RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 CABP5Q9NP86 173 aa14□□□□□ -0.17
PRPF40B-212ENST00000551111 MBD4O95243 580 aa13.99□□□□□ -0.17
PRPF40B-212ENST00000551111 COL6A1P12109 1028 aa13.99□□□□□ -0.17
PRPF40B-212ENST00000551111 AKR1B1P15121 316 aa13.99□□□□□ -0.17
PRPF40B-212ENST00000551111 PTPREP23469 700 aa13.99□□□□□ -0.17
PRPF40B-212ENST00000551111 ADD2P35612 726 aa13.99□□□□□ -0.17
PRPF40B-212ENST00000551111 USP14P54578 494 aa13.99□□□□□ -0.17
PRPF40B-212ENST00000551111 LBX2Q6XYB7 198 aa13.99□□□□□ -0.17
PRPF40B-212ENST00000551111 TRPV1Q8NER1 839 aa13.99□□□□□ -0.17
PRPF40B-212ENST00000551111 APBA2Q99767 749 aa13.99□□□□□ -0.17
PRPF40B-212ENST00000551111 PAG1Q9NWQ8 432 aa13.99□□□□□ -0.17
PRPF40B-212ENST00000551111 GREB1LQ9C091 1923 aaPredicted RBP13.98□□□□□ -0.17
PRPF40B-212ENST00000551111 MYH4Q9Y623 1939 aa13.98□□□□□ -0.17
PRPF40B-212ENST00000551111 IGHA2P01877 340 aa13.98□□□□□ -0.17
PRPF40B-212ENST00000551111 CAPN2P17655 700 aa13.98□□□□□ -0.17
PRPF40B-212ENST00000551111 ATP5JP18859 108 aa13.98□□□□□ -0.17
PRPF40B-212ENST00000551111 CYP2C19P33261 490 aa13.98□□□□□ -0.17
PRPF40B-212ENST00000551111 LRRC26Q2I0M4 334 aa13.98□□□□□ -0.17
PRPF40B-212ENST00000551111 GTF3C2Q8WUA4 911 aaPredicted RBP13.98□□□□□ -0.17
PRPF40B-212ENST00000551111 MOV10L1Q9BXT6 1211 aaKnown RBP13.98□□□□□ -0.17
PRPF40B-212ENST00000551111 DDX19BQ9UMR2 479 aa13.98□□□□□ -0.17
PRPF40B-212ENST00000551111 ZNF236Q9UL36 1845 aa13.97□□□□□ -0.17
PRPF40B-212ENST00000551111 MCM3APO60318 1980 aa13.97□□□□□ -0.17
PRPF40B-212ENST00000551111 SLC15A5A6NIM6 579 aa13.97□□□□□ -0.17
PRPF40B-212ENST00000551111 MAGEA10P43363 369 aaPredicted RBP13.97□□□□□ -0.17
PRPF40B-212ENST00000551111 GRB14Q14449 540 aa13.97□□□□□ -0.17
PRPF40B-212ENST00000551111 SPICE1Q8N0Z3 855 aa13.97□□□□□ -0.17
PRPF40B-212ENST00000551111 HAUS7Q99871 368 aa13.97□□□□□ -0.17
PRPF40B-212ENST00000551111 CWC22Q9HCG8 908 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-212ENST00000551111 USP17L12C9JPN9 530 aa13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 USP17L21D6R901 530 aa13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 COBLO75128 1261 aa13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 RAB11FIP3O75154 756 aa13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 HMMRO75330 724 aa13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 CDK8P49336 464 aa13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 COG2Q14746 738 aa13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 C12orf60Q5U649 245 aa13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 TMED8Q6PL24 325 aaPredicted RBP13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 TRMT44Q8IYL2 757 aaKnown RBP13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 TANGO6Q9C0B7 1094 aa13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 PUS7LQ9H0K6 701 aaKnown RBP13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 RCAN3Q9UKA8 241 aa13.96□□□□□ -0.17
PRPF40B-212ENST00000551111 LTBP2Q14767 1821 aa13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 HOXC6P09630 235 aa13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 MS4A1P11836 297 aa13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 BMP8BP34820 402 aa13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 CCNA1P78396 465 aa13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 ANO1Q5XXA6 986 aa13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 TSHZ3Q63HK5 1081 aa13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 SAMD1Q6SPF0 538 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 TMEM179Q6ZVK1 233 aa13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 ATG4CQ96DT6 458 aa13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 SPATC1LQ9H0A9 340 aa13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 FBXO28Q9NVF7 368 aa13.95□□□□□ -0.18
PRPF40B-212ENST00000551111 A0A1W2PPC1 479 aa13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 ERCC3P19447 782 aa13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 ADORA2AP29274 412 aa13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 CNGA1P29973 690 aa13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 DSG3P32926 999 aa13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 ATP2B2Q01814 1243 aa13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 PRAMEF19Q5SWL8 479 aa13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 MFSD14CQ5VZR4 134 aa13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 CTR9Q6PD62 1173 aa13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 ATP8A2Q9NTI2 1148 aa13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 TMX2Q9Y320 296 aa13.94□□□□□ -0.18
PRPF40B-212ENST00000551111 GLRX3O76003 335 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 CYBAP13498 195 aa13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 EEF2P13639 858 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 ATN1P54259 1190 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 MDM2Q00987 491 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 ICA1Q05084 483 aa13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 C16orf86Q6ZW13 317 aa13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 Q7L0L9 218 aa13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 STK11IPQ8N1F8 1099 aa13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 SENP6Q9GZR1 1112 aaPredicted RBP13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 VCPKMTQ9H867 229 aa13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 HOXC10Q9NYD6 342 aa13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 SWAP70Q9UH65 585 aa13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 DDX20Q9UHI6 824 aaKnown RBP13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 SLC4A4Q9Y6R1 1079 aa13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 IVNS1ABPQ9Y6Y0 642 aa13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 A0A0C4DFX4 3053 aa13.93□□□□□ -0.18
PRPF40B-212ENST00000551111 FLOT1O75955 427 aa13.92□□□□□ -0.18
PRPF40B-212ENST00000551111 PLS1Q14651 629 aa13.92□□□□□ -0.18
PRPF40B-212ENST00000551111 TMEM132BQ14DG7 1078 aa13.92□□□□□ -0.18
PRPF40B-212ENST00000551111 UBE3CQ15386 1083 aa13.92□□□□□ -0.18
PRPF40B-212ENST00000551111 DPP9Q86TI2 863 aa13.92□□□□□ -0.18
PRPF40B-212ENST00000551111 LRRCC1Q9C099 1032 aa13.92□□□□□ -0.18
PRPF40B-212ENST00000551111 GJC2Q5T442 439 aaPredicted RBP13.91□□□□□ -0.18
PRPF40B-212ENST00000551111 NCAPG2Q86XI2 1143 aa13.91□□□□□ -0.18
PRPF40B-212ENST00000551111 OSBP2Q969R2 916 aa13.91□□□□□ -0.18
PRPF40B-212ENST00000551111 STRBPQ96SI9 672 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-212ENST00000551111 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRPF40B-212ENST00000551111 GSG1L2A8MUP6 293 aa13.9□□□□□ -0.18
PRPF40B-212ENST00000551111 TDHQ8IZJ6 230 aa13.9□□□□□ -0.18
PRPF40B-212ENST00000551111 SHCBP1Q8NEM2 672 aa13.9□□□□□ -0.18
PRPF40B-212ENST00000551111 LPAR1Q92633 364 aa13.9□□□□□ -0.18
PRPF40B-212ENST00000551111 NUP88Q99567 741 aaPredicted RBP13.9□□□□□ -0.18
PRPF40B-212ENST00000551111 UBE2OQ9C0C9 1292 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms