RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 PAK6Q9NQU5 681 aaPredicted RBP16.77■□□□□ 0.28
DDX54-210ENST00000552375 Q3C1V9 767 aa16.76■□□□□ 0.27
DDX54-210ENST00000552375 CCDC129Q6ZRS4 1044 aa16.76■□□□□ 0.27
DDX54-210ENST00000552375 GPR142Q7Z601 462 aa16.76■□□□□ 0.27
DDX54-210ENST00000552375 CCAR1Q8IX12 1150 aaKnown RBP16.76■□□□□ 0.27
DDX54-210ENST00000552375 LPAR1Q92633 364 aa16.76■□□□□ 0.27
DDX54-210ENST00000552375 NUDT12Q9BQG2 462 aa16.76■□□□□ 0.27
DDX54-210ENST00000552375 ARHGEF10LQ9HCE6 1279 aa16.76■□□□□ 0.27
DDX54-210ENST00000552375 EPB41L4AQ9HCS5 686 aaPredicted RBP16.76■□□□□ 0.27
DDX54-210ENST00000552375 CEP290O15078 2479 aa16.76■□□□□ 0.27
DDX54-210ENST00000552375 MYH4Q9Y623 1939 aa16.76■□□□□ 0.27
DDX54-210ENST00000552375 LAMA4Q16363 1823 aa16.75■□□□□ 0.27
DDX54-210ENST00000552375 GSG1L2A8MUP6 293 aa16.75■□□□□ 0.27
DDX54-210ENST00000552375 XRCC5P13010 732 aaKnown RBP16.75■□□□□ 0.27
DDX54-210ENST00000552375 GNAT2P19087 354 aa16.75■□□□□ 0.27
DDX54-210ENST00000552375 CCNA1P78396 465 aa16.75■□□□□ 0.27
DDX54-210ENST00000552375 SBK1Q52WX2 424 aa16.75■□□□□ 0.27
DDX54-210ENST00000552375 UBE2Q1Q7Z7E8 422 aa16.75■□□□□ 0.27
DDX54-210ENST00000552375 TRIB2Q92519 343 aa16.75■□□□□ 0.27
DDX54-210ENST00000552375 TANGO6Q9C0B7 1094 aa16.75■□□□□ 0.27
DDX54-210ENST00000552375 TMX2Q9Y320 296 aa16.75■□□□□ 0.27
DDX54-210ENST00000552375 SGPL1O95470 568 aa16.74■□□□□ 0.27
DDX54-210ENST00000552375 CYP2B6P20813 491 aa16.74■□□□□ 0.27
DDX54-210ENST00000552375 PLEKHH3Q7Z736 793 aa16.74■□□□□ 0.27
DDX54-210ENST00000552375 SIAH1Q8IUQ4 282 aa16.74■□□□□ 0.27
DDX54-210ENST00000552375 STK11IPQ8N1F8 1099 aa16.74■□□□□ 0.27
DDX54-210ENST00000552375 USP6NLQ92738 828 aa16.74■□□□□ 0.27
DDX54-210ENST00000552375 EVI5LQ96CN4 794 aa16.74■□□□□ 0.27
DDX54-210ENST00000552375 DEFB118Q96PH6 123 aa16.74■□□□□ 0.27
DDX54-210ENST00000552375 APBA2Q99767 749 aa16.74■□□□□ 0.27
DDX54-210ENST00000552375 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.74■□□□□ 0.27
DDX54-210ENST00000552375 VCPKMTQ9H867 229 aa16.74■□□□□ 0.27
DDX54-210ENST00000552375 GREB1LQ9C091 1923 aaPredicted RBP16.74■□□□□ 0.27
DDX54-210ENST00000552375 FARP2O94887 1054 aaPredicted RBP16.73■□□□□ 0.27
DDX54-210ENST00000552375 ZKSCAN1P17029 563 aaPredicted RBP16.73■□□□□ 0.27
DDX54-210ENST00000552375 CAPN2P17655 700 aa16.73■□□□□ 0.27
DDX54-210ENST00000552375 RGS2P41220 211 aa16.73■□□□□ 0.27
DDX54-210ENST00000552375 TDO2P48775 406 aa16.73■□□□□ 0.27
DDX54-210ENST00000552375 KIAA1755Q5JYT7 1200 aa16.73■□□□□ 0.27
DDX54-210ENST00000552375 ZMYM1Q5SVZ6 1142 aa16.73■□□□□ 0.27
DDX54-210ENST00000552375 MORN1Q5T089 497 aa16.73■□□□□ 0.27
DDX54-210ENST00000552375 KANSL2Q9H9L4 492 aa16.73■□□□□ 0.27
DDX54-210ENST00000552375 CWC22Q9HCG8 908 aaKnown RBP16.73■□□□□ 0.27
DDX54-210ENST00000552375 BTBD7Q9P203 1132 aa16.73■□□□□ 0.27
DDX54-210ENST00000552375 DOCK3Q8IZD9 2030 aa16.73■□□□□ 0.27
DDX54-210ENST00000552375 A0A0D9SFI3 127 aa16.72■□□□□ 0.27
DDX54-210ENST00000552375 WDR46O15213 610 aaKnown RBP16.72■□□□□ 0.27
DDX54-210ENST00000552375 APPP05067 770 aa16.72■□□□□ 0.27
DDX54-210ENST00000552375 RASA1P20936 1047 aa16.72■□□□□ 0.27
DDX54-210ENST00000552375 TRIM32Q13049 653 aa16.72■□□□□ 0.27
DDX54-210ENST00000552375 MAP3K21Q5TCX8 1036 aa16.72■□□□□ 0.27
DDX54-210ENST00000552375 SKAP1Q86WV1 359 aa16.72■□□□□ 0.27
DDX54-210ENST00000552375 TRMT44Q8IYL2 757 aaKnown RBP16.72■□□□□ 0.27
DDX54-210ENST00000552375 SPICE1Q8N0Z3 855 aa16.72■□□□□ 0.27
DDX54-210ENST00000552375 FAM227BQ96M60 508 aa16.72■□□□□ 0.27
DDX54-210ENST00000552375 CRISPLD2Q9H0B8 497 aa16.72■□□□□ 0.27
DDX54-210ENST00000552375 RPTORQ8N122 1335 aa16.71■□□□□ 0.27
DDX54-210ENST00000552375 A0A0G2JMZ2 1700 aa16.71■□□□□ 0.27
DDX54-210ENST00000552375 PLXNB2O15031 1838 aa16.71■□□□□ 0.27
DDX54-210ENST00000552375 MINDY4BA8MYZ0 360 aa16.71■□□□□ 0.27
DDX54-210ENST00000552375 EEF2P13639 858 aaKnown RBP16.71■□□□□ 0.27
DDX54-210ENST00000552375 PRKAR2AP13861 404 aaKnown RBP16.71■□□□□ 0.27
DDX54-210ENST00000552375 MAP2K5Q13163 448 aa16.71■□□□□ 0.27
DDX54-210ENST00000552375 NMIQ13287 307 aaPredicted RBP16.71■□□□□ 0.27
DDX54-210ENST00000552375 COG2Q14746 738 aa16.71■□□□□ 0.27
DDX54-210ENST00000552375 MB21D1Q8N884 522 aa16.71■□□□□ 0.27
DDX54-210ENST00000552375 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.71■□□□□ 0.27
DDX54-210ENST00000552375 NACAP1Q9BZK3 213 aa16.71■□□□□ 0.27
DDX54-210ENST00000552375 HOXC10Q9NYD6 342 aa16.71■□□□□ 0.27
DDX54-210ENST00000552375 FLOT1O75955 427 aa16.7■□□□□ 0.26
DDX54-210ENST00000552375 SLC34A2O95436 690 aa16.7■□□□□ 0.26
DDX54-210ENST00000552375 NEFLP07196 543 aa16.7■□□□□ 0.26
DDX54-210ENST00000552375 ATP2B2Q01814 1243 aa16.7■□□□□ 0.26
DDX54-210ENST00000552375 GRB14Q14449 540 aa16.7■□□□□ 0.26
DDX54-210ENST00000552375 WDR78Q5VTH9 848 aa16.7■□□□□ 0.26
DDX54-210ENST00000552375 MKNK2Q9HBH9 465 aa16.7■□□□□ 0.26
DDX54-210ENST00000552375 ZNF287Q9HBT7 754 aa16.7■□□□□ 0.26
DDX54-210ENST00000552375 GOPCQ9HD26 462 aa16.7■□□□□ 0.26
DDX54-210ENST00000552375 HMX1Q9NP08 348 aaPredicted RBP16.7■□□□□ 0.26
DDX54-210ENST00000552375 PLIN4Q96Q06 1357 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 PARP14Q460N5 1801 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 SLC15A5A6NIM6 579 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 PATL2C9JE40 543 aaKnown RBP16.69■□□□□ 0.26
DDX54-210ENST00000552375 TFRCP02786 760 aaKnown RBP16.69■□□□□ 0.26
DDX54-210ENST00000552375 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
DDX54-210ENST00000552375 GSPT1P15170 499 aaKnown RBP16.69■□□□□ 0.26
DDX54-210ENST00000552375 PTPREP23469 700 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 DSG3P32926 999 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 TTC22Q5TAA0 569 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 IFNL3Q8IZI9 196 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 ATG4CQ96DT6 458 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 HTATIP2Q9BUP3 242 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 MOV10L1Q9BXT6 1211 aaKnown RBP16.69■□□□□ 0.26
DDX54-210ENST00000552375 SPATC1LQ9H0A9 340 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 OSBPL3Q9H4L5 887 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 IVNS1ABPQ9Y6Y0 642 aa16.69■□□□□ 0.26
DDX54-210ENST00000552375 HOXC6P09630 235 aa16.68■□□□□ 0.26
DDX54-210ENST00000552375 CCL14Q16627 93 aa16.68■□□□□ 0.26
DDX54-210ENST00000552375 VPS53Q5VIR6 699 aa16.68■□□□□ 0.26
DDX54-210ENST00000552375 ZNF589Q86UQ0 364 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms