RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 AFG3L2Q9Y4W6 797 aa14.65□□□□□ -0.06
ABCD4-223ENST00000555904 GREB1LQ9C091 1923 aaPredicted RBP14.64□□□□□ -0.07
ABCD4-223ENST00000555904 CXCL11O14625 94 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 IRF6O14896 467 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 CALM1P0DP23 149 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 CALM2P0DP24 149 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 CALM3P0DP25 149 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 NOVP48745 357 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 GTF2A2P52657 109 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 BACE1P56817 501 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 COL9A3Q14050 684 aaPredicted RBP14.64□□□□□ -0.07
ABCD4-223ENST00000555904 RCSD1Q6JBY9 416 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 SGMS1Q86VZ5 419 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 GMCL1P1Q8NEA9 526 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 ACER1Q8TDN7 264 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 CNKSR2Q8WXI2 1034 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 LPAR1Q92633 364 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 ALDH8A1Q9H2A2 487 aaPredicted RBP14.64□□□□□ -0.07
ABCD4-223ENST00000555904 MTMR7Q9Y216 660 aa14.64□□□□□ -0.07
ABCD4-223ENST00000555904 KLF18A0A0U1RQI7 1052 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 GOLGA8BA8MQT2 603 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 DDAH1O94760 285 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 MCM2P49736 904 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 AK2P54819 239 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 GRM1Q13255 1194 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 SPRYD7Q5W111 196 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 USP17L2Q6R6M4 530 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 NOL8Q76FK4 1167 aaKnown RBP14.63□□□□□ -0.07
ABCD4-223ENST00000555904 RASAL3Q86YV0 1011 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 ZNF654Q8IZM8 581 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 AGXT2Q9BYV1 514 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 VCPKMTQ9H867 229 aa14.63□□□□□ -0.07
ABCD4-223ENST00000555904 GPHNQ9NQX3 736 aaPredicted RBP14.63□□□□□ -0.07
ABCD4-223ENST00000555904 A0A0G2JLL6 359 aaPredicted RBP14.62□□□□□ -0.07
ABCD4-223ENST00000555904 A0A1W2PRG0 241 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 RASSF10A6NK89 507 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 F5H6K3 240 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 ZBTB43O43298 467 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 SLC10A3P09131 477 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 CETPP11597 493 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 KIF5BP33176 963 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 SLC1A4P43007 532 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 HMGCS2P54868 508 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 C1QTNF8P60827 252 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 KLRC3Q07444 240 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 APOBRQ0VD83 1088 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 MKRN3Q13064 507 aaKnown RBP14.62□□□□□ -0.07
ABCD4-223ENST00000555904 TOB2Q14106 344 aaPredicted RBP14.62□□□□□ -0.07
ABCD4-223ENST00000555904 CCDC96Q2M329 555 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 DEFB115Q30KQ5 88 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 SLFN13Q68D06 897 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 APOA5Q6Q788 366 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 FASTKD5Q7L8L6 764 aaKnown RBP14.62□□□□□ -0.07
ABCD4-223ENST00000555904 PRRT2Q7Z6L0 340 aaPredicted RBP14.62□□□□□ -0.07
ABCD4-223ENST00000555904 MICU3Q86XE3 530 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 SIAH1Q8IUQ4 282 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 SPICE1Q8N0Z3 855 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 CTCFLQ8NI51 663 aaPredicted RBP14.62□□□□□ -0.07
ABCD4-223ENST00000555904 NUP133Q8WUM0 1156 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 KCNH4Q9UQ05 1017 aa14.62□□□□□ -0.07
ABCD4-223ENST00000555904 MANSC4A6NHS7 340 aaPredicted RBP14.61□□□□□ -0.07
ABCD4-223ENST00000555904 NDUFB10O96000 172 aa14.61□□□□□ -0.07
ABCD4-223ENST00000555904 RCAN1P53805 252 aa14.61□□□□□ -0.07
ABCD4-223ENST00000555904 GADL1Q6ZQY3 521 aa14.61□□□□□ -0.07
ABCD4-223ENST00000555904 PROCA1Q8NCQ7 364 aaPredicted RBP14.61□□□□□ -0.07
ABCD4-223ENST00000555904 DCAF4Q8WV16 495 aa14.61□□□□□ -0.07
ABCD4-223ENST00000555904 GMCL1Q96IK5 515 aa14.61□□□□□ -0.07
ABCD4-223ENST00000555904 LIMCH1Q9UPQ0 1083 aa14.61□□□□□ -0.07
ABCD4-223ENST00000555904 CCDC196A0A1B0GTZ2 297 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 GOLGA8AA7E2F4 631 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 WDR46O15213 610 aaKnown RBP14.6□□□□□ -0.07
ABCD4-223ENST00000555904 DHX16O60231 1041 aaKnown RBP14.6□□□□□ -0.07
ABCD4-223ENST00000555904 PARP1P09874 1014 aaKnown RBP14.6□□□□□ -0.07
ABCD4-223ENST00000555904 PDHBP11177 359 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 VCAM1P19320 739 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 METAP2P50579 478 aaKnown RBP eCLIP14.6□□□□□ -0.07
ABCD4-223ENST00000555904 SREBF2Q12772 1141 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 IKQ13123 557 aaPredicted RBP14.6□□□□□ -0.07
ABCD4-223ENST00000555904 NOGQ13253 232 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 PABPC4Q13310 644 aaKnown RBP eCLIP14.6□□□□□ -0.07
ABCD4-223ENST00000555904 ASPRV1Q53RT3 343 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 SH3D19Q5HYK7 790 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 GPATCH4Q5T3I0 446 aaKnown RBP14.6□□□□□ -0.07
ABCD4-223ENST00000555904 CHMP4CQ96CF2 233 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 ZNF274Q96GC6 653 aaPredicted RBP14.6□□□□□ -0.07
ABCD4-223ENST00000555904 C12orf42Q96LP6 360 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 MAP3K14Q99558 947 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 MYL10Q9BUA6 226 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 TANGO6Q9C0B7 1094 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 SENP2Q9HC62 589 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 BRPF3Q9ULD4 1205 aa14.6□□□□□ -0.07
ABCD4-223ENST00000555904 CCL15-CCL14A0A0B4J2E2 113 aa14.59□□□□□ -0.07
ABCD4-223ENST00000555904 BMP3P12645 472 aa14.59□□□□□ -0.07
ABCD4-223ENST00000555904 HSPA6P17066 643 aa14.59□□□□□ -0.07
ABCD4-223ENST00000555904 GJA5P36382 358 aa14.59□□□□□ -0.07
ABCD4-223ENST00000555904 EVCP57679 992 aa14.59□□□□□ -0.07
ABCD4-223ENST00000555904 INHBEP58166 350 aa14.59□□□□□ -0.07
ABCD4-223ENST00000555904 TROAPQ12815 778 aa14.59□□□□□ -0.07
ABCD4-223ENST00000555904 PPP2R5BQ15173 497 aa14.59□□□□□ -0.07
ABCD4-223ENST00000555904 CCL15Q16663 113 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms