RNA–Protein interactions for RNA: ENST00000554969.5

HNRNPC-214, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 5 BASIC

Gene HNRNPC, Length 1,924 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-214ENST00000554969 SLC3A2P08195 630 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-214ENST00000554969 MAP4K1Q92918 833 aa12.85□□□□□ -0.35
HNRNPC-214ENST00000554969 CHMP4CQ96CF2 233 aa12.85□□□□□ -0.35
HNRNPC-214ENST00000554969 PARK7Q99497 189 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-214ENST00000554969 RPAP3Q9H6T3 665 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-214ENST00000554969 TOMM22Q9NS69 142 aa12.85□□□□□ -0.35
HNRNPC-214ENST00000554969 CLIP2Q9UDT6 1046 aa12.85□□□□□ -0.35
HNRNPC-214ENST00000554969 A0A0G2JMZ2 1700 aa12.85□□□□□ -0.35
HNRNPC-214ENST00000554969 TSPY2A6NKD2 308 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 USP14P54578 494 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 SP3Q02447 781 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 STOX1Q6ZVD7 989 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 LRRC47Q8N1G4 583 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 ANKRD13CQ8N6S4 541 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 NUP88Q99567 741 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 VCPKMTQ9H867 229 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 NYAP2Q9P242 653 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 CDC45O75419 566 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 CATSPERGQ6ZRH7 1159 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 SMCR8Q8TEV9 937 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 ZKSCAN3Q9BRR0 538 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 ARHGEF10LQ9HCE6 1279 aa12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 RBM8AQ9Y5S9 174 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-214ENST00000554969 B4E1Z4 1266 aa12.83□□□□□ -0.36
HNRNPC-214ENST00000554969 NOVP48745 357 aa12.83□□□□□ -0.36
HNRNPC-214ENST00000554969 HERVK_113P62684 666 aa12.83□□□□□ -0.36
HNRNPC-214ENST00000554969 LACTBP83111 547 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-214ENST00000554969 IMMTQ16891 758 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-214ENST00000554969 RCSD1Q6JBY9 416 aa12.83□□□□□ -0.36
HNRNPC-214ENST00000554969 ANO2Q9NQ90 1003 aa12.83□□□□□ -0.36
HNRNPC-214ENST00000554969 FBXO28Q9NVF7 368 aa12.83□□□□□ -0.36
HNRNPC-214ENST00000554969 RAD21O60216 631 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 KDM4AO75164 1064 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 CNMDO75829 334 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 TTLL1O95922 423 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 NDUFB10O96000 172 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 Q3C1V9 767 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 MKL1Q969V6 931 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 RBPJLQ9UBG7 517 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 STX8Q9UNK0 236 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 PLXNB2O15031 1838 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 SPDYE16A6NNV3 312 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 F5H6K3 240 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 IRX3P78415 501 aaPredicted RBP12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 KLRC3Q07444 240 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 OTOP1Q7RTM1 612 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 TRIM47Q96LD4 638 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 ZSWIM5Q9P217 1185 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 CTNNA3Q9UI47 895 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 PNMA3Q9UL41 463 aa12.82□□□□□ -0.36
HNRNPC-214ENST00000554969 USP17L15C9J2P7 530 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 USP17L13C9JLJ4 530 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 USP17L11C9JVI0 530 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 USP17L18D6R9N7 530 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 USP17L22D6RA61 530 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 USP17L17D6RBQ6 530 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 USP17L19D6RCP7 530 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 USP17L20D6RJB6 530 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 USP17L24Q0WX57 530 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 NECTIN1Q15223 517 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 CYB5R4Q7L1T6 521 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 LPAR1Q92633 364 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 TANGO6Q9C0B7 1094 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 MCOLN1Q9GZU1 580 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 BTBD7Q9P203 1132 aa12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-214ENST00000554969 E7EWF7 191 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 OSBPP22059 807 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 PABPC4Q13310 644 aaKnown RBP eCLIP12.8□□□□□ -0.369e-62■□□□□ 10
HNRNPC-214ENST00000554969 TMEM47Q9BQJ4 181 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 TRIM17Q9Y577 477 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 TNRC18O15417 2968 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 SMCHD1A6NHR9 2005 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 WDR46O15213 610 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 PSMC4P43686 418 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 FAM110CQ1W6H9 321 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 CHST3Q7LGC8 479 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 CTU1Q7Z7A3 348 aaKnown RBP12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 PAGR1Q9BTK6 254 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 PORCNQ9H237 461 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 RNF41Q9H4P4 317 aaPredicted RBP12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 SH2D4AQ9H788 454 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 SENP2Q9HC62 589 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 GOPCQ9HD26 462 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 TCP11L1Q9NUJ3 509 aa12.8□□□□□ -0.36
HNRNPC-214ENST00000554969 SLC27A2O14975 620 aa12.79□□□□□ -0.36
HNRNPC-214ENST00000554969 FLOT1O75955 427 aa12.79□□□□□ -0.36
HNRNPC-214ENST00000554969 PCP11498 1178 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-214ENST00000554969 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
HNRNPC-214ENST00000554969 RASEFQ8IZ41 740 aa12.79□□□□□ -0.36
HNRNPC-214ENST00000554969 TNS4Q8IZW8 715 aa12.79□□□□□ -0.36
HNRNPC-214ENST00000554969 ENAHQ8N8S7 591 aaPredicted RBP12.79□□□□□ -0.36
HNRNPC-214ENST00000554969 GMCL1P1Q8NEA9 526 aa12.79□□□□□ -0.36
HNRNPC-214ENST00000554969 ESR2Q92731 530 aa12.79□□□□□ -0.36
HNRNPC-214ENST00000554969 ATG4CQ96DT6 458 aa12.79□□□□□ -0.36
HNRNPC-214ENST00000554969 ERO1AQ96HE7 468 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms