RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 TMEM179Q6ZVK1 233 aa15.68■□□□□ 0.1
SF3B3-202ENST00000562722 AMOTL1Q8IY63 956 aa15.68■□□□□ 0.1
SF3B3-202ENST00000562722 TDHQ8IZJ6 230 aa15.68■□□□□ 0.1
SF3B3-202ENST00000562722 DYNLL2Q96FJ2 89 aa15.68■□□□□ 0.1
SF3B3-202ENST00000562722 SENP6Q9GZR1 1112 aaPredicted RBP15.68■□□□□ 0.1
SF3B3-202ENST00000562722 BOLA2Q9H3K6 86 aa15.68■□□□□ 0.1
SF3B3-202ENST00000562722 ARHGEF10LQ9HCE6 1279 aa15.68■□□□□ 0.1
SF3B3-202ENST00000562722 PAG1Q9NWQ8 432 aa15.68■□□□□ 0.1
SF3B3-202ENST00000562722 SWAP70Q9UH65 585 aa15.68■□□□□ 0.1
SF3B3-202ENST00000562722 DDX20Q9UHI6 824 aaKnown RBP15.68■□□□□ 0.1
SF3B3-202ENST00000562722 DDX19BQ9UMR2 479 aa15.68■□□□□ 0.1
SF3B3-202ENST00000562722 TCRBV5S4A2TA0A5A2 114 aa15.67■□□□□ 0.1
SF3B3-202ENST00000562722 MSCO60682 206 aa15.67■□□□□ 0.1
SF3B3-202ENST00000562722 RAB11FIP3O75154 756 aa15.67■□□□□ 0.1
SF3B3-202ENST00000562722 FLOT1O75955 427 aa15.67■□□□□ 0.1
SF3B3-202ENST00000562722 MBD4O95243 580 aa15.67■□□□□ 0.1
SF3B3-202ENST00000562722 HOXC6P09630 235 aa15.67■□□□□ 0.1
SF3B3-202ENST00000562722 SPICE1Q8N0Z3 855 aa15.67■□□□□ 0.1
SF3B3-202ENST00000562722 SLC17A8Q8NDX2 589 aa15.67■□□□□ 0.1
SF3B3-202ENST00000562722 NPLOC4Q8TAT6 608 aa15.67■□□□□ 0.1
SF3B3-202ENST00000562722 DDRGK1Q96HY6 314 aa15.67■□□□□ 0.1
SF3B3-202ENST00000562722 MOV10L1Q9BXT6 1211 aaKnown RBP15.67■□□□□ 0.1
SF3B3-202ENST00000562722 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.67■□□□□ 0.1
SF3B3-202ENST00000562722 SH2D4AQ9H788 454 aa15.67■□□□□ 0.1
SF3B3-202ENST00000562722 PRKAB2O43741 272 aa15.66■□□□□ 0.1
SF3B3-202ENST00000562722 MYCNP04198 464 aaPredicted RBP15.66■□□□□ 0.1
SF3B3-202ENST00000562722 ERCC3P19447 782 aa15.66■□□□□ 0.1
SF3B3-202ENST00000562722 ADORA2AP29274 412 aa15.66■□□□□ 0.1
SF3B3-202ENST00000562722 ATN1P54259 1190 aaPredicted RBP15.66■□□□□ 0.1
SF3B3-202ENST00000562722 MDM2Q00987 491 aaPredicted RBP15.66■□□□□ 0.1
SF3B3-202ENST00000562722 ICA1Q05084 483 aa15.66■□□□□ 0.1
SF3B3-202ENST00000562722 CLEC10AQ8IUN9 316 aa15.66■□□□□ 0.1
SF3B3-202ENST00000562722 DEFB123Q8N688 67 aa15.66■□□□□ 0.1
SF3B3-202ENST00000562722 LPAR1Q92633 364 aa15.66■□□□□ 0.1
SF3B3-202ENST00000562722 SPATC1LQ9H0A9 340 aa15.66■□□□□ 0.1
SF3B3-202ENST00000562722 AKR1B1P15121 316 aa15.65■□□□□ 0.1
SF3B3-202ENST00000562722 ADD2P35612 726 aa15.65■□□□□ 0.1
SF3B3-202ENST00000562722 LRIT3Q3SXY7 679 aa15.65■□□□□ 0.1
SF3B3-202ENST00000562722 SLFNL1Q499Z3 407 aa15.65■□□□□ 0.1
SF3B3-202ENST00000562722 NCAPG2Q86XI2 1143 aa15.65■□□□□ 0.1
SF3B3-202ENST00000562722 MB21D1Q8N884 522 aa15.65■□□□□ 0.1
SF3B3-202ENST00000562722 LBHD1Q9BQE6 289 aaPredicted RBP15.65■□□□□ 0.1
SF3B3-202ENST00000562722 CHMP4BQ9H444 224 aaKnown RBP15.65■□□□□ 0.1
SF3B3-202ENST00000562722 ATP8A2Q9NTI2 1148 aa15.65■□□□□ 0.1
SF3B3-202ENST00000562722 SLC5A4Q9NY91 659 aa15.65■□□□□ 0.1
SF3B3-202ENST00000562722 PRKAG2Q9UGJ0 569 aa15.65■□□□□ 0.1
SF3B3-202ENST00000562722 CYP2D7A0A087X1C5 515 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 DNM1LO00429 736 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 STRNO43815 780 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 RAD21O60216 631 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 ATP5JP18859 108 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 DSG3P32926 999 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 Q7L0L9 218 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 SIRT2Q8IXJ6 389 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 SHCBP1Q8NEM2 672 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 TRPV1Q8NER1 839 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 ATG4CQ96DT6 458 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 MROH8Q9H579 483 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 ZBTB40Q9NUA8 1239 aa15.64■□□□□ 0.09
SF3B3-202ENST00000562722 KBTBD13C9JR72 458 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 CYBAP13498 195 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 KIAA1755Q5JYT7 1200 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 GJC2Q5T442 439 aaPredicted RBP15.63■□□□□ 0.09
SF3B3-202ENST00000562722 ANO1Q5XXA6 986 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 OLFML2BQ68BL8 750 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 GPR153Q6NV75 609 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 ARRDC4Q8NCT1 418 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 CCDC17Q96LX7 622 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 HAUS7Q99871 368 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 VCPKMTQ9H867 229 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 TMX2Q9Y320 296 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 SLC4A4Q9Y6R1 1079 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 LAMA3Q16787 3333 aa15.63■□□□□ 0.09
SF3B3-202ENST00000562722 USP17L12C9JPN9 530 aa15.62■□□□□ 0.09
SF3B3-202ENST00000562722 USP17L21D6R901 530 aa15.62■□□□□ 0.09
SF3B3-202ENST00000562722 CDK8P49336 464 aa15.62■□□□□ 0.09
SF3B3-202ENST00000562722 ZSCAN25Q6NSZ9 544 aa15.62■□□□□ 0.09
SF3B3-202ENST00000562722 ATP11BQ9Y2G3 1177 aa15.62■□□□□ 0.09
SF3B3-202ENST00000562722 WDR46O15213 610 aaKnown RBP15.61■□□□□ 0.09
SF3B3-202ENST00000562722 COBLO75128 1261 aa15.61■□□□□ 0.09
SF3B3-202ENST00000562722 CHGBP05060 677 aa15.61■□□□□ 0.09
SF3B3-202ENST00000562722 FCER1AP12319 257 aa15.61■□□□□ 0.09
SF3B3-202ENST00000562722 RTP1P59025 263 aa15.61■□□□□ 0.09
SF3B3-202ENST00000562722 UBE3CQ15386 1083 aa15.61■□□□□ 0.09
SF3B3-202ENST00000562722 C12orf60Q5U649 245 aa15.61■□□□□ 0.09
SF3B3-202ENST00000562722 C16orf86Q6ZW13 317 aa15.61■□□□□ 0.09
SF3B3-202ENST00000562722 LRRCC1Q9C099 1032 aa15.61■□□□□ 0.09
SF3B3-202ENST00000562722 FRMPD3Q5JV73 1810 aa15.61■□□□□ 0.09
SF3B3-202ENST00000562722 SMIM22K7EJ46 135 aa15.6■□□□□ 0.09
SF3B3-202ENST00000562722 SEPT4O43236 478 aa15.6■□□□□ 0.09
SF3B3-202ENST00000562722 EEF2P13639 858 aaKnown RBP15.6■□□□□ 0.09
SF3B3-202ENST00000562722 PRAMEF19Q5SWL8 479 aa15.6■□□□□ 0.09
SF3B3-202ENST00000562722 SIAH1Q8IUQ4 282 aa15.6■□□□□ 0.09
SF3B3-202ENST00000562722 ABRAQ8N0Z2 381 aa15.6■□□□□ 0.09
SF3B3-202ENST00000562722 MMP19Q99542 508 aa15.6■□□□□ 0.09
SF3B3-202ENST00000562722 KANSL2Q9H9L4 492 aa15.6■□□□□ 0.09
SF3B3-202ENST00000562722 GOPCQ9HD26 462 aa15.6■□□□□ 0.09
SF3B3-202ENST00000562722 PRDM5Q9NQX1 630 aaPredicted RBP15.6■□□□□ 0.09
SF3B3-202ENST00000562722 ZNF236Q9UL36 1845 aa15.59■□□□□ 0.09
SF3B3-202ENST00000562722 DLL1O00548 723 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms