RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 DAGLAQ9Y4D2 1042 aa18.82■□□□□ 0.6
PCNX1-209ENST00000554879 PLIN2Q99541 437 aa18.82■□□□□ 0.6
PCNX1-209ENST00000554879 SIPA1L3O60292 1781 aaPredicted RBP18.82■□□□□ 0.6
PCNX1-209ENST00000554879 ITGB4P16144 1822 aa18.82■□□□□ 0.6
PCNX1-209ENST00000554879 CRKP46108 304 aa18.82■□□□□ 0.6
PCNX1-209ENST00000554879 TNNI2P48788 182 aa18.82■□□□□ 0.6
PCNX1-209ENST00000554879 PODNQ7Z5L7 613 aa18.82■□□□□ 0.6
PCNX1-209ENST00000554879 RGS22Q8NE09 1264 aa18.82■□□□□ 0.6
PCNX1-209ENST00000554879 TDRD3Q9H7E2 651 aaKnown RBP18.82■□□□□ 0.6
PCNX1-209ENST00000554879 BAZ2BQ9UIF8 2168 aaKnown RBP18.82■□□□□ 0.6
PCNX1-209ENST00000554879 JAKMIP3Q5VZ66 844 aa18.82■□□□□ 0.6
PCNX1-209ENST00000554879 SGMS1Q86VZ5 419 aa18.82■□□□□ 0.6
PCNX1-209ENST00000554879 CCDC93Q567U6 631 aa18.81■□□□□ 0.6
PCNX1-209ENST00000554879 C12orf60Q5U649 245 aa18.81■□□□□ 0.6
PCNX1-209ENST00000554879 RASGRP4Q8TDF6 673 aa18.81■□□□□ 0.6
PCNX1-209ENST00000554879 PSDA5PKW4 1024 aaPredicted RBP18.81■□□□□ 0.6
PCNX1-209ENST00000554879 RGL2O15211 777 aa18.81■□□□□ 0.6
PCNX1-209ENST00000554879 ZNF76P36508 570 aa18.81■□□□□ 0.6
PCNX1-209ENST00000554879 UBA7P41226 1012 aa18.81■□□□□ 0.6
PCNX1-209ENST00000554879 EVX2Q03828 476 aa18.81■□□□□ 0.6
PCNX1-209ENST00000554879 LETM2Q2VYF4 491 aa18.81■□□□□ 0.6
PCNX1-209ENST00000554879 FAM200AQ8TCP9 573 aa18.81■□□□□ 0.6
PCNX1-209ENST00000554879 CLSTN2Q9H4D0 955 aa18.81■□□□□ 0.6
PCNX1-209ENST00000554879 DDAH1O94760 285 aa18.81■□□□□ 0.6
PCNX1-209ENST00000554879 SCG2P13521 617 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 SETQ01105 290 aaPredicted RBP18.8■□□□□ 0.6
PCNX1-209ENST00000554879 KRBA2Q6ZNG9 492 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 ZNF710Q8N1W2 664 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 ZHX3Q9H4I2 956 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 C6orf50Q9HD87 102 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 LAMB4A4D0S4 1761 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 GDF11O95390 407 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 SLC1A4P43007 532 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 ATRNO75882 1429 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 WDR19Q8NEZ3 1342 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 FOXP2O15409 715 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 ZNF202O95125 648 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 YEATS4O95619 227 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 LMAN1P49257 510 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 NEK11Q8NG66 645 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 NBPF3Q9H094 633 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 ABCA3Q99758 1704 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 CLEC10AQ8IUN9 316 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.8■□□□□ 0.6
PCNX1-209ENST00000554879 RNF26Q9BY78 433 aaPredicted RBP18.8■□□□□ 0.6
PCNX1-209ENST00000554879 TCEAL9Q9UHQ7 104 aa18.8■□□□□ 0.6
PCNX1-209ENST00000554879 TOGARAM1Q9Y4F4 1720 aa18.79■□□□□ 0.6
PCNX1-209ENST00000554879 CERKLQ49MI3 558 aaPredicted RBP18.79■□□□□ 0.6
PCNX1-209ENST00000554879 NAA30Q147X3 362 aaPredicted RBP18.79■□□□□ 0.6
PCNX1-209ENST00000554879 PGBD1Q96JS3 809 aa18.79■□□□□ 0.6
PCNX1-209ENST00000554879 TTC38Q5R3I4 469 aa18.79■□□□□ 0.6
PCNX1-209ENST00000554879 KIF28PB7ZC32 967 aa18.78■□□□□ 0.6
PCNX1-209ENST00000554879 NDUFA8P51970 172 aa18.78■□□□□ 0.6
PCNX1-209ENST00000554879 AOPEPQ8N6M6 819 aa18.78■□□□□ 0.6
PCNX1-209ENST00000554879 KCNH3Q9ULD8 1083 aa18.78■□□□□ 0.6
PCNX1-209ENST00000554879 POLR2DO15514 142 aaKnown RBP18.78■□□□□ 0.6
PCNX1-209ENST00000554879 ADALQ6DHV7 355 aa18.78■□□□□ 0.6
PCNX1-209ENST00000554879 CSRNP1Q96S65 589 aa18.78■□□□□ 0.6
PCNX1-209ENST00000554879 KCNQ5Q9NR82 932 aa18.78■□□□□ 0.6
PCNX1-209ENST00000554879 RCOR1Q9UKL0 485 aa18.78■□□□□ 0.6
PCNX1-209ENST00000554879 TPM3P06753 285 aa18.78■□□□□ 0.6
PCNX1-209ENST00000554879 R3HDM1Q15032 1099 aaKnown RBP18.78■□□□□ 0.6
PCNX1-209ENST00000554879 LINC00301Q8NCQ3 95 aa18.78■□□□□ 0.6
PCNX1-209ENST00000554879 RTEL1Q9NZ71 1219 aa18.78■□□□□ 0.6
PCNX1-209ENST00000554879 TOP1P11387 765 aaKnown RBP18.77■□□□□ 0.6
PCNX1-209ENST00000554879 STAMQ92783 540 aa18.77■□□□□ 0.6
PCNX1-209ENST00000554879 TMEM47Q9BQJ4 181 aa18.77■□□□□ 0.6
PCNX1-209ENST00000554879 MMP1P03956 469 aa18.77■□□□□ 0.6
PCNX1-209ENST00000554879 SLC16A2P36021 539 aa18.77■□□□□ 0.6
PCNX1-209ENST00000554879 OXER1Q8TDS5 423 aa18.77■□□□□ 0.6
PCNX1-209ENST00000554879 SMARCE1Q969G3 411 aa18.77■□□□□ 0.6
PCNX1-209ENST00000554879 FLT1P17948 1338 aa18.77■□□□□ 0.6
PCNX1-209ENST00000554879 PFKFB1P16118 471 aa18.77■□□□□ 0.6
PCNX1-209ENST00000554879 HNRNPH2P55795 449 aaKnown RBP18.77■□□□□ 0.6
PCNX1-209ENST00000554879 ZBTB12Q9Y330 459 aaPredicted RBP18.77■□□□□ 0.6
PCNX1-209ENST00000554879 GNA11P29992 359 aa18.77■□□□□ 0.59
PCNX1-209ENST00000554879 CFAP100Q494V2 611 aa18.77■□□□□ 0.59
PCNX1-209ENST00000554879 SPICE1Q8N0Z3 855 aa18.77■□□□□ 0.59
PCNX1-209ENST00000554879 CEP95Q96GE4 821 aa18.77■□□□□ 0.59
PCNX1-209ENST00000554879 TCP11L1Q9NUJ3 509 aa18.77■□□□□ 0.59
PCNX1-209ENST00000554879 ELP1O95163 1332 aa18.76■□□□□ 0.59
PCNX1-209ENST00000554879 KRT18P05783 430 aaKnown RBP18.76■□□□□ 0.59
PCNX1-209ENST00000554879 HOXA10P31260 410 aaPredicted RBP18.76■□□□□ 0.59
PCNX1-209ENST00000554879 PCMTD1Q96MG8 357 aaPredicted RBP18.76■□□□□ 0.59
PCNX1-209ENST00000554879 SCAF8Q9UPN6 1271 aaKnown RBP18.76■□□□□ 0.59
PCNX1-209ENST00000554879 PRKG1Q13976 671 aa18.76■□□□□ 0.59
PCNX1-209ENST00000554879 KCTD1Q719H9 257 aa18.76■□□□□ 0.59
PCNX1-209ENST00000554879 TRMT1LQ7Z2T5 733 aaKnown RBP18.76■□□□□ 0.59
PCNX1-209ENST00000554879 STAG2Q8N3U4 1231 aa18.76■□□□□ 0.59
PCNX1-209ENST00000554879 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.76■□□□□ 0.59
PCNX1-209ENST00000554879 DPEP1P16444 411 aa18.75■□□□□ 0.59
PCNX1-209ENST00000554879 TMTC3Q6ZXV5 915 aa18.75■□□□□ 0.59
PCNX1-209ENST00000554879 ADAMTS7Q9UKP4 1686 aa18.75■□□□□ 0.59
PCNX1-209ENST00000554879 SMCO2A6NFE2 343 aa18.75■□□□□ 0.59
PCNX1-209ENST00000554879 E2F4Q16254 413 aa18.75■□□□□ 0.59
PCNX1-209ENST00000554879 DGKHQ86XP1 1220 aa18.75■□□□□ 0.59
PCNX1-209ENST00000554879 PIM2Q9P1W9 311 aa18.75■□□□□ 0.59
PCNX1-209ENST00000554879 BIN2Q9UBW5 565 aaPredicted RBP18.75■□□□□ 0.59
PCNX1-209ENST00000554879 INF2Q27J81 1249 aa18.75■□□□□ 0.59
PCNX1-209ENST00000554879 USH1GQ495M9 461 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms