RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 FDPSP14324 419 aaKnown RBP11.95□□□□□ -0.5
USP3-219ENST00000561326 HIRAP54198 1017 aaPredicted RBP11.95□□□□□ -0.5
USP3-219ENST00000561326 PKP1Q13835 747 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 SEPT2Q15019 361 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 ASPRV1Q53RT3 343 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 CLEC17AQ6ZS10 378 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 TMTC3Q6ZXV5 915 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 PNMA8AQ86V59 439 aaPredicted RBP11.95□□□□□ -0.5
USP3-219ENST00000561326 SULF1Q8IWU6 871 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 CCDC82Q8N4S0 544 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 PHKBQ93100 1093 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 TEPSINQ96N21 525 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 ALG1Q9BT22 464 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 ZNF341Q9BYN7 854 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 ZSCAN16Q9H4T2 348 aaPredicted RBP11.95□□□□□ -0.5
USP3-219ENST00000561326 ARHGEF10LQ9HCE6 1279 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 MTMR6Q9Y217 621 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 ZDHHC9Q9Y397 364 aa11.95□□□□□ -0.5
USP3-219ENST00000561326 ASTN2O75129 1339 aaPredicted RBP11.94□□□□□ -0.5
USP3-219ENST00000561326 PALM3A6NDB9 673 aaPredicted RBP11.94□□□□□ -0.5
USP3-219ENST00000561326 KLRF2D3W0D1 207 aa11.94□□□□□ -0.5
USP3-219ENST00000561326 CTNND1O60716 968 aaKnown RBP11.94□□□□□ -0.5
USP3-219ENST00000561326 F13A1P00488 732 aa11.94□□□□□ -0.5
USP3-219ENST00000561326 EEF2P13639 858 aaKnown RBP11.94□□□□□ -0.5
USP3-219ENST00000561326 PTMSP20962 102 aa11.94□□□□□ -0.5
USP3-219ENST00000561326 EPHX2P34913 555 aa11.94□□□□□ -0.5
USP3-219ENST00000561326 CAP2P40123 477 aa11.94□□□□□ -0.5
USP3-219ENST00000561326 ICA1Q05084 483 aa11.94□□□□□ -0.5
USP3-219ENST00000561326 GPATCH4Q5T3I0 446 aaKnown RBP11.94□□□□□ -0.5
USP3-219ENST00000561326 FOXD4L5Q5VV16 416 aaPredicted RBP11.94□□□□□ -0.5
USP3-219ENST00000561326 NBPF11Q86T75 865 aa11.94□□□□□ -0.5
USP3-219ENST00000561326 FOXD4L4Q8WXT5 416 aaPredicted RBP11.94□□□□□ -0.5
USP3-219ENST00000561326 SH2D4AQ9H788 454 aa11.94□□□□□ -0.5
USP3-219ENST00000561326 MTMR7Q9Y216 660 aa11.94□□□□□ -0.5
USP3-219ENST00000561326 V9GY48 417 aaPredicted RBP11.94□□□□□ -0.5
USP3-219ENST00000561326 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
USP3-219ENST00000561326 DTNBO60941 627 aa11.93□□□□□ -0.5
USP3-219ENST00000561326 SAFBQ15424 915 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP3-219ENST00000561326 NFKBIBQ15653 356 aa11.93□□□□□ -0.5
USP3-219ENST00000561326 NBPF12Q5TAG4 269 aaPredicted RBP11.93□□□□□ -0.5
USP3-219ENST00000561326 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
USP3-219ENST00000561326 USP48Q86UV5 1035 aa11.93□□□□□ -0.5
USP3-219ENST00000561326 SRBD1Q8N5C6 995 aaKnown RBP11.93□□□□□ -0.5
USP3-219ENST00000561326 FBXO18Q8NFZ0 1043 aa11.93□□□□□ -0.5
USP3-219ENST00000561326 DCAF4Q8WV16 495 aa11.93□□□□□ -0.5
USP3-219ENST00000561326 GOPCQ9HD26 462 aa11.93□□□□□ -0.5
USP3-219ENST00000561326 MAD2L2Q9UI95 211 aa11.93□□□□□ -0.5
USP3-219ENST00000561326 ZBTB21Q9ULJ3 1066 aa11.93□□□□□ -0.5
USP3-219ENST00000561326 SCAF8Q9UPN6 1271 aaKnown RBP11.93□□□□□ -0.5
USP3-219ENST00000561326 PPFIA3O75145 1194 aa11.92□□□□□ -0.5
USP3-219ENST00000561326 PLEKHA8P1O95397 391 aa11.92□□□□□ -0.5
USP3-219ENST00000561326 BAG4O95429 457 aaKnown RBP11.92□□□□□ -0.5
USP3-219ENST00000561326 SLURP2P0DP57 97 aa11.92□□□□□ -0.5
USP3-219ENST00000561326 PDHBP11177 359 aa11.92□□□□□ -0.5
USP3-219ENST00000561326 GUCY1A2P33402 732 aa11.92□□□□□ -0.5
USP3-219ENST00000561326 MCM4P33991 863 aa11.92□□□□□ -0.5
USP3-219ENST00000561326 NF2P35240 595 aa11.92□□□□□ -0.5
USP3-219ENST00000561326 USP17L2Q6R6M4 530 aa11.92□□□□□ -0.5
USP3-219ENST00000561326 CMTR1Q8N1G2 835 aaKnown RBP11.92□□□□□ -0.5
USP3-219ENST00000561326 LRRC47Q8N1G4 583 aaKnown RBP11.92□□□□□ -0.5
USP3-219ENST00000561326 GMCL1P1Q8NEA9 526 aa11.92□□□□□ -0.5
USP3-219ENST00000561326 SPZ1Q9BXG8 430 aa11.92□□□□□ -0.5
USP3-219ENST00000561326 WDR90Q96KV7 1748 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 DOCK1Q14185 1865 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 DDX11L8A8MPP1 907 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 USP17L5A8MUK1 530 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 PHF20L1A8MW92 1017 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 F5H6K3 240 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 RAD21O60216 631 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 PPP1R12BO60237 982 aaPredicted RBP11.91□□□□□ -0.5
USP3-219ENST00000561326 SNHG28P0DPA3 235 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 SLC1A4P43007 532 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 KLRC3Q07444 240 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 ZNF543Q08ER8 600 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 FUT2Q10981 343 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 GNL2Q13823 731 aaKnown RBP11.91□□□□□ -0.5
USP3-219ENST00000561326 CSPP1Q1MSJ5 1256 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 CCDC96Q2M329 555 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 SLFN13Q68D06 897 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 CDC37L1Q7L3B6 337 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 KRT26Q7Z3Y9 468 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 FAM177A1Q8N128 213 aaPredicted RBP11.91□□□□□ -0.5
USP3-219ENST00000561326 STAG2Q8N3U4 1231 aa11.91□□□□□ -0.5
USP3-219ENST00000561326 RRP36Q96EU6 259 aaKnown RBP11.91□□□□□ -0.5
USP3-219ENST00000561326 TAF1DQ9H5J8 278 aaPredicted RBP11.91□□□□□ -0.5
USP3-219ENST00000561326 SEC63Q9UGP8 760 aaKnown RBP11.91□□□□□ -0.5
USP3-219ENST00000561326 ISY1Q9ULR0 285 aaKnown RBP11.91□□□□□ -0.5
USP3-219ENST00000561326 GOLGA8HP0CJ92 632 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 SCG2P13521 617 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 VEGFAP15692 232 aaPredicted RBP11.9□□□□□ -0.5
USP3-219ENST00000561326 FOSBP53539 338 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 GUCY1B3Q02153 619 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 RRP1BQ14684 758 aaKnown RBP11.9□□□□□ -0.5
USP3-219ENST00000561326 PFKFB3Q16875 520 aaPredicted RBP11.9□□□□□ -0.5
USP3-219ENST00000561326 EAPPQ56P03 285 aaPredicted RBP11.9□□□□□ -0.5
USP3-219ENST00000561326 KRT40Q6A162 431 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 ATL3Q6DD88 541 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 BRAPQ7Z569 592 aa11.9□□□□□ -0.5
USP3-219ENST00000561326 CLEC10AQ8IUN9 316 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms