RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 C12orf42Q96LP6 360 aa14.87□□□□□ -0.03
SLIRP-211ENST00000557623 MCOLN1Q9GZU1 580 aa14.87□□□□□ -0.03
SLIRP-211ENST00000557623 SH2D4AQ9H788 454 aa14.87□□□□□ -0.03
SLIRP-211ENST00000557623 ARHGEF10LQ9HCE6 1279 aa14.87□□□□□ -0.03
SLIRP-211ENST00000557623 CPA4Q9UI42 421 aa14.87□□□□□ -0.03
SLIRP-211ENST00000557623 ZMYM6O95789 1325 aa14.87□□□□□ -0.03
SLIRP-211ENST00000557623 LAMA4Q16363 1823 aa14.87□□□□□ -0.03
SLIRP-211ENST00000557623 STK25O00506 426 aa14.86□□□□□ -0.03
SLIRP-211ENST00000557623 SEC24BO95487 1268 aa14.86□□□□□ -0.03
SLIRP-211ENST00000557623 HSPD1P10809 573 aaKnown RBP14.86□□□□□ -0.03
SLIRP-211ENST00000557623 RASA1P20936 1047 aa14.86□□□□□ -0.03
SLIRP-211ENST00000557623 GCLCP48506 637 aaPredicted RBP14.86□□□□□ -0.03
SLIRP-211ENST00000557623 IRX3P78415 501 aaPredicted RBP14.86□□□□□ -0.03
SLIRP-211ENST00000557623 ICA1Q05084 483 aa14.86□□□□□ -0.03
SLIRP-211ENST00000557623 VPS53Q5VIR6 699 aa14.86□□□□□ -0.03
SLIRP-211ENST00000557623 ZNF589Q86UQ0 364 aaPredicted RBP14.86□□□□□ -0.03
SLIRP-211ENST00000557623 STK11IPQ8N1F8 1099 aa14.86□□□□□ -0.03
SLIRP-211ENST00000557623 CD99L2Q8TCZ2 262 aa14.86□□□□□ -0.03
SLIRP-211ENST00000557623 RUFY2Q8WXA3 655 aa14.86□□□□□ -0.03
SLIRP-211ENST00000557623 KANSL2Q9H9L4 492 aa14.86□□□□□ -0.03
SLIRP-211ENST00000557623 EMILIN3Q9NT22 766 aa14.86□□□□□ -0.03
SLIRP-211ENST00000557623 FOXP2O15409 715 aa14.85□□□□□ -0.03
SLIRP-211ENST00000557623 BCRP11274 1271 aa14.85□□□□□ -0.03
SLIRP-211ENST00000557623 LACTBP83111 547 aaPredicted RBP14.85□□□□□ -0.03
SLIRP-211ENST00000557623 ZYXQ15942 572 aaKnown RBP14.85□□□□□ -0.03
SLIRP-211ENST00000557623 ERICH6BQ5W0A0 696 aa14.85□□□□□ -0.03
SLIRP-211ENST00000557623 ACER1Q8TDN7 264 aa14.85□□□□□ -0.03
SLIRP-211ENST00000557623 ASCC2Q9H1I8 757 aaPredicted RBP14.85□□□□□ -0.03
SLIRP-211ENST00000557623 EFCC1Q9HA90 598 aa14.85□□□□□ -0.03
SLIRP-211ENST00000557623 ANAPC4Q9UJX5 808 aa14.85□□□□□ -0.03
SLIRP-211ENST00000557623 TRIM17Q9Y577 477 aa14.85□□□□□ -0.03
SLIRP-211ENST00000557623 USP17L15C9J2P7 530 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 USP17L13C9JLJ4 530 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 USP17L11C9JVI0 530 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 USP17L18D6R9N7 530 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 USP17L22D6RA61 530 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 USP17L17D6RBQ6 530 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 USP17L19D6RCP7 530 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 USP17L20D6RJB6 530 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 GNRH1P01148 92 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 FGAP02671 866 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 USP17L24Q0WX57 530 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 GTF3C2Q8WUA4 911 aaPredicted RBP14.84□□□□□ -0.03
SLIRP-211ENST00000557623 LPAR1Q92633 364 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 TMX2Q9Y320 296 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 ZSWIM8A7E2V4 1837 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 RAD50Q92878 1312 aa14.84□□□□□ -0.03
SLIRP-211ENST00000557623 A0A1W2PRG0 241 aa14.83□□□□□ -0.04
SLIRP-211ENST00000557623 TSPY3P0CV98 308 aa14.83□□□□□ -0.04
SLIRP-211ENST00000557623 TSPY8P0CW00 308 aa14.83□□□□□ -0.04
SLIRP-211ENST00000557623 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
SLIRP-211ENST00000557623 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
SLIRP-211ENST00000557623 FBXO46Q6PJ61 603 aaPredicted RBP14.83□□□□□ -0.04
SLIRP-211ENST00000557623 OTOP1Q7RTM1 612 aa14.83□□□□□ -0.04
SLIRP-211ENST00000557623 ABHD8Q96I13 439 aa14.83□□□□□ -0.04
SLIRP-211ENST00000557623 STK24Q9Y6E0 443 aa14.83□□□□□ -0.04
SLIRP-211ENST00000557623 PARP14Q460N5 1801 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 PRDM1O75626 825 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 PCP11498 1178 aaKnown RBP14.82□□□□□ -0.04
SLIRP-211ENST00000557623 VCAM1P19320 739 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 HOXD10P28358 340 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 ATP2B2Q01814 1243 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 CTDSPL2Q05D32 466 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 FAM110CQ1W6H9 321 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 CATSPERGQ6ZRH7 1159 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 SIAH1Q8IUQ4 282 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 DSCC1Q9BVC3 393 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.82□□□□□ -0.042e-6■□□□□ 10.5
SLIRP-211ENST00000557623 VCPKMTQ9H867 229 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 GOPCQ9HD26 462 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 NYAP2Q9P242 653 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.82□□□□□ -0.04
SLIRP-211ENST00000557623 PLIN4Q96Q06 1357 aa14.82□□□□□ -0.04
SLIRP-211ENST00000557623 ORC4O43929 436 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 CHMLP26374 656 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 PSMC4P43686 418 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 PRMT2P55345 433 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 FCGRTP55899 365 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 HERVK_113P62684 666 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 TFAP4Q01664 338 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 IFFO2Q5TF58 517 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 CLEC10AQ8IUN9 316 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 ANKRD13CQ8N6S4 541 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 NEDD1Q8NHV4 660 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 P2RX7Q99572 595 aaKnown RBP14.81□□□□□ -0.04
SLIRP-211ENST00000557623 RPAP3Q9H6T3 665 aaPredicted RBP14.81□□□□□ -0.04
SLIRP-211ENST00000557623 CTNNA3Q9UI47 895 aa14.81□□□□□ -0.04
SLIRP-211ENST00000557623 IGKV6D-41A0A0C4DH26 115 aa14.8□□□□□ -0.04
SLIRP-211ENST00000557623 TSPY2A6NKD2 308 aa14.8□□□□□ -0.04
SLIRP-211ENST00000557623 ZNF213O14771 459 aa14.8□□□□□ -0.04
SLIRP-211ENST00000557623 WDR46O15213 610 aaKnown RBP14.8□□□□□ -0.04
SLIRP-211ENST00000557623 FMNL1O95466 1100 aaPredicted RBP14.8□□□□□ -0.04
SLIRP-211ENST00000557623 FGRP09769 529 aa14.8□□□□□ -0.04
SLIRP-211ENST00000557623 ARHGAP39Q9C0H5 1083 aa14.8□□□□□ -0.04
SLIRP-211ENST00000557623 RNF41Q9H4P4 317 aaPredicted RBP14.8□□□□□ -0.04
SLIRP-211ENST00000557623 PPP4R2Q9NY27 417 aa14.8□□□□□ -0.04
SLIRP-211ENST00000557623 MORF4L1Q9UBU8 362 aa14.8□□□□□ -0.04
SLIRP-211ENST00000557623 SYNPO2Q9UMS6 1093 aa14.8□□□□□ -0.04
SLIRP-211ENST00000557623 PTPN22Q9Y2R2 807 aa14.8□□□□□ -0.04
SLIRP-211ENST00000557623 RLFQ13129 1914 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms