RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 AFMP43652 599 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 SCNN1DP51172 638 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
TPM1-210ENST00000558264 TYW1BQ6NUM6 668 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.09□□□□□ -0.47
TPM1-210ENST00000558264 CLEC10AQ8IUN9 316 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 STAMQ92783 540 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 BRMS1Q9HCU9 246 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 TUBE1Q9UJT0 475 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 SRPRBQ9Y5M8 271 aaKnown RBP12.09□□□□□ -0.47
TPM1-210ENST00000558264 VWA3AA6NCI4 1184 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 CDK8P49336 464 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 EIF6P56537 245 aaKnown RBP12.09□□□□□ -0.47
TPM1-210ENST00000558264 PPP4CP60510 307 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 TTC38Q5R3I4 469 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 PPP4R3CPQ6ZMV5 832 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 MRFAP1L1Q96HT8 127 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 TMEM47Q9BQJ4 181 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 FAM205AQ6ZU69 1335 aa12.09□□□□□ -0.47
TPM1-210ENST00000558264 FAM237AA0A1B0GTK4 181 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 TPM3P06753 285 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 HOXA10P31260 410 aaPredicted RBP12.08□□□□□ -0.48
TPM1-210ENST00000558264 RHBDL3P58872 404 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 POSTNQ15063 836 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 PFKFB3Q16875 520 aaPredicted RBP12.08□□□□□ -0.48
TPM1-210ENST00000558264 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
TPM1-210ENST00000558264 HEATR3Q7Z4Q2 680 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 HOMER1Q86YM7 354 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 TRMT44Q8IYL2 757 aaKnown RBP12.08□□□□□ -0.48
TPM1-210ENST00000558264 TSC1Q92574 1164 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
TPM1-210ENST00000558264 TNFRSF25Q93038 417 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 EYA3Q99504 573 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 MAD2L2Q9UI95 211 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 CEP131Q9UPN4 1083 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 GPR75-ASB3A0A0A6YYF3 556 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 CYTH3O43739 400 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 MMP10P09238 476 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 CDC25AP30304 524 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 KIF5BP33176 963 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 PTGDRQ13258 359 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 CERS5Q8N5B7 392 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 HSD3B7Q9H2F3 369 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 KCNQ5Q9NR82 932 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 DAGLAQ9Y4D2 1042 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 DLEC1Q9Y238 1755 aa12.08□□□□□ -0.48
TPM1-210ENST00000558264 RBM10P98175 930 aaKnown RBP12.07□□□□□ -0.48
TPM1-210ENST00000558264 MDM2Q00987 491 aaPredicted RBP12.07□□□□□ -0.48
TPM1-210ENST00000558264 USP17L2Q6R6M4 530 aa12.07□□□□□ -0.48
TPM1-210ENST00000558264 TMC6Q7Z403 805 aa12.07□□□□□ -0.48
TPM1-210ENST00000558264 DGKHQ86XP1 1220 aa12.07□□□□□ -0.48
TPM1-210ENST00000558264 DPF2Q92785 391 aa12.07□□□□□ -0.48
TPM1-210ENST00000558264 C16orf45Q96MC5 204 aaPredicted RBP12.07□□□□□ -0.48
TPM1-210ENST00000558264 CRAMP1Q96RY5 1269 aa12.07□□□□□ -0.48
TPM1-210ENST00000558264 SPTLC3Q9NUV7 552 aa12.07□□□□□ -0.48
TPM1-210ENST00000558264 PODXL2Q9NZ53 605 aa12.07□□□□□ -0.48
TPM1-210ENST00000558264 MAN1B1Q9UKM7 699 aa12.07□□□□□ -0.48
TPM1-210ENST00000558264 ACTN4O43707 911 aaKnown RBP12.07□□□□□ -0.48
TPM1-210ENST00000558264 CDC25BP30305 580 aa12.07□□□□□ -0.48
TPM1-210ENST00000558264 LRRC8AQ8IWT6 810 aa12.07□□□□□ -0.48
TPM1-210ENST00000558264 ZNF622Q969S3 477 aaKnown RBP eCLIP12.07□□□□□ -0.487e-8■■□□□ 14.3
TPM1-210ENST00000558264 NAV1Q8NEY1 1877 aa12.07□□□□□ -0.48
TPM1-210ENST00000558264 SNED1Q8TER0 1413 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 SRGNP10124 158 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 WWC2Q6AWC2 1192 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 CEP95Q96GE4 821 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 ZC3H12CQ9C0D7 883 aaKnown RBP12.06□□□□□ -0.48
TPM1-210ENST00000558264 FANCLQ9NW38 375 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 ROBO3Q96MS0 1386 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 USP27XA6NNY8 438 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 FANCCQ00597 558 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 FMR1Q06787 632 aaKnown RBP eCLIP12.06□□□□□ -0.48
TPM1-210ENST00000558264 GRM4Q14833 912 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 BPIFA3Q9BQP9 254 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 DBNDD1Q9H9R9 158 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 DDX4Q9NQI0 724 aaKnown RBP12.06□□□□□ -0.48
TPM1-210ENST00000558264 TTF2Q9UNY4 1162 aaKnown RBP12.06□□□□□ -0.48
TPM1-210ENST00000558264 ATP6V0A2Q9Y487 856 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 PCDHAC2Q9Y5I4 1007 aa12.06□□□□□ -0.48
TPM1-210ENST00000558264 G3V3G9 751 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 COBLO75128 1261 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 MYL5Q02045 173 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 GOLGA8FQ08AF8 430 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 GOLGA8DPQ0D2H9 430 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 IL17AQ16552 155 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 DCAF8Q5TAQ9 597 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 DPP8Q6V1X1 898 aaPredicted RBP12.05□□□□□ -0.48
TPM1-210ENST00000558264 C16orf86Q6ZW13 317 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 SP8Q8IXZ3 490 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 SMYD4Q8IYR2 804 aaPredicted RBP12.05□□□□□ -0.48
TPM1-210ENST00000558264 SMARCE1Q969G3 411 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 UBA5Q9GZZ9 404 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 FRMPD2Q68DX3 1309 aaPredicted RBP12.05□□□□□ -0.48
TPM1-210ENST00000558264 SMTNL1A8MU46 457 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 KLRF2D3W0D1 207 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 SERPINC1P01008 464 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 SKILP12757 684 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 CACNB3P54284 484 aa12.05□□□□□ -0.48
TPM1-210ENST00000558264 TPM4P67936 248 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms