□□□ -0
SPG7-209ENST00000564047 ACER1Q8TDN7 264 aa15.04■□□□□ -0
SPG7-209ENST00000564047 LLPHQ9BRT6 129 aaKnown RBP15.04■□□□□ -0
SPG7-209ENST00000564047 GBA2Q9HCG7 927 aaPredicted RBP15.04■□□□□ -0
SPG7-209ENST00000564047 FAM217BQ9NTX9 383 aaPredicted RBP15.04■□□□□ -0
SPG7-209ENST00000564047 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.04■□□□□ -0
SPG7-209ENST00000564047 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.04■□□□□ -0
SPG7-209ENST00000564047 MKI67P46013 3256 aaKnown RBP15.04■□□□□ -0
SPG7-209ENST00000564047 F5H6K3 240 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms