RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 ANKRD23Q86SG2 305 aa16.6■□□□□ 0.25
AC009163.3-201ENST00000563554 IQCA1Q86XH1 822 aa16.6■□□□□ 0.25
AC009163.3-201ENST00000563554 LRRC47Q8N1G4 583 aaKnown RBP16.6■□□□□ 0.25
AC009163.3-201ENST00000563554 FAM43AQ8N2R8 423 aa16.6■□□□□ 0.25
AC009163.3-201ENST00000563554 PTPN18Q99952 460 aa16.6■□□□□ 0.25
AC009163.3-201ENST00000563554 MTMR4Q9NYA4 1195 aa16.6■□□□□ 0.25
AC009163.3-201ENST00000563554 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
AC009163.3-201ENST00000563554 STX8Q9UNK0 236 aa16.6■□□□□ 0.25
AC009163.3-201ENST00000563554 AGTPBP1Q9UPW5 1226 aa16.6■□□□□ 0.25
AC009163.3-201ENST00000563554 SMCHD1A6NHR9 2005 aa16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 EPB41L2O43491 1005 aaKnown RBP16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 ALDH1A1P00352 501 aa16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 ZKSCAN1P17029 563 aaPredicted RBP16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 MCCP23508 829 aa16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 TAF1CQ15572 869 aaPredicted RBP16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 TREML2Q5T2D2 321 aa16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 C12orf42Q96LP6 360 aa16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 ZKSCAN3Q9BRR0 538 aa16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 EMILIN3Q9NT22 766 aa16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 CLIP2Q9UDT6 1046 aa16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 TMX2Q9Y320 296 aa16.59■□□□□ 0.25
AC009163.3-201ENST00000563554 BAZ2BQ9UIF8 2168 aaKnown RBP16.58■□□□□ 0.25
AC009163.3-201ENST00000563554 PDHXO00330 501 aa16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 HSPA1AP0DMV8 641 aaKnown RBP16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 HSPA1BP0DMV9 641 aaKnown RBP16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 VCAM1P19320 739 aa16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 HSPA4P34932 840 aa16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 PABPC4Q13310 644 aaKnown RBP eCLIP16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 UBAC1Q9BSL1 405 aa16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 VCPKMTQ9H867 229 aa16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 ZCCHC17Q9NP64 241 aaKnown RBP16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 IL17RBQ9NRM6 502 aa16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 WBP1LQ9NX94 342 aa16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 RNF186Q9NXI6 227 aa16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 SAGE1Q9NXZ1 904 aa16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 TNKSO95271 1327 aa16.58■□□□□ 0.24
AC009163.3-201ENST00000563554 CA12O43570 354 aa16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 TRPA1O75762 1119 aa16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 NOVP48745 357 aa16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 GPAT2Q6NUI2 795 aa16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 CYB5R4Q7L1T6 521 aa16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 MB21D2Q8IYB1 491 aaPredicted RBP16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 SPICE1Q8N0Z3 855 aa16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 LPAR1Q92633 364 aa16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 IL17RAQ96F46 866 aa16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 PARK7Q99497 189 aaKnown RBP16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 TCP11L1Q9NUJ3 509 aa16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 ZSWIM5Q9P217 1185 aa16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 PNMA3Q9UL41 463 aa16.57■□□□□ 0.24
AC009163.3-201ENST00000563554 IRX3P78415 501 aaPredicted RBP16.56■□□□□ 0.24
AC009163.3-201ENST00000563554 KRT32Q14532 448 aa16.56■□□□□ 0.24
AC009163.3-201ENST00000563554 ADCK5Q3MIX3 580 aa16.56■□□□□ 0.24
AC009163.3-201ENST00000563554 CCDC178Q5BJE1 867 aa16.56■□□□□ 0.24
AC009163.3-201ENST00000563554 ZSCAN10Q96SZ4 725 aaPredicted RBP16.56■□□□□ 0.24
AC009163.3-201ENST00000563554 KIF2CQ99661 725 aa16.56■□□□□ 0.24
AC009163.3-201ENST00000563554 TSKSQ9UJT2 592 aa16.56■□□□□ 0.24
AC009163.3-201ENST00000563554 SYNPO2Q9UMS6 1093 aa16.56■□□□□ 0.24
AC009163.3-201ENST00000563554 SLC45A1Q9Y2W3 748 aa16.56■□□□□ 0.24
AC009163.3-201ENST00000563554 ERICH2A1L162 156 aa16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 WDR46O15213 610 aaKnown RBP16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 ANTXR2P58335 489 aa16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 CRHR2Q13324 411 aa16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 SART3Q15020 963 aaKnown RBP16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 TSGA10IPQ3SY00 556 aa16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 KIAA1755Q5JYT7 1200 aa16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 CHST3Q7LGC8 479 aa16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 BACH2Q9BYV9 841 aa16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 TANGO6Q9C0B7 1094 aa16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 RPAP3Q9H6T3 665 aaPredicted RBP16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 ZFYVE28Q9HCC9 887 aa16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 ISY1Q9ULR0 285 aaKnown RBP16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 MTMR7Q9Y216 660 aa16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 SNX14Q9Y5W7 946 aa16.55■□□□□ 0.24
AC009163.3-201ENST00000563554 TBC1D8O95759 1140 aa16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 NDUFB10O96000 172 aa16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 CYP2C8P10632 490 aa16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 TOP1P11387 765 aaKnown RBP16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 OSBPP22059 807 aa16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 MCM5P33992 734 aa16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 RCSD1Q6JBY9 416 aa16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 ENAHQ8N8S7 591 aaPredicted RBP16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 GMCL1P1Q8NEA9 526 aa16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 SMCR8Q8TEV9 937 aaPredicted RBP16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 MKL1Q969V6 931 aa16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 NEK1Q96PY6 1258 aa16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 TMEM47Q9BQJ4 181 aa16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 KAT14Q9H8E8 782 aa16.54■□□□□ 0.24
AC009163.3-201ENST00000563554 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 F5H6K3 240 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 IFIT3O14879 490 aaKnown RBP16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 FOXN1O15353 648 aa16.53■□□□□ 0.24
AC009163.3-201ENST00000563554 PRC1O43663 620 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms