RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 GLTPD2A6NH11 291 aa12.62□□□□□ -0.39
PABPN1-203ENST00000553960 XBP1P17861 261 aa12.62□□□□□ -0.39
PABPN1-203ENST00000553960 CACNB3P54284 484 aa12.62□□□□□ -0.39
PABPN1-203ENST00000553960 PFKFB3Q16875 520 aaPredicted RBP12.62□□□□□ -0.39
PABPN1-203ENST00000553960 CSPP1Q1MSJ5 1256 aa12.62□□□□□ -0.39
PABPN1-203ENST00000553960 RBM26Q5T8P6 1007 aaKnown RBP12.62□□□□□ -0.39
PABPN1-203ENST00000553960 ZSCAN29Q8IWY8 852 aaPredicted RBP12.62□□□□□ -0.39
PABPN1-203ENST00000553960 C8orf76Q96K31 380 aa12.62□□□□□ -0.39
PABPN1-203ENST00000553960 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
PABPN1-203ENST00000553960 MAF1Q9H063 256 aa12.62□□□□□ -0.39
PABPN1-203ENST00000553960 DEFB129Q9H1M3 183 aa12.62□□□□□ -0.39
PABPN1-203ENST00000553960 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.62□□□□□ -0.39
PABPN1-203ENST00000553960 CABP5Q9NP86 173 aa12.62□□□□□ -0.39
PABPN1-203ENST00000553960 STX8Q9UNK0 236 aa12.62□□□□□ -0.39
PABPN1-203ENST00000553960 PAPPA2Q9BXP8 1791 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 TCP10L2B9ZVM9 353 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 EGFRP00533 1210 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 PARP1P09874 1014 aaKnown RBP12.61□□□□□ -0.39
PABPN1-203ENST00000553960 HIRAP54198 1017 aaPredicted RBP12.61□□□□□ -0.39
PABPN1-203ENST00000553960 ZNF543Q08ER8 600 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 NOL9Q5SY16 702 aaKnown RBP12.61□□□□□ -0.39
PABPN1-203ENST00000553960 SRBD1Q8N5C6 995 aaKnown RBP12.61□□□□□ -0.39
PABPN1-203ENST00000553960 DAGLBQ8NCG7 672 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 ALG1Q9BT22 464 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 ANP32EQ9BTT0 268 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 TRIM34Q9BYJ4 488 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 TMEM39BQ9GZU3 492 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 SH2D4AQ9H788 454 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 HACL1Q9UJ83 578 aa12.61□□□□□ -0.39
PABPN1-203ENST00000553960 CLRN2A0PK11 232 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 IQCA1LA6NCM1 817 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 KLRF2D3W0D1 207 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 H3BQV1 296 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 MMP1P03956 469 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 LMOD1P29536 600 aaPredicted RBP12.6□□□□□ -0.39
PABPN1-203ENST00000553960 TRAF1Q13077 416 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 SUPT20HL1Q3ZLR7 823 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 IFFO2Q5TF58 517 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 PPP1R18Q6NYC8 613 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 CDC37L1Q7L3B6 337 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 SAMD7Q7Z3H4 446 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 WDR18Q9BV38 432 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 PHF20Q9BVI0 1012 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 CFAP45Q9UL16 551 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 ZBTB21Q9ULJ3 1066 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 GJA3Q9Y6H8 435 aa12.6□□□□□ -0.39
PABPN1-203ENST00000553960 SHTN1A0MZ66 631 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 CYTH3O43739 400 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 SCG2P13521 617 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 CALML3P27482 149 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 EPS15P42566 896 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 AKAP17AQ02040 695 aaKnown RBP12.59□□□□□ -0.39
PABPN1-203ENST00000553960 KIF23Q02241 960 aaPredicted RBP12.59□□□□□ -0.39
PABPN1-203ENST00000553960 ICA1Q05084 483 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 KRT40Q6A162 431 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 PNMA8AQ86V59 439 aaPredicted RBP12.59□□□□□ -0.39
PABPN1-203ENST00000553960 TRPM4Q8TD43 1214 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 CCDC12Q8WUD4 166 aaPredicted RBP12.59□□□□□ -0.39
PABPN1-203ENST00000553960 NUP133Q8WUM0 1156 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 LPAR1Q92633 364 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 MYL10Q9BUA6 226 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 KIAA1683Q9H0B3 1180 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 GLT8D2Q9H1C3 349 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 LMBRD1Q9NUN5 540 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 POLR3EQ9NVU0 708 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 CLIP2Q9UDT6 1046 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 RCOR1Q9UKL0 485 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 ATAD5Q96QE3 1844 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 POLR2AP24928 1970 aaKnown RBP12.59□□□□□ -0.39
PABPN1-203ENST00000553960 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
PABPN1-203ENST00000553960 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.4
PABPN1-203ENST00000553960 PLEKHA8P1O95397 391 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 EEF2P13639 858 aaKnown RBP12.58□□□□□ -0.4
PABPN1-203ENST00000553960 TRAPPC10P48553 1259 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 NASPP49321 788 aaPredicted RBP12.58□□□□□ -0.4
PABPN1-203ENST00000553960 KRT85P78386 507 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 TRIM29Q14134 588 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 RRP1BQ14684 758 aaKnown RBP12.58□□□□□ -0.4
PABPN1-203ENST00000553960 SEPT2Q15019 361 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 NPY5RQ15761 445 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 SLC35G1Q2M3R5 365 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 KLHL40Q2TBA0 621 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 TBC1D10BQ4KMP7 808 aaPredicted RBP12.58□□□□□ -0.4
PABPN1-203ENST00000553960 MCTP2Q6DN12 878 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 CCDC148Q8NFR7 591 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 PHKBQ93100 1093 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 DDX11Q96FC9 970 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 SLC26A6Q9BXS9 759 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 ZNF341Q9BYN7 854 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 ZMYND12Q9H0C1 365 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 VEZTQ9HBM0 779 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 ARHGEF10LQ9HCE6 1279 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.58□□□□□ -0.4
PABPN1-203ENST00000553960 BARHL2Q9NY43 387 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 RTEL1Q9NZ71 1219 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 PNMA2Q9UL42 364 aa12.58□□□□□ -0.4
PABPN1-203ENST00000553960 V9GY48 417 aaPredicted RBP12.58□□□□□ -0.4
PABPN1-203ENST00000553960 BAZ2BQ9UIF8 2168 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms