RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ALPK3Q96L96 1907 aa16.11■□□□□ 0.17
NUP188-211ENST00000550219 A0A1W2PRG0 241 aa16.11■□□□□ 0.17
NUP188-211ENST00000550219 GLRX3O76003 335 aaKnown RBP16.11■□□□□ 0.17
NUP188-211ENST00000550219 AKR1B1P15121 316 aa16.11■□□□□ 0.17
NUP188-211ENST00000550219 CAPN2P17655 700 aa16.11■□□□□ 0.17
NUP188-211ENST00000550219 CCND3P30281 292 aaPredicted RBP16.11■□□□□ 0.17
NUP188-211ENST00000550219 CACNB2Q08289 660 aaPredicted RBP16.11■□□□□ 0.17
NUP188-211ENST00000550219 MAP2K5Q13163 448 aa16.11■□□□□ 0.17
NUP188-211ENST00000550219 MAP3K21Q5TCX8 1036 aa16.11■□□□□ 0.17
NUP188-211ENST00000550219 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
NUP188-211ENST00000550219 TMEM179Q6ZVK1 233 aa16.11■□□□□ 0.17
NUP188-211ENST00000550219 TRMT44Q8IYL2 757 aaKnown RBP16.11■□□□□ 0.17
NUP188-211ENST00000550219 ANKLE1Q8NAG6 615 aa16.11■□□□□ 0.17
NUP188-211ENST00000550219 SWAP70Q9UH65 585 aa16.11■□□□□ 0.17
NUP188-211ENST00000550219 IVNS1ABPQ9Y6Y0 642 aa16.11■□□□□ 0.17
NUP188-211ENST00000550219 MYH7P12883 1935 aa16.11■□□□□ 0.17
NUP188-211ENST00000550219 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
NUP188-211ENST00000550219 SMIM22K7EJ46 135 aa16.1■□□□□ 0.17
NUP188-211ENST00000550219 ICA1Q05084 483 aa16.1■□□□□ 0.17
NUP188-211ENST00000550219 USP6NLQ92738 828 aa16.1■□□□□ 0.17
NUP188-211ENST00000550219 DDRGK1Q96HY6 314 aa16.1■□□□□ 0.17
NUP188-211ENST00000550219 NBPF3Q9H094 633 aa16.1■□□□□ 0.17
NUP188-211ENST00000550219 C11orf49Q9H6J7 331 aa16.1■□□□□ 0.17
NUP188-211ENST00000550219 ARHGEF10LQ9HCE6 1279 aa16.1■□□□□ 0.17
NUP188-211ENST00000550219 ATP8A2Q9NTI2 1148 aa16.1■□□□□ 0.17
NUP188-211ENST00000550219 ZMYND8Q9ULU4 1186 aaPredicted RBP16.1■□□□□ 0.17
NUP188-211ENST00000550219 SLC4A4Q9Y6R1 1079 aa16.1■□□□□ 0.17
NUP188-211ENST00000550219 A0A0G2JMZ2 1700 aa16.1■□□□□ 0.17
NUP188-211ENST00000550219 PTPREP23469 700 aa16.09■□□□□ 0.17
NUP188-211ENST00000550219 ATP2B2Q01814 1243 aa16.09■□□□□ 0.17
NUP188-211ENST00000550219 TSHZ3Q63HK5 1081 aa16.09■□□□□ 0.17
NUP188-211ENST00000550219 SPICE1Q8N0Z3 855 aa16.09■□□□□ 0.17
NUP188-211ENST00000550219 LNPKQ9C0E8 428 aa16.09■□□□□ 0.17
NUP188-211ENST00000550219 OGDHLQ9ULD0 1010 aa16.09■□□□□ 0.17
NUP188-211ENST00000550219 SLC15A5A6NIM6 579 aa16.08■□□□□ 0.16
NUP188-211ENST00000550219 USP17L12C9JPN9 530 aa16.08■□□□□ 0.16
NUP188-211ENST00000550219 USP17L21D6R901 530 aa16.08■□□□□ 0.16
NUP188-211ENST00000550219 UBE3CQ15386 1083 aa16.08■□□□□ 0.16
NUP188-211ENST00000550219 KIAA1755Q5JYT7 1200 aa16.08■□□□□ 0.16
NUP188-211ENST00000550219 MFSD14CQ5VZR4 134 aa16.08■□□□□ 0.16
NUP188-211ENST00000550219 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
NUP188-211ENST00000550219 LBX2Q6XYB7 198 aa16.08■□□□□ 0.16
NUP188-211ENST00000550219 SH2D4AQ9H788 454 aa16.08■□□□□ 0.16
NUP188-211ENST00000550219 ZBTB47Q9UFB7 747 aaPredicted RBP16.08■□□□□ 0.16
NUP188-211ENST00000550219 SALL3Q9BXA9 1300 aa16.08■□□□□ 0.16
NUP188-211ENST00000550219 RAD21O60216 631 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 FLOT1O75955 427 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 SYN1P17600 705 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 PDE4AP27815 886 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 CNGA1P29973 690 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 CDK8P49336 464 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
NUP188-211ENST00000550219 GRB14Q14449 540 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 PLS1Q14651 629 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 COG2Q14746 738 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 C12orf60Q5U649 245 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 STK11IPQ8N1F8 1099 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 MOV10L1Q9BXT6 1211 aaKnown RBP16.07■□□□□ 0.16
NUP188-211ENST00000550219 PUS7LQ9H0K6 701 aaKnown RBP16.07■□□□□ 0.16
NUP188-211ENST00000550219 ECHDC1Q9NTX5 307 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 FLRT1Q9NZU1 646 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 STAP2Q9UGK3 403 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 FRMPD3Q5JV73 1810 aa16.07■□□□□ 0.16
NUP188-211ENST00000550219 PFASO15067 1338 aa16.06■□□□□ 0.16
NUP188-211ENST00000550219 C16orf86Q6ZW13 317 aa16.06■□□□□ 0.16
NUP188-211ENST00000550219 NPLOC4Q8TAT6 608 aa16.06■□□□□ 0.16
NUP188-211ENST00000550219 ATG4CQ96DT6 458 aa16.06■□□□□ 0.16
NUP188-211ENST00000550219 SPATC1LQ9H0A9 340 aa16.06■□□□□ 0.16
NUP188-211ENST00000550219 PRO3102Q9H379 93 aa16.06■□□□□ 0.16
NUP188-211ENST00000550219 VCPKMTQ9H867 229 aa16.06■□□□□ 0.16
NUP188-211ENST00000550219 ZNF236Q9UL36 1845 aa16.05■□□□□ 0.16
NUP188-211ENST00000550219 CYP2C19P33261 490 aa16.05■□□□□ 0.16
NUP188-211ENST00000550219 CTR9Q6PD62 1173 aa16.05■□□□□ 0.16
NUP188-211ENST00000550219 DPP9Q86TI2 863 aa16.05■□□□□ 0.16
NUP188-211ENST00000550219 OTUD7AQ8TE49 926 aaPredicted RBP16.05■□□□□ 0.16
NUP188-211ENST00000550219 LPAR1Q92633 364 aa16.05■□□□□ 0.16
NUP188-211ENST00000550219 CCDC17Q96LX7 622 aa16.05■□□□□ 0.16
NUP188-211ENST00000550219 HOXC10Q9NYD6 342 aa16.05■□□□□ 0.16
NUP188-211ENST00000550219 ARPP21Q9UBL0 812 aaPredicted RBP16.05■□□□□ 0.16
NUP188-211ENST00000550219 TMX2Q9Y320 296 aa16.05■□□□□ 0.16
NUP188-211ENST00000550219 WDR46O15213 610 aaKnown RBP16.04■□□□□ 0.16
NUP188-211ENST00000550219 EEF2P13639 858 aaKnown RBP16.04■□□□□ 0.16
NUP188-211ENST00000550219 ERCC3P19447 782 aa16.04■□□□□ 0.16
NUP188-211ENST00000550219 ADORA2AP29274 412 aa16.04■□□□□ 0.16
NUP188-211ENST00000550219 NCAPG2Q86XI2 1143 aa16.04■□□□□ 0.16
NUP188-211ENST00000550219 PLEKHM2Q8IWE5 1019 aa16.04■□□□□ 0.16
NUP188-211ENST00000550219 CEP290O15078 2479 aa16.03■□□□□ 0.16
NUP188-211ENST00000550219 DSG3P32926 999 aa16.03■□□□□ 0.16
NUP188-211ENST00000550219 LHX8Q68G74 356 aa16.03■□□□□ 0.16
NUP188-211ENST00000550219 SIAH1Q8IUQ4 282 aa16.03■□□□□ 0.16
NUP188-211ENST00000550219 KBTBD3Q8NAB2 608 aa16.03■□□□□ 0.16
NUP188-211ENST00000550219 OSBPL3Q9H4L5 887 aa16.03■□□□□ 0.16
NUP188-211ENST00000550219 DDX20Q9UHI6 824 aaKnown RBP16.03■□□□□ 0.16
NUP188-211ENST00000550219 RLFQ13129 1914 aa16.03■□□□□ 0.16
NUP188-211ENST00000550219 TRIOBPQ9H2D6 2365 aa16.02■□□□□ 0.16
NUP188-211ENST00000550219 TTC41PQ6P2S7 1318 aa16.02■□□□□ 0.16
NUP188-211ENST00000550219 MINDY4BA8MYZ0 360 aa16.02■□□□□ 0.16
NUP188-211ENST00000550219 HOXC6P09630 235 aa16.02■□□□□ 0.16
NUP188-211ENST00000550219 MX1P20591 662 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms