RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 HSPA1BP0DMV9 641 aaKnown RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 MX1P20591 662 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 ATP4AP20648 1035 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 ERCC5P28715 1186 aaPredicted RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 ALDH3A1P30838 453 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 CCNG1P51959 295 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 PMS2P54278 862 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 BPIFB4P59827 614 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 CYP4A11Q02928 519 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 KIF5AQ12840 1032 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 RIPK1Q13546 671 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 SHROOM1Q2M3G4 852 aaPredicted RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 LRRFIP1Q32MZ4 808 aaKnown RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 EFCAB2Q5VUJ9 269 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 MSL1Q68DK7 614 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 TMEM53Q6P2H8 277 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 GIMAP6Q6P9H5 292 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 ARHGAP27Q6ZUM4 889 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 HDXQ7Z353 690 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 TMC4Q7Z404 712 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 RAB11FIP4Q86YS3 637 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 DRC7Q8IY82 874 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 NDUFAF2Q8N183 169 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 LILRB2Q8N423 598 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 TEX9Q8N6V9 391 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 KIAA1958Q8N8K9 716 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 CCHCR1Q8TD31 782 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 PTCD2Q8WV60 388 aaKnown RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 IRGQQ8WZA9 623 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 AZIN2Q96A70 460 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 VTI1AQ96AJ9 217 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 ZNF653Q96CK0 615 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 OPTNQ96CV9 577 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 IFT43Q96FT9 208 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 PRAM1Q96QH2 718 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 CENPOQ9BU64 300 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 RTFDC1Q9BY42 306 aaPredicted RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 EIF2AQ9BY44 585 aaKnown RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 ALDH8A1Q9H2A2 487 aaPredicted RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 BICC1Q9H694 974 aaKnown RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 VIPAS39Q9H9C1 493 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 ACTR5Q9H9F9 607 aaPredicted RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 TCF7L2Q9NQB0 619 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 INIPQ9NRY2 104 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 AATFQ9NY61 560 aaKnown RBP eCLIP5.53□□□□□ -1.52
TCF4-215ENST00000562638 ZFATQ9P243 1243 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 XPO7Q9UIA9 1087 aaKnown RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 CFAP45Q9UL16 551 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 L1RE1Q9UN81 338 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 CEP131Q9UPN4 1083 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 CFAP74Q9C0B2 1584 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 POLR3AO14802 1390 aaPredicted RBP5.53□□□□□ -1.52
TCF4-215ENST00000562638 LMTK2Q8IWU2 1503 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 ABCC2Q92887 1545 aa5.53□□□□□ -1.52
TCF4-215ENST00000562638 FANCD2Q9BXW9 1451 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 UBN2Q6ZU65 1347 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 NCKAP5LQ9HCH0 1330 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 RASSF10A6NK89 507 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 USP27XA6NNY8 438 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 A6NNZ2 444 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 TK2O00142 265 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 WNT7AO00755 349 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 NDUFAB1O14561 156 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 RGL2O15211 777 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 SLC26A4O43511 780 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 NDUFB5O43674 189 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 CYTH3O43739 400 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 AKR1B10O60218 316 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 CDC45O75419 566 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 CYP1A2P05177 515 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 HCLS1P14317 486 aaPredicted RBP5.52□□□□□ -1.53
TCF4-215ENST00000562638 ZNF75DP51815 510 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 SH3BGRP55822 239 aaPredicted RBP5.52□□□□□ -1.53
TCF4-215ENST00000562638 CCZ1BP86790 482 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 CCZ1P86791 482 aaPredicted RBP5.52□□□□□ -1.53
TCF4-215ENST00000562638 STIM1Q13586 685 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 MAP7Q14244 749 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 COG2Q14746 738 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 SPCS2Q15005 226 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 PPP2R5BQ15173 497 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 NEUROD2Q15784 382 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 ENOX2Q16206 610 aaKnown RBP5.52□□□□□ -1.53
TCF4-215ENST00000562638 CCDC144BQ3MJ40 725 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 TUBB8Q3ZCM7 444 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 CFAP157Q5JU67 520 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 ZNF362Q5T0B9 420 aaPredicted RBP5.52□□□□□ -1.53
TCF4-215ENST00000562638 TBC1D9BQ66K14 1250 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 KAZNQ674X7 775 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 PRPF40BQ6NWY9 871 aaKnown RBP5.52□□□□□ -1.53
TCF4-215ENST00000562638 CYB5D1Q6P9G0 228 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 PI16Q6UXB8 463 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 DBX2Q6ZNG2 339 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 ERICH1Q86X53 443 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 CCDC144CPQ8IYA2 1237 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 FUKQ8N0W3 1084 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 DCLK2Q8N568 766 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 CCDC155Q8N6L0 562 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 SVIPQ8NHG7 77 aa5.52□□□□□ -1.53
TCF4-215ENST00000562638 LILRB1Q8NHL6 650 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms