RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 SOX1O00570 391 aaPredicted RBP20.54■□□□□ 0.88
CDK4-208ENST00000551706 ZNF213O14771 459 aa20.54■□□□□ 0.88
CDK4-208ENST00000551706 SGSM2O43147 1006 aa20.54■□□□□ 0.88
CDK4-208ENST00000551706 PRDM1O75626 825 aa20.54■□□□□ 0.88
CDK4-208ENST00000551706 GJA8P48165 433 aa20.54■□□□□ 0.88
CDK4-208ENST00000551706 CTDSPL2Q05D32 466 aa20.54■□□□□ 0.88
CDK4-208ENST00000551706 TREML2Q5T2D2 321 aa20.54■□□□□ 0.88
CDK4-208ENST00000551706 ACER1Q8TDN7 264 aa20.54■□□□□ 0.88
CDK4-208ENST00000551706 EMILIN3Q9NT22 766 aa20.54■□□□□ 0.88
CDK4-208ENST00000551706 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.54■□□□□ 0.88
CDK4-208ENST00000551706 ORC4O43929 436 aa20.53■□□□□ 0.88
CDK4-208ENST00000551706 FGRP09769 529 aa20.53■□□□□ 0.88
CDK4-208ENST00000551706 TSPY3P0CV98 308 aa20.53■□□□□ 0.88
CDK4-208ENST00000551706 TSPY8P0CW00 308 aa20.53■□□□□ 0.88
CDK4-208ENST00000551706 OSBPP22059 807 aa20.53■□□□□ 0.88
CDK4-208ENST00000551706 HOXA7P31268 230 aaPredicted RBP20.53■□□□□ 0.88
CDK4-208ENST00000551706 NT5C2P49902 561 aa20.53■□□□□ 0.88
CDK4-208ENST00000551706 PPP4R3BQ5MIZ7 849 aa20.53■□□□□ 0.88
CDK4-208ENST00000551706 CASC1Q6TDU7 716 aa20.53■□□□□ 0.88
CDK4-208ENST00000551706 LRCH3Q96II8 777 aa20.53■□□□□ 0.88
CDK4-208ENST00000551706 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.53■□□□□ 0.88
CDK4-208ENST00000551706 IL25Q9H293 177 aa20.53■□□□□ 0.88
CDK4-208ENST00000551706 RNF41Q9H4P4 317 aaPredicted RBP20.53■□□□□ 0.88
CDK4-208ENST00000551706 PTPRFP10586 1907 aa20.53■□□□□ 0.88
CDK4-208ENST00000551706 PLIN4Q96Q06 1357 aa20.52■□□□□ 0.88
CDK4-208ENST00000551706 GJB1P08034 283 aa20.52■□□□□ 0.88
CDK4-208ENST00000551706 ZYXQ15942 572 aaKnown RBP20.52■□□□□ 0.88
CDK4-208ENST00000551706 IMMTQ16891 758 aaKnown RBP20.52■□□□□ 0.88
CDK4-208ENST00000551706 NEDD1Q8NHV4 660 aa20.52■□□□□ 0.88
CDK4-208ENST00000551706 SMCR8Q8TEV9 937 aaPredicted RBP20.52■□□□□ 0.88
CDK4-208ENST00000551706 LPAR1Q92633 364 aa20.52■□□□□ 0.88
CDK4-208ENST00000551706 TMX2Q9Y320 296 aa20.52■□□□□ 0.88
CDK4-208ENST00000551706 MYH8P13535 1937 aa20.52■□□□□ 0.88
CDK4-208ENST00000551706 LOC285556D6RIA3 1793 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 A0A1W2PRG0 241 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 CYP2C8P10632 490 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 EEF2P13639 858 aaKnown RBP20.51■□□□□ 0.87
CDK4-208ENST00000551706 HAND2P61296 217 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 TFAP4Q01664 338 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 ATP2B2Q01814 1243 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 AKNAD1Q5T1N1 836 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 MFSD6Q6ZSS7 791 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 KIAA1211Q6ZU35 1233 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 SIAH1Q8IUQ4 282 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 STAG1Q8WVM7 1258 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 NYAP2Q9P242 653 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 ADGRA2Q96PE1 1338 aa20.51■□□□□ 0.87
CDK4-208ENST00000551706 IGKV6D-41A0A0C4DH26 115 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 TSPY2A6NKD2 308 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 CDC45O75419 566 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 ECM2O94769 699 aaPredicted RBP20.5■□□□□ 0.87
CDK4-208ENST00000551706 CCL5P13501 91 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 GRK4P32298 578 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 IRX3P78415 501 aaPredicted RBP20.5■□□□□ 0.87
CDK4-208ENST00000551706 C17orf99Q6UX52 265 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 CLEC10AQ8IUN9 316 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 ASCC2Q9H1I8 757 aaPredicted RBP20.5■□□□□ 0.87
CDK4-208ENST00000551706 VCPKMTQ9H867 229 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 GOPCQ9HD26 462 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 TOMM22Q9NS69 142 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 SRRDQ9UH36 339 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 SYNPO2Q9UMS6 1093 aa20.5■□□□□ 0.87
CDK4-208ENST00000551706 U3KPZ7 1027 aaPredicted RBP20.5■□□□□ 0.87
CDK4-208ENST00000551706 USP17L15C9J2P7 530 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 USP17L13C9JLJ4 530 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 USP17L11C9JVI0 530 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 USP17L18D6R9N7 530 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 USP17L22D6RA61 530 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 USP17L17D6RBQ6 530 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 USP17L19D6RCP7 530 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 USP17L20D6RJB6 530 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 RANBP6O60518 1105 aaKnown RBP20.49■□□□□ 0.87
CDK4-208ENST00000551706 VCAM1P19320 739 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 HOXD10P28358 340 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 GCLCP48506 637 aaPredicted RBP20.49■□□□□ 0.87
CDK4-208ENST00000551706 USP17L24Q0WX57 530 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 FAM47AQ5JRC9 791 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 RAET1EQ8TD07 263 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 ESYT1Q9BSJ8 1104 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 RNF208Q9H0X6 261 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 MTMR4Q9NYA4 1195 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 CPA4Q9UI42 421 aa20.49■□□□□ 0.87
CDK4-208ENST00000551706 TTLL1O95922 423 aa20.48■□□□□ 0.87
CDK4-208ENST00000551706 PSMC4P43686 418 aa20.48■□□□□ 0.87
CDK4-208ENST00000551706 GTF3C2Q8WUA4 911 aaPredicted RBP20.48■□□□□ 0.87
CDK4-208ENST00000551706 CEP95Q96GE4 821 aa20.48■□□□□ 0.87
CDK4-208ENST00000551706 INCENPQ9NQS7 918 aa20.48■□□□□ 0.87
CDK4-208ENST00000551706 EVI5O60447 810 aa20.47■□□□□ 0.87
CDK4-208ENST00000551706 FARP2O94887 1054 aaPredicted RBP20.47■□□□□ 0.87
CDK4-208ENST00000551706 BCRP11274 1271 aa20.47■□□□□ 0.87
CDK4-208ENST00000551706 CTGFP29279 349 aa20.47■□□□□ 0.87
CDK4-208ENST00000551706 PTH1RQ03431 593 aa20.47■□□□□ 0.87
CDK4-208ENST00000551706 RRP12Q5JTH9 1297 aaKnown RBP20.47■□□□□ 0.87
CDK4-208ENST00000551706 TBC1D10CQ8IV04 446 aa20.47■□□□□ 0.87
CDK4-208ENST00000551706 ESR2Q92731 530 aa20.47■□□□□ 0.87
CDK4-208ENST00000551706 MKL1Q969V6 931 aa20.47■□□□□ 0.87
CDK4-208ENST00000551706 TRIM47Q96LD4 638 aa20.47■□□□□ 0.87
CDK4-208ENST00000551706 NBPF3Q9H094 633 aa20.47■□□□□ 0.87
CDK4-208ENST00000551706 RPAP3Q9H6T3 665 aaPredicted RBP20.47■□□□□ 0.87
CDK4-208ENST00000551706 BIN2Q9UBW5 565 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms