RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 GCC1Q96CN9 775 aa21.46■■□□□ 1.03
PNN-202ENST00000553331 SEC62Q99442 399 aaKnown RBP21.46■■□□□ 1.03
PNN-202ENST00000553331 MKNK2Q9HBH9 465 aa21.46■■□□□ 1.03
PNN-202ENST00000553331 SGPL1O95470 568 aa21.45■■□□□ 1.02
PNN-202ENST00000553331 HDAC1Q13547 482 aaPredicted RBP21.45■■□□□ 1.02
PNN-202ENST00000553331 SIAH1Q8IUQ4 282 aa21.45■■□□□ 1.02
PNN-202ENST00000553331 SOCS4Q8WXH5 440 aa21.45■■□□□ 1.02
PNN-202ENST00000553331 SH2D4AQ9H788 454 aa21.45■■□□□ 1.02
PNN-202ENST00000553331 BTBD7Q9P203 1132 aa21.45■■□□□ 1.02
PNN-202ENST00000553331 EEF2P13639 858 aaKnown RBP21.44■■□□□ 1.02
PNN-202ENST00000553331 GNAT2P19087 354 aa21.44■■□□□ 1.02
PNN-202ENST00000553331 COG2Q14746 738 aa21.44■■□□□ 1.02
PNN-202ENST00000553331 SBK1Q52WX2 424 aa21.44■■□□□ 1.02
PNN-202ENST00000553331 TRIB2Q92519 343 aa21.44■■□□□ 1.02
PNN-202ENST00000553331 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.44■■□□□ 1.028e-10■□□□□ 9
PNN-202ENST00000553331 EPB41L4AQ9HCS5 686 aaPredicted RBP21.44■■□□□ 1.02
PNN-202ENST00000553331 RGS2P41220 211 aa21.43■■□□□ 1.02
PNN-202ENST00000553331 GIMAP6Q6P9H5 292 aa21.43■■□□□ 1.02
PNN-202ENST00000553331 DPF3Q92784 378 aa21.43■■□□□ 1.02
PNN-202ENST00000553331 VCPKMTQ9H867 229 aa21.43■■□□□ 1.02
PNN-202ENST00000553331 KANSL2Q9H9L4 492 aa21.43■■□□□ 1.02
PNN-202ENST00000553331 HOXC10Q9NYD6 342 aa21.43■■□□□ 1.02
PNN-202ENST00000553331 TMX2Q9Y320 296 aa21.43■■□□□ 1.02
PNN-202ENST00000553331 PATL2C9JE40 543 aaKnown RBP21.42■■□□□ 1.02
PNN-202ENST00000553331 FLOT1O75955 427 aa21.42■■□□□ 1.02
PNN-202ENST00000553331 FARP2O94887 1054 aaPredicted RBP21.42■■□□□ 1.02
PNN-202ENST00000553331 ZKSCAN1P17029 563 aaPredicted RBP21.42■■□□□ 1.02
PNN-202ENST00000553331 MORN1Q5T089 497 aa21.42■■□□□ 1.02
PNN-202ENST00000553331 B4GALNT3Q6L9W6 998 aa21.42■■□□□ 1.02
PNN-202ENST00000553331 IFNL3Q8IZI9 196 aa21.42■■□□□ 1.02
PNN-202ENST00000553331 LPAR1Q92633 364 aa21.42■■□□□ 1.02
PNN-202ENST00000553331 HMX1Q9NP08 348 aaPredicted RBP21.42■■□□□ 1.02
PNN-202ENST00000553331 PAK6Q9NQU5 681 aaPredicted RBP21.42■■□□□ 1.02
PNN-202ENST00000553331 SALL3Q9BXA9 1300 aa21.41■■□□□ 1.02
PNN-202ENST00000553331 PRDM1O75626 825 aa21.41■■□□□ 1.02
PNN-202ENST00000553331 PLS1Q14651 629 aa21.41■■□□□ 1.02
PNN-202ENST00000553331 CCL14Q16627 93 aa21.41■■□□□ 1.02
PNN-202ENST00000553331 ZMYM1Q5SVZ6 1142 aa21.41■■□□□ 1.02
PNN-202ENST00000553331 LBX2Q6XYB7 198 aa21.41■■□□□ 1.02
PNN-202ENST00000553331 EXOC6Q8TAG9 804 aa21.41■■□□□ 1.02
PNN-202ENST00000553331 NACAP1Q9BZK3 213 aa21.41■■□□□ 1.02
PNN-202ENST00000553331 LNPKQ9C0E8 428 aa21.41■■□□□ 1.02
PNN-202ENST00000553331 RWDD1Q9H446 243 aaPredicted RBP21.41■■□□□ 1.02
PNN-202ENST00000553331 IVNS1ABPQ9Y6Y0 642 aa21.41■■□□□ 1.02
PNN-202ENST00000553331 MKI67P46013 3256 aaKnown RBP21.41■■□□□ 1.02
PNN-202ENST00000553331 RPTORQ8N122 1335 aa21.4■■□□□ 1.02
PNN-202ENST00000553331 PRKAR2AP13861 404 aaKnown RBP21.4■■□□□ 1.02
PNN-202ENST00000553331 RASA1P20936 1047 aa21.4■■□□□ 1.02
PNN-202ENST00000553331 PDE1AP54750 535 aa21.4■■□□□ 1.02
PNN-202ENST00000553331 CCDC129Q6ZRS4 1044 aa21.4■■□□□ 1.02
PNN-202ENST00000553331 GOPCQ9HD26 462 aa21.4■■□□□ 1.02
PNN-202ENST00000553331 WDR46O15213 610 aaKnown RBP21.39■■□□□ 1.01
PNN-202ENST00000553331 XRCC5P13010 732 aaKnown RBP21.39■■□□□ 1.01
PNN-202ENST00000553331 DSG3P32926 999 aa21.39■■□□□ 1.01
PNN-202ENST00000553331 MAP2K5Q13163 448 aa21.39■■□□□ 1.01
PNN-202ENST00000553331 TRMT44Q8IYL2 757 aaKnown RBP21.39■■□□□ 1.01
PNN-202ENST00000553331 ZNF444Q8N0Y2 327 aaPredicted RBP21.39■■□□□ 1.01
PNN-202ENST00000553331 USP6NLQ92738 828 aa21.39■■□□□ 1.01
PNN-202ENST00000553331 EVI5LQ96CN4 794 aa21.39■■□□□ 1.01
PNN-202ENST00000553331 ATG4CQ96DT6 458 aa21.39■■□□□ 1.01
PNN-202ENST00000553331 APBA2Q99767 749 aa21.39■■□□□ 1.01
PNN-202ENST00000553331 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.39■■□□□ 1.01
PNN-202ENST00000553331 NAPBQ9H115 298 aa21.39■■□□□ 1.01
PNN-202ENST00000553331 RLFQ13129 1914 aa21.39■■□□□ 1.01
PNN-202ENST00000553331 PTPREP23469 700 aa21.38■■□□□ 1.01
PNN-202ENST00000553331 AAMPQ13685 434 aa21.38■■□□□ 1.01
PNN-202ENST00000553331 MOV10L1Q9BXT6 1211 aaKnown RBP21.38■■□□□ 1.01
PNN-202ENST00000553331 STAP2Q9UGK3 403 aa21.38■■□□□ 1.01
PNN-202ENST00000553331 ROBO3Q96MS0 1386 aa21.37■■□□□ 1.01
PNN-202ENST00000553331 SLC15A5A6NIM6 579 aa21.37■■□□□ 1.01
PNN-202ENST00000553331 CACNB2Q08289 660 aaPredicted RBP21.37■■□□□ 1.01
PNN-202ENST00000553331 FAM83BQ5T0W9 1011 aa21.37■■□□□ 1.01
PNN-202ENST00000553331 HTATIP2Q9BUP3 242 aa21.37■■□□□ 1.01
PNN-202ENST00000553331 SPATC1LQ9H0A9 340 aa21.37■■□□□ 1.01
PNN-202ENST00000553331 ZNF287Q9HBT7 754 aa21.37■■□□□ 1.01
PNN-202ENST00000553331 FBXO28Q9NVF7 368 aa21.37■■□□□ 1.01
PNN-202ENST00000553331 MYH4Q9Y623 1939 aa21.37■■□□□ 1.01
PNN-202ENST00000553331 PARP14Q460N5 1801 aa21.36■■□□□ 1.01
PNN-202ENST00000553331 GREB1LQ9C091 1923 aaPredicted RBP21.36■■□□□ 1.01
PNN-202ENST00000553331 IGHDP01880 384 aa21.36■■□□□ 1.01
PNN-202ENST00000553331 ERCC3P19447 782 aa21.36■■□□□ 1.01
PNN-202ENST00000553331 UBE2Q1Q7Z7E8 422 aa21.36■■□□□ 1.01
PNN-202ENST00000553331 NCAPG2Q86XI2 1143 aa21.36■■□□□ 1.01
PNN-202ENST00000553331 MB21D1Q8N884 522 aa21.36■■□□□ 1.01
PNN-202ENST00000553331 CRISPLD2Q9H0B8 497 aa21.36■■□□□ 1.01
PNN-202ENST00000553331 CLIP2Q9UDT6 1046 aa21.36■■□□□ 1.01
PNN-202ENST00000553331 COL11A1P12107 1806 aaPredicted RBP21.36■■□□□ 1.01
PNN-202ENST00000553331 A0A0G2JMZ2 1700 aa21.35■■□□□ 1.01
PNN-202ENST00000553331 TRIM6-TRIM34B2RNG4 842 aa21.35■■□□□ 1.01
PNN-202ENST00000553331 H0YGN5 161 aa21.35■■□□□ 1.01
PNN-202ENST00000553331 SLC3A2P08195 630 aaKnown RBP21.35■■□□□ 1.01
PNN-202ENST00000553331 CCND3P30281 292 aaPredicted RBP21.35■■□□□ 1.01
PNN-202ENST00000553331 PDE4BQ07343 736 aa21.35■■□□□ 1.01
PNN-202ENST00000553331 PPARAQ07869 468 aa21.35■■□□□ 1.01
PNN-202ENST00000553331 DPP9Q86TI2 863 aa21.35■■□□□ 1.01
PNN-202ENST00000553331 DIS3LQ8TF46 1054 aaKnown RBP21.35■■□□□ 1.01
PNN-202ENST00000553331 PAWRQ96IZ0 340 aaKnown RBP21.35■■□□□ 1.01
PNN-202ENST00000553331 NUP88Q99567 741 aaPredicted RBP21.35■■□□□ 1.01
PNN-202ENST00000553331 FLRT1Q9NZU1 646 aa21.35■■□□□ 1.01
PNN-202ENST00000553331 GRB14Q14449 540 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms