RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 TMEM110-MUSTN1A8MSY1 372 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 TADA3O75528 432 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 KRT13P13646 458 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 COPB1P53618 953 aaKnown RBP7.94□□□□□ -1.14
USP3-210ENST00000559192 SPATA5Q8NB90 893 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 SPAG5Q96R06 1193 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 IFIH1Q9BYX4 1025 aaKnown RBP7.94□□□□□ -1.14
USP3-210ENST00000559192 PPANQ9NQ55 473 aaKnown RBP7.94□□□□□ -1.14
USP3-210ENST00000559192 ANKIB1Q9P2G1 1089 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 TLDC2A0PJX2 215 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 SRGAP2O75044 1071 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 IGKV5-2P06315 115 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 ZNF654Q8IZM8 581 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 CTNNBL1Q8WYA6 563 aaPredicted RBP7.94□□□□□ -1.14
USP3-210ENST00000559192 SIRT1Q96EB6 747 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 SELENOOQ9BVL4 669 aa7.94□□□□□ -1.14
USP3-210ENST00000559192 IRX2Q9BZI1 471 aaPredicted RBP7.94□□□□□ -1.14
USP3-210ENST00000559192 FEZ2Q9UHY8 353 aaPredicted RBP7.94□□□□□ -1.14
USP3-210ENST00000559192 SALL3Q9BXA9 1300 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 ST3GAL1Q11201 340 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 CCDC152Q4G0S7 254 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 AKNAD1Q5T1N1 836 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 C2CD5Q86YS7 1000 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 IFT20Q8IY31 132 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 TRIML1Q8N9V2 468 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 UIMC1Q96RL1 719 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 EPN1Q9Y6I3 576 aaPredicted RBP7.93□□□□□ -1.14
USP3-210ENST00000559192 CCNT1O60563 726 aaKnown RBP7.93□□□□□ -1.14
USP3-210ENST00000559192 RFC1P35251 1148 aaPredicted RBP7.93□□□□□ -1.14
USP3-210ENST00000559192 PPFIA1Q13136 1202 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 IFNL3Q8IZI9 196 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 OR8K1Q8NGG5 319 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 DDX17Q92841 729 aaKnown RBP7.93□□□□□ -1.14
USP3-210ENST00000559192 USP42Q9H9J4 1324 aaKnown RBP7.93□□□□□ -1.14
USP3-210ENST00000559192 FMNL1O95466 1100 aaPredicted RBP7.93□□□□□ -1.14
USP3-210ENST00000559192 TNNC1P63316 161 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 PUM3Q15397 648 aaKnown RBP7.93□□□□□ -1.14
USP3-210ENST00000559192 FMNL3Q8IVF7 1028 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 FERMT2Q96AC1 680 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 B4DLN1 442 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 SH2B2O14492 632 aaPredicted RBP7.93□□□□□ -1.14
USP3-210ENST00000559192 RAPGEF1Q13905 1077 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 EPSTI1Q96J88 318 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 NOX5Q96PH1 765 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 TRIM31Q9BZY9 425 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 ALDH8A1Q9H2A2 487 aaPredicted RBP7.93□□□□□ -1.14
USP3-210ENST00000559192 LMTK2Q8IWU2 1503 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 ZNF609O15014 1411 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 NEO1Q92859 1461 aa7.93□□□□□ -1.14
USP3-210ENST00000559192 GOLGA8KD6RF30 607 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 PPP1R12BO60237 982 aaPredicted RBP7.92□□□□□ -1.14
USP3-210ENST00000559192 CALML3P27482 149 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 FAM47AQ5JRC9 791 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 DYMQ7RTS9 669 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 RPAINQ86UA6 219 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 FHOD1Q9Y613 1164 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 RPN1P04843 607 aaKnown RBP7.92□□□□□ -1.14
USP3-210ENST00000559192 PHKG2P15735 406 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 PDE6AP16499 860 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 PPARAQ07869 468 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 IFI16Q16666 785 aaKnown RBP7.92□□□□□ -1.14
USP3-210ENST00000559192 KIAA0753Q2KHM9 967 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 SHC4Q6S5L8 630 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 RRAGAQ7L523 313 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 DZIP3Q86Y13 1208 aaKnown RBP7.92□□□□□ -1.14
USP3-210ENST00000559192 SDR42E1Q8WUS8 393 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 PANX2Q96RD6 677 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 TEX13AQ9BXU3 409 aaPredicted RBP7.92□□□□□ -1.14
USP3-210ENST00000559192 MCM9Q9NXL9 1143 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 ARAP3Q8WWN8 1544 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 MROH7-TTC4A0A0A0MT08 1334 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 TEX33O43247 280 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 MFAP3LO75121 409 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 MMP1P03956 469 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 CXCR5P32302 372 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 GCKP35557 465 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 PLA2G4AP47712 749 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 ANKS4BQ8N8V4 417 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 ENOX1Q8TC92 643 aaKnown RBP7.92□□□□□ -1.14
USP3-210ENST00000559192 ZNF622Q969S3 477 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP3-210ENST00000559192 JRKLQ9Y4A0 524 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 CTDP1Q9Y5B0 961 aaPredicted RBP7.92□□□□□ -1.14
USP3-210ENST00000559192 GSTTP1A0A1W2PQM5 241 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 EIF3CLB5ME19 914 aaKnown RBP7.92□□□□□ -1.14
USP3-210ENST00000559192 CTDNEP1O95476 244 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 SLC7A5Q01650 507 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 ANKRD13CQ8N6S4 541 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 FANCBQ8NB91 859 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 EIF3CQ99613 913 aaKnown RBP7.92□□□□□ -1.14
USP3-210ENST00000559192 TBC1D7Q9P0N9 293 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 CD163L1Q9NR16 1453 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 ARHGEF28Q8N1W1 1705 aaKnown RBP7.92□□□□□ -1.14
USP3-210ENST00000559192 PPLO60437 1756 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 MAGEA1P43355 309 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 CYB5R4Q7L1T6 521 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 EFCAB13Q8IY85 973 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 NUP58Q9BVL2 599 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 FAM114A2Q9NRY5 505 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 TBX22Q9Y458 520 aa7.92□□□□□ -1.14
USP3-210ENST00000559192 PIK3C2BO00750 1634 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms