RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 RANBP6O60518 1105 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 PCP11498 1178 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 CTGFP29279 349 aa15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 HERVK_113P62684 666 aa15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 PKN2Q16513 984 aaKnown RBP15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 MFSD6Q6ZSS7 791 aa15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 SPICE1Q8N0Z3 855 aa15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 ANKRD13CQ8N6S4 541 aa15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 NKX2-3Q8TAU0 364 aa15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 STAG1Q8WVM7 1258 aa15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 PLIN4Q96Q06 1357 aa15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 EFCC1Q9HA90 598 aa15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 RBPJLQ9UBG7 517 aa15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 TRIM17Q9Y577 477 aa15.3■□□□□ 0.04
MTHFD1-209ENST00000554768 PTPRFP10586 1907 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 LOC285556D6RIA3 1793 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 TSPY2A6NKD2 308 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 F5H6K3 240 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 TTLL1O95922 423 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 NOVP48745 357 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 KLRC3Q07444 240 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 KIF22Q14807 665 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 ARHGEF6Q15052 776 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 IMMTQ16891 758 aaKnown RBP15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 MAP4K1Q92918 833 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 TRIM47Q96LD4 638 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 ESYT1Q9BSJ8 1104 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 RNF41Q9H4P4 317 aaPredicted RBP15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 MORF4L1Q9UBU8 362 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 SYNPO2Q9UMS6 1093 aa15.29■□□□□ 0.04
MTHFD1-209ENST00000554768 NMT2O60551 498 aa15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 PEX10O60683 326 aa15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 PSMC4P43686 418 aa15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 COG2Q14746 738 aa15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 FAM110CQ1W6H9 321 aa15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 RRP12Q5JTH9 1297 aaKnown RBP15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 GOPCQ9HD26 462 aa15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 TXNRD2Q9NNW7 524 aa15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 TOMM22Q9NS69 142 aa15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 HOXC10Q9NYD6 342 aa15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 HTTP42858 3142 aa15.28■□□□□ 0.04
MTHFD1-209ENST00000554768 WDR46O15213 610 aaKnown RBP15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 ECM2O94769 699 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 GNRH1P01148 92 aa15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 PPP4R3BQ5MIZ7 849 aa15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 FBXO46Q6PJ61 603 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 LBX2Q6XYB7 198 aa15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 GPRC5AQ8NFJ5 357 aa15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 GTF3C2Q8WUA4 911 aaPredicted RBP15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 ABHD8Q96I13 439 aa15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 TANGO6Q9C0B7 1094 aa15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 LSG1Q9H089 658 aaKnown RBP15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 TCP11L1Q9NUJ3 509 aa15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 PTPN22Q9Y2R2 807 aa15.27■□□□□ 0.04
MTHFD1-209ENST00000554768 NEDD4P46934 1319 aa15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 SPDYE16A6NNV3 312 aaPredicted RBP15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 CDC45O75419 566 aa15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 CNMDO75829 334 aa15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 FMNL1O95466 1100 aaPredicted RBP15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 NDUFB10O96000 172 aa15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 NT5C2P49902 561 aa15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 Q3C1V9 767 aa15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 KIAA1211Q6ZU35 1233 aa15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 LRRC47Q8N1G4 583 aaKnown RBP15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 GMCL1P1Q8NEA9 526 aa15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 ESR2Q92731 530 aa15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 STX8Q9UNK0 236 aa15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 RABGAP1Q9Y3P9 1069 aa15.26■□□□□ 0.03
MTHFD1-209ENST00000554768 GREB1LQ9C091 1923 aaPredicted RBP15.25■□□□□ 0.03
MTHFD1-209ENST00000554768 RAD21O60216 631 aa15.25■□□□□ 0.03
MTHFD1-209ENST00000554768 FLOT1O75955 427 aa15.25■□□□□ 0.03
MTHFD1-209ENST00000554768 CYP21A2P08686 494 aa15.25■□□□□ 0.03
MTHFD1-209ENST00000554768 DSG3P32926 999 aa15.25■□□□□ 0.03
MTHFD1-209ENST00000554768 FCGRTP55899 365 aa15.25■□□□□ 0.03
MTHFD1-209ENST00000554768 FAM83BQ5T0W9 1011 aa15.25■□□□□ 0.03
MTHFD1-209ENST00000554768 NUP88Q99567 741 aaPredicted RBP15.25■□□□□ 0.03
MTHFD1-209ENST00000554768 HPS5Q9UPZ3 1129 aa15.25■□□□□ 0.03
MTHFD1-209ENST00000554768 KDM4AO75164 1064 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 ERVK-9P63128 1117 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 ERVK-24P63145 666 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 SLFN13Q68D06 897 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 RCSD1Q6JBY9 416 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 TTC14Q96N46 770 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 PAGR1Q9BTK6 254 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 FBXO28Q9NVF7 368 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 BTBD7Q9P203 1132 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 ZSWIM5Q9P217 1185 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 SRRDQ9UH36 339 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 ADAMTS5Q9UNA0 930 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 TAF6LQ9Y6J9 622 aa15.24■□□□□ 0.03
MTHFD1-209ENST00000554768 MYPNQ86TC9 1320 aa15.23■□□□□ 0.03
MTHFD1-209ENST00000554768 B4E1Z4 1266 aa15.23■□□□□ 0.03
MTHFD1-209ENST00000554768 TNPO2O14787 897 aaKnown RBP15.23■□□□□ 0.03
MTHFD1-209ENST00000554768 TOP1P11387 765 aaKnown RBP15.23■□□□□ 0.03
MTHFD1-209ENST00000554768 HOXD10P28358 340 aa15.23■□□□□ 0.03
MTHFD1-209ENST00000554768 PRMT2P55345 433 aa15.23■□□□□ 0.03
MTHFD1-209ENST00000554768 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
MTHFD1-209ENST00000554768 ATG4CQ96DT6 458 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms