RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 IVNS1ABPQ9Y6Y0 642 aa12.96□□□□□ -0.33
TPM1-227ENST00000560970 UNC80Q8N2C7 3258 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 SLC15A5A6NIM6 579 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 SPDYE16A6NNV3 312 aaPredicted RBP12.95□□□□□ -0.34
TPM1-227ENST00000560970 MSCO60682 206 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 IGHDP01880 384 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 MFSD14CQ5VZR4 134 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 LHX8Q68G74 356 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 CATSPERGQ6ZRH7 1159 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 ACER1Q8TDN7 264 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
TPM1-227ENST00000560970 CRNKL1Q9BZJ0 848 aaKnown RBP12.95□□□□□ -0.34
TPM1-227ENST00000560970 BOLA2Q9H3K6 86 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 RPAP3Q9H6T3 665 aaPredicted RBP12.95□□□□□ -0.34
TPM1-227ENST00000560970 CABP5Q9NP86 173 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 LRRC37A2A6NM11 1700 aa12.95□□□□□ -0.34
TPM1-227ENST00000560970 SALL3Q9BXA9 1300 aa12.94□□□□□ -0.34
TPM1-227ENST00000560970 HOXC6P09630 235 aa12.94□□□□□ -0.34
TPM1-227ENST00000560970 PDE6AP16499 860 aa12.94□□□□□ -0.34
TPM1-227ENST00000560970 ATP5JP18859 108 aa12.94□□□□□ -0.34
TPM1-227ENST00000560970 PTPREP23469 700 aa12.94□□□□□ -0.34
TPM1-227ENST00000560970 PLCD1P51178 756 aa12.94□□□□□ -0.34
TPM1-227ENST00000560970 GABPAQ06546 454 aa12.94□□□□□ -0.34
TPM1-227ENST00000560970 LRRC26Q2I0M4 334 aa12.94□□□□□ -0.34
TPM1-227ENST00000560970 LRIT3Q3SXY7 679 aa12.94□□□□□ -0.34
TPM1-227ENST00000560970 UBE2OQ9C0C9 1292 aaKnown RBP12.94□□□□□ -0.34
TPM1-227ENST00000560970 FLRT1Q9NZU1 646 aa12.94□□□□□ -0.34
TPM1-227ENST00000560970 DDX20Q9UHI6 824 aaKnown RBP12.94□□□□□ -0.34
TPM1-227ENST00000560970 GTF3C3Q9Y5Q9 886 aa12.94□□□□□ -0.34
TPM1-227ENST00000560970 MCM3APO60318 1980 aa12.93□□□□□ -0.34
TPM1-227ENST00000560970 GOLIM4O00461 696 aa12.93□□□□□ -0.34
TPM1-227ENST00000560970 POLR3DP05423 398 aaPredicted RBP12.93□□□□□ -0.34
TPM1-227ENST00000560970 GUCY1A2P33402 732 aa12.93□□□□□ -0.34
TPM1-227ENST00000560970 SEPT2Q15019 361 aa12.93□□□□□ -0.34
TPM1-227ENST00000560970 HAUS7Q99871 368 aa12.93□□□□□ -0.34
TPM1-227ENST00000560970 TANGO6Q9C0B7 1094 aa12.93□□□□□ -0.34
TPM1-227ENST00000560970 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
TPM1-227ENST00000560970 MCM9Q9NXL9 1143 aa12.93□□□□□ -0.34
TPM1-227ENST00000560970 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
TPM1-227ENST00000560970 ZNF532Q9HCE3 1301 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 DNM1LO00429 736 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 MPHOSPH10O00566 681 aaKnown RBP12.92□□□□□ -0.34
TPM1-227ENST00000560970 CHGBP05060 677 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 CYBAP13498 195 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 SLFNL1Q499Z3 407 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 SLC9C2Q5TAH2 1124 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 ANKRD45Q5TZF3 282 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 TMEM179Q6ZVK1 233 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 SMC5Q8IY18 1101 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 LPAR1Q92633 364 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 PAG1Q9NWQ8 432 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
TPM1-227ENST00000560970 TCRBV5S4A2TA0A5A2 114 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 EVX2Q03828 476 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 LCORLQ8N3X6 602 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 DEFB123Q8N688 67 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 SLC17A8Q8NDX2 589 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 SHCBP1Q8NEM2 672 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 NPLOC4Q8TAT6 608 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 PI4K2BQ8TCG2 481 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 SDR42E1Q8WUS8 393 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 SH2D4AQ9H788 454 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 DCP1AQ9NPI6 582 aaPredicted RBP12.91□□□□□ -0.34
TPM1-227ENST00000560970 ECHDC1Q9NTX5 307 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 SWAP70Q9UH65 585 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
TPM1-227ENST00000560970 SMCHD1A6NHR9 2005 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 ADORA2AP29274 412 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 CNGA1P29973 690 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 CYP2C19P33261 490 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 MDM2Q00987 491 aaPredicted RBP12.9□□□□□ -0.34
TPM1-227ENST00000560970 ATP2B2Q01814 1243 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 ICA1Q05084 483 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 OLFML2BQ68BL8 750 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 Q7L0L9 218 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 MB21D1Q8N884 522 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 SLC44A5Q8NCS7 719 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 MOV10L1Q9BXT6 1211 aaKnown RBP12.9□□□□□ -0.34
TPM1-227ENST00000560970 SPATC1LQ9H0A9 340 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 RWDD1Q9H446 243 aaPredicted RBP12.9□□□□□ -0.34
TPM1-227ENST00000560970 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 CUL9Q8IWT3 2517 aa12.9□□□□□ -0.34
TPM1-227ENST00000560970 A0A1W2PRG0 241 aa12.89□□□□□ -0.35
TPM1-227ENST00000560970 IGHA2P01877 340 aa12.89□□□□□ -0.35
TPM1-227ENST00000560970 B4GALNT3Q6L9W6 998 aa12.89□□□□□ -0.35
TPM1-227ENST00000560970 GPATCH3Q96I76 525 aa12.89□□□□□ -0.35
TPM1-227ENST00000560970 LBHD1Q9BQE6 289 aaPredicted RBP12.89□□□□□ -0.35
TPM1-227ENST00000560970 LNPKQ9C0E8 428 aa12.89□□□□□ -0.35
TPM1-227ENST00000560970 SENP6Q9GZR1 1112 aaPredicted RBP12.89□□□□□ -0.35
TPM1-227ENST00000560970 STXBP5LQ9Y2K9 1186 aa12.89□□□□□ -0.35
TPM1-227ENST00000560970 CDH23Q9H251 3354 aa12.89□□□□□ -0.35
TPM1-227ENST00000560970 TTC41PQ6P2S7 1318 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 KBTBD13C9JR72 458 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 WDR46O15213 610 aaKnown RBP12.88□□□□□ -0.35
TPM1-227ENST00000560970 STRNO43815 780 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 FLOT1O75955 427 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 MBD4O95243 580 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 CYP2D6P10635 497 aa12.88□□□□□ -0.35
TPM1-227ENST00000560970 ERCC3P19447 782 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms