RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 IRF7Q92985 503 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 NKD1Q969G9 470 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 ARMC5Q96C12 935 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 SEC16BQ96JE7 1060 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 RHOVQ96L33 236 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 NT5C1AQ9BXI3 368 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 MIR1-1HGQ9H1L0 117 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 SLC12A5Q9H2X9 1139 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 ADAMTS1Q9UHI8 967 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 PPME1Q9Y570 386 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 TTC21AQ8NDW8 1320 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 QRICH2Q9H0J4 1663 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 CCDC7Q96M83 1385 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 KIAA1210Q9ULL0 1709 aa3.36□□□□□ -1.87
CPSF6-207ENST00000551516 MEGF6O75095 1541 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 H3BRJ5 948 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 EXOC5O00471 708 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 SOX1O00570 391 aaPredicted RBP3.35□□□□□ -1.87
CPSF6-207ENST00000551516 CYP27B1O15528 508 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 PAGE1O75459 146 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 EPXP11678 715 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 TFE3P19532 575 aaPredicted RBP3.35□□□□□ -1.87
CPSF6-207ENST00000551516 EPHA1P21709 976 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 BMP6P22004 513 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 AMPD1P23109 780 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 ARNTP27540 789 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 CDC25BP30305 580 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 EVA1CP58658 441 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 HNRNPUQ00839 825 aaKnown RBP eCLIP3.35□□□□□ -1.87
CPSF6-207ENST00000551516 AP3B2Q13367 1082 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 COL9A2Q14055 689 aaPredicted RBP3.35□□□□□ -1.87
CPSF6-207ENST00000551516 SOGA3Q5TF21 947 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 NBPF6Q5VWK0 638 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 SMIM5Q71RC9 77 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 CCDC84Q86UT8 332 aaPredicted RBP3.35□□□□□ -1.87
CPSF6-207ENST00000551516 SULF2Q8IWU5 870 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 KCNH5Q8NCM2 988 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 SLC7A3Q8WY07 619 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 DHX38Q92620 1227 aaKnown RBP3.35□□□□□ -1.87
CPSF6-207ENST00000551516 JARID2Q92833 1246 aaPredicted RBP3.35□□□□□ -1.87
CPSF6-207ENST00000551516 WNT8BQ93098 351 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 EAF1Q96JC9 268 aaPredicted RBP3.35□□□□□ -1.87
CPSF6-207ENST00000551516 NBPF4Q96M43 638 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 SIN3AQ96ST3 1273 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 MDFIQ99750 246 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 SOX17Q9H6I2 414 aaPredicted RBP3.35□□□□□ -1.87
CPSF6-207ENST00000551516 OSGEPQ9NPF4 335 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 KCNQ5Q9NR82 932 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 FAM208AQ9UK61 1670 aaKnown RBP3.35□□□□□ -1.87
CPSF6-207ENST00000551516 MAP3K19Q56UN5 1328 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 ANKRD36BQ8N2N9 1353 aa3.35□□□□□ -1.87
CPSF6-207ENST00000551516 NHSQ6T4R5 1651 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 LINC01387J3KSC0 135 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 M0R082 166 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 FYB1O15117 783 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 GREM1O60565 184 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 BPNT1O95861 308 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 CYP11A1P05108 521 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 IL2RBP14784 551 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 GARTP22102 1010 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 HOXC9P31274 260 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 MCM4P33991 863 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 NASPP49321 788 aaPredicted RBP3.34□□□□□ -1.87
CPSF6-207ENST00000551516 AFF1P51825 1210 aaKnown RBP3.34□□□□□ -1.87
CPSF6-207ENST00000551516 PRELPP51888 382 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 GSTM4Q03013 218 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 APOBRQ0VD83 1088 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 C19orf57Q0VDD7 668 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 NFX1Q12986 1120 aaKnown RBP3.34□□□□□ -1.87
CPSF6-207ENST00000551516 MPP2Q14168 576 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 GRIK5Q16478 980 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 RNFT1Q5M7Z0 435 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 MSL1Q68DK7 614 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 SCARA3Q6AZY7 606 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 LLGL2Q6P1M3 1020 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 ADAMTSL4Q6UY14 1074 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 C20orf204Q6ZNR8 217 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 TOM1L2Q6ZVM7 507 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 CHSY3Q70JA7 882 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 WFDC8Q8IUA0 241 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 JMYQ8N9B5 988 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 ZNF417Q8TAU3 575 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 CPLX3Q8WVH0 158 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 GATAD2BQ8WXI9 593 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 KCNB2Q92953 911 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 ACDQ96AP0 544 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 ACSBG1Q96GR2 724 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 ZNF587Q96SQ5 575 aaPredicted RBP3.34□□□□□ -1.87
CPSF6-207ENST00000551516 DNAJC2Q99543 621 aaKnown RBP3.34□□□□□ -1.87
CPSF6-207ENST00000551516 CORO1BQ9BR76 489 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 STRIP2Q9ULQ0 834 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 EFR3BQ9Y2G0 817 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 STARD13Q9Y3M8 1113 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 PCDHB5Q9Y5E4 795 aa3.34□□□□□ -1.87
CPSF6-207ENST00000551516 A0A1W2PP64 1363 aa3.34□□□□□ -1.88
CPSF6-207ENST00000551516 CICQ96RK0 1608 aaPredicted RBP3.33□□□□□ -1.88
CPSF6-207ENST00000551516 TOGARAM1Q9Y4F4 1720 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 FSCN2O14926 492 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 OIP5O43482 229 aa3.33□□□□□ -1.88
CPSF6-207ENST00000551516 F13A1P00488 732 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms