RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 CDK8P49336 464 aa10.86□□□□□ -0.67
IDH3A-217ENST00000559889 LBX2Q6XYB7 198 aa10.86□□□□□ -0.67
IDH3A-217ENST00000559889 CLEC10AQ8IUN9 316 aa10.86□□□□□ -0.67
IDH3A-217ENST00000559889 SPRYD3Q8NCJ5 442 aa10.86□□□□□ -0.67
IDH3A-217ENST00000559889 U2AF1L4Q8WU68 220 aaKnown RBP10.86□□□□□ -0.67
IDH3A-217ENST00000559889 GTF3C2Q8WUA4 911 aaPredicted RBP10.86□□□□□ -0.67
IDH3A-217ENST00000559889 SLKQ9H2G2 1235 aaPredicted RBP10.86□□□□□ -0.67
IDH3A-217ENST00000559889 PAK6Q9NQU5 681 aaPredicted RBP10.86□□□□□ -0.67
IDH3A-217ENST00000559889 PLXNB2O15031 1838 aa10.86□□□□□ -0.67
IDH3A-217ENST00000559889 MYH7P12883 1935 aa10.86□□□□□ -0.67
IDH3A-217ENST00000559889 RNF113AO15541 343 aaKnown RBP10.85□□□□□ -0.67
IDH3A-217ENST00000559889 NKX2-3Q8TAU0 364 aa10.85□□□□□ -0.67
IDH3A-217ENST00000559889 APPBP2Q92624 585 aa10.85□□□□□ -0.67
IDH3A-217ENST00000559889 USP6NLQ92738 828 aa10.85□□□□□ -0.67
IDH3A-217ENST00000559889 PAGR1Q9BTK6 254 aa10.85□□□□□ -0.67
IDH3A-217ENST00000559889 RPAP3Q9H6T3 665 aaPredicted RBP10.85□□□□□ -0.67
IDH3A-217ENST00000559889 RABGAP1Q9Y3P9 1069 aa10.85□□□□□ -0.67
IDH3A-217ENST00000559889 BAZ2AQ9UIF9 1905 aaKnown RBP10.85□□□□□ -0.67
IDH3A-217ENST00000559889 SPDYE16A6NNV3 312 aaPredicted RBP10.85□□□□□ -0.67
IDH3A-217ENST00000559889 SGPL1O95470 568 aa10.85□□□□□ -0.67
IDH3A-217ENST00000559889 MAPK4P31152 587 aa10.85□□□□□ -0.67
IDH3A-217ENST00000559889 TRIM32Q13049 653 aa10.85□□□□□ -0.67
IDH3A-217ENST00000559889 BTBD7Q9P203 1132 aa10.85□□□□□ -0.67
IDH3A-217ENST00000559889 SDSP20132 328 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 SBK1Q52WX2 424 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 MORN1Q5T089 497 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 GPR142Q7Z601 462 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 TRIB2Q92519 343 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 CCDC17Q96LX7 622 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.84□□□□□ -0.67
IDH3A-217ENST00000559889 EPB41L4AQ9HCS5 686 aaPredicted RBP10.84□□□□□ -0.67
IDH3A-217ENST00000559889 TMX2Q9Y320 296 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 M0R2C6 588 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 GPAA1O43292 621 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 GLRX3O76003 335 aaKnown RBP10.84□□□□□ -0.67
IDH3A-217ENST00000559889 HMGCRP04035 888 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 ZFYP08048 801 aaPredicted RBP10.84□□□□□ -0.67
IDH3A-217ENST00000559889 XRCC5P13010 732 aaKnown RBP10.84□□□□□ -0.67
IDH3A-217ENST00000559889 MX1P20591 662 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 GIMAP6Q6P9H5 292 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 CRISPLD2Q9H0B8 497 aa10.84□□□□□ -0.67
IDH3A-217ENST00000559889 ARPP21Q9UBL0 812 aaPredicted RBP10.84□□□□□ -0.67
IDH3A-217ENST00000559889 CYP2B6P20813 491 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 PDE1AP54750 535 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 ICA1Q05084 483 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 AMOTL1Q8IY63 956 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 SOCS4Q8WXH5 440 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 DEFB118Q96PH6 123 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 SEC62Q99442 399 aaKnown RBP10.83□□□□□ -0.68
IDH3A-217ENST00000559889 NUDT12Q9BQG2 462 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 DNAH12Q6ZR08 3092 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 ERC2O15083 957 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 SLC34A2O95436 690 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 MAP3K21Q5TCX8 1036 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 CASC1Q6TDU7 716 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 PLEKHH3Q7Z736 793 aa10.83□□□□□ -0.68
IDH3A-217ENST00000559889 ROBO3Q96MS0 1386 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 EEF2P13639 858 aaKnown RBP10.82□□□□□ -0.68
IDH3A-217ENST00000559889 COG2Q14746 738 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 SPICE1Q8N0Z3 855 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 LPAR1Q92633 364 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.82□□□□□ -0.68
IDH3A-217ENST00000559889 VCPKMTQ9H867 229 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 RLFQ13129 1914 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 RASA1P20936 1047 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 RBM25P49756 843 aaKnown RBP10.82□□□□□ -0.68
IDH3A-217ENST00000559889 CCL14Q16627 93 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 KANSL2Q9H9L4 492 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 ARHGEF10LQ9HCE6 1279 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 HOXC10Q9NYD6 342 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 STAP2Q9UGK3 403 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 RPTORQ8N122 1335 aa10.82□□□□□ -0.68
IDH3A-217ENST00000559889 TRIM6-TRIM34B2RNG4 842 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 FOXP2O15409 715 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 GNAT2P19087 354 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 CCNA1P78396 465 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 ZMYM1Q5SVZ6 1142 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 RILPL2Q969X0 211 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 TANGO6Q9C0B7 1094 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 MINDY4BA8MYZ0 360 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 PATL2C9JE40 543 aaKnown RBP10.81□□□□□ -0.68
IDH3A-217ENST00000559889 FARP2O94887 1054 aaPredicted RBP10.81□□□□□ -0.68
IDH3A-217ENST00000559889 TFRCP02786 760 aaKnown RBP10.81□□□□□ -0.68
IDH3A-217ENST00000559889 PTPREP23469 700 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 RGS2P41220 211 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 HSCBQ8IWL3 235 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
IDH3A-217ENST00000559889 STK11IPQ8N1F8 1099 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 FSD1Q9BTV5 496 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 SH2D4AQ9H788 454 aa10.81□□□□□ -0.68
IDH3A-217ENST00000559889 SZT2Q5T011 3432 aa10.8□□□□□ -0.68
IDH3A-217ENST00000559889 CEP290O15078 2479 aa10.8□□□□□ -0.68
IDH3A-217ENST00000559889 LAMA3Q16787 3333 aa10.8□□□□□ -0.68
IDH3A-217ENST00000559889 IGHA2P01877 340 aa10.8□□□□□ -0.68
IDH3A-217ENST00000559889 PRKAR2AP13861 404 aaKnown RBP10.8□□□□□ -0.68
IDH3A-217ENST00000559889 DSG3P32926 999 aa10.8□□□□□ -0.68
IDH3A-217ENST00000559889 MNX1P50219 401 aaPredicted RBP10.8□□□□□ -0.68
IDH3A-217ENST00000559889 MAP2K5Q13163 448 aa10.8□□□□□ -0.68
IDH3A-217ENST00000559889 GRB14Q14449 540 aa10.8□□□□□ -0.68
IDH3A-217ENST00000559889 NFKBIBQ15653 356 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms