RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 DDAH1O94760 285 aa8.59□□□□□ -1.03
LINC00557-201ENST00000563184 IGLV1-40P01703 118 aa8.59□□□□□ -1.03
LINC00557-201ENST00000563184 SLC51AQ86UW1 340 aa8.59□□□□□ -1.03
LINC00557-201ENST00000563184 SHKBP1Q8TBC3 707 aa8.59□□□□□ -1.03
LINC00557-201ENST00000563184 MKL1Q969V6 931 aa8.59□□□□□ -1.03
LINC00557-201ENST00000563184 ZSWIM4Q9H7M6 989 aa8.59□□□□□ -1.03
LINC00557-201ENST00000563184 TPX2Q9ULW0 747 aaKnown RBP8.59□□□□□ -1.03
LINC00557-201ENST00000563184 FAM221BA6H8Z2 402 aa8.58□□□□□ -1.04
LINC00557-201ENST00000563184 U2SURPO15042 1029 aaKnown RBP8.58□□□□□ -1.04
LINC00557-201ENST00000563184 SLC7A5Q01650 507 aa8.58□□□□□ -1.04
LINC00557-201ENST00000563184 BMS1Q14692 1282 aaKnown RBP8.58□□□□□ -1.04
LINC00557-201ENST00000563184 GNPTABQ3T906 1256 aa8.58□□□□□ -1.04
LINC00557-201ENST00000563184 AXDND1Q5T1B0 1012 aaPredicted RBP8.58□□□□□ -1.04
LINC00557-201ENST00000563184 KIAA1211LQ6NV74 962 aa8.58□□□□□ -1.04
LINC00557-201ENST00000563184 FBXL18Q96ME1 805 aa8.58□□□□□ -1.04
LINC00557-201ENST00000563184 PRDM5Q9NQX1 630 aaPredicted RBP8.58□□□□□ -1.04
LINC00557-201ENST00000563184 FAM86C1Q9NVL1 165 aa8.58□□□□□ -1.04
LINC00557-201ENST00000563184 SNTG2Q9NY99 539 aa8.58□□□□□ -1.04
LINC00557-201ENST00000563184 CDK11AQ9UQ88 783 aaPredicted RBP8.58□□□□□ -1.04
LINC00557-201ENST00000563184 PRR33A8MZF0 331 aa8.57□□□□□ -1.04
LINC00557-201ENST00000563184 WDR64B1ANS9 1081 aa8.57□□□□□ -1.04
LINC00557-201ENST00000563184 LRRN2O75325 713 aa8.57□□□□□ -1.04
LINC00557-201ENST00000563184 TP53P04637 393 aaPredicted RBP8.57□□□□□ -1.04
LINC00557-201ENST00000563184 NCAPHQ15003 741 aa8.57□□□□□ -1.04
LINC00557-201ENST00000563184 SFRP5Q5T4F7 317 aa8.57□□□□□ -1.04
LINC00557-201ENST00000563184 XP32Q5T750 250 aa8.57□□□□□ -1.04
LINC00557-201ENST00000563184 ZNF746Q6NUN9 644 aaPredicted RBP8.57□□□□□ -1.04
LINC00557-201ENST00000563184 Q96M66 194 aa8.57□□□□□ -1.04
LINC00557-201ENST00000563184 ASPNQ9BXN1 380 aa8.57□□□□□ -1.04
LINC00557-201ENST00000563184 CCDC113Q9H0I3 377 aa8.57□□□□□ -1.04
LINC00557-201ENST00000563184 IGF2BP3O00425 579 aaKnown RBP eCLIP8.56□□□□□ -1.04
LINC00557-201ENST00000563184 SHOXO15266 292 aa8.56□□□□□ -1.04
LINC00557-201ENST00000563184 BBS9Q3SYG4 887 aa8.56□□□□□ -1.04
LINC00557-201ENST00000563184 CYP27C1Q4G0S4 372 aa8.56□□□□□ -1.04
LINC00557-201ENST00000563184 DCAF15Q66K64 600 aa8.56□□□□□ -1.04
LINC00557-201ENST00000563184 C22orf34Q6ZV56 151 aa8.56□□□□□ -1.04
LINC00557-201ENST00000563184 DEPDC7Q96QD5 511 aa8.56□□□□□ -1.04
LINC00557-201ENST00000563184 SUSD2Q9UGT4 822 aa8.56□□□□□ -1.04
LINC00557-201ENST00000563184 GSC2O15499 205 aa8.55□□□□□ -1.04
LINC00557-201ENST00000563184 CBFA2T2O43439 604 aa8.55□□□□□ -1.04
LINC00557-201ENST00000563184 ZNF865P0CJ78 1059 aaPredicted RBP8.55□□□□□ -1.04
LINC00557-201ENST00000563184 CYP7A1P22680 504 aa8.55□□□□□ -1.04
LINC00557-201ENST00000563184 RNF4P78317 190 aa8.55□□□□□ -1.04
LINC00557-201ENST00000563184 CYP27A1Q02318 531 aa8.55□□□□□ -1.04
LINC00557-201ENST00000563184 LRP10Q7Z4F1 713 aa8.55□□□□□ -1.04
LINC00557-201ENST00000563184 ZDHHC13Q8IUH4 622 aa8.55□□□□□ -1.04
LINC00557-201ENST00000563184 SMARCC1Q92922 1105 aaPredicted RBP8.55□□□□□ -1.04
LINC00557-201ENST00000563184 MKRN2Q9H000 416 aaKnown RBP8.55□□□□□ -1.04
LINC00557-201ENST00000563184 GTF2IRD1Q9UHL9 959 aa8.55□□□□□ -1.04
LINC00557-201ENST00000563184 LOC105371045A0A1W2PR82 267 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 CCDC85CA6NKD9 419 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 PDPK1O15530 556 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 CBX7O95931 251 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 OXCT1P55809 520 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 CHMP4BP1P59074 171 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 SNW1Q13573 536 aaKnown RBP8.54□□□□□ -1.04
LINC00557-201ENST00000563184 RASGRF1Q13972 1273 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 NBPF9Q3BBW0 867 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 DUSP27Q5VZP5 1158 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 CCDC144CPQ8IYA2 1237 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 FAM181AQ8N9Y4 354 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 COX4I2Q96KJ9 171 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 SRPK1Q96SB4 655 aaKnown RBP8.54□□□□□ -1.04
LINC00557-201ENST00000563184 HAUS7Q99871 368 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 METTL22Q9BUU2 404 aaPredicted RBP8.54□□□□□ -1.04
LINC00557-201ENST00000563184 OSBPL1AQ9BXW6 950 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 KLHL25Q9H0H3 589 aa8.54□□□□□ -1.04
LINC00557-201ENST00000563184 PRR19A6NJB7 356 aa8.53□□□□□ -1.04
LINC00557-201ENST00000563184 SUSD5O60279 629 aa8.53□□□□□ -1.04
LINC00557-201ENST00000563184 AUHQ13825 339 aaKnown RBP8.53□□□□□ -1.04
LINC00557-201ENST00000563184 NFE2L2Q16236 605 aa8.53□□□□□ -1.04
LINC00557-201ENST00000563184 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
LINC00557-201ENST00000563184 C7orf61Q8IZ16 206 aa8.53□□□□□ -1.04
LINC00557-201ENST00000563184 ZNF513Q8N8E2 541 aaPredicted RBP8.53□□□□□ -1.04
LINC00557-201ENST00000563184 DTWD2Q8NBA8 298 aa8.53□□□□□ -1.04
LINC00557-201ENST00000563184 ATG3Q9NT62 314 aa8.53□□□□□ -1.04
LINC00557-201ENST00000563184 CAPN6Q9Y6Q1 641 aa8.53□□□□□ -1.04
LINC00557-201ENST00000563184 EPHX1P07099 455 aa8.52□□□□□ -1.05
LINC00557-201ENST00000563184 KIR3DL1P43629 444 aa8.52□□□□□ -1.05
LINC00557-201ENST00000563184 TNK2Q07912 1038 aa8.52□□□□□ -1.05
LINC00557-201ENST00000563184 GIMAP6Q6P9H5 292 aa8.52□□□□□ -1.05
LINC00557-201ENST00000563184 ZNF451Q9Y4E5 1061 aa8.52□□□□□ -1.05
LINC00557-201ENST00000563184 CPSF6Q16630 551 aaKnown RBP eCLIP8.51□□□□□ -1.05
LINC00557-201ENST00000563184 NKPD1Q17RQ9 610 aa8.51□□□□□ -1.05
LINC00557-201ENST00000563184 SLC10A6Q3KNW5 377 aa8.51□□□□□ -1.05
LINC00557-201ENST00000563184 ARTNQ5T4W7 220 aa8.51□□□□□ -1.05
LINC00557-201ENST00000563184 MFSD4AQ8N468 514 aa8.51□□□□□ -1.05
LINC00557-201ENST00000563184 MRFAP1L1Q96HT8 127 aa8.51□□□□□ -1.05
LINC00557-201ENST00000563184 PRDM14Q9GZV8 571 aa8.51□□□□□ -1.05
LINC00557-201ENST00000563184 PLAGL2Q9UPG8 496 aa8.51□□□□□ -1.05
LINC00557-201ENST00000563184 SCO2A0A1W2PP80 73 aa8.5□□□□□ -1.05
LINC00557-201ENST00000563184 CD247P20963 164 aa8.5□□□□□ -1.05
LINC00557-201ENST00000563184 LRP8Q14114 963 aa8.5□□□□□ -1.05
LINC00557-201ENST00000563184 HEATR6Q6AI08 1181 aaKnown RBP8.5□□□□□ -1.05
LINC00557-201ENST00000563184 SPATC1Q76KD6 591 aa8.5□□□□□ -1.05
LINC00557-201ENST00000563184 EEPD1Q7L9B9 569 aa8.5□□□□□ -1.05
LINC00557-201ENST00000563184 TMC3Q7Z5M5 1100 aa8.5□□□□□ -1.05
LINC00557-201ENST00000563184 NOP9Q86U38 636 aaKnown RBP8.5□□□□□ -1.05
LINC00557-201ENST00000563184 ST13P5Q8NFI4 369 aaPredicted RBP8.5□□□□□ -1.05
LINC00557-201ENST00000563184 FGD4Q96M96 766 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms