RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 ICA1Q05084 483 aa14.12□□□□□ -0.15
LETMD1-221ENST00000550100 GPRC5AQ8NFJ5 357 aa14.12□□□□□ -0.15
LETMD1-221ENST00000550100 NKX2-3Q8TAU0 364 aa14.12□□□□□ -0.15
LETMD1-221ENST00000550100 DDRGK1Q96HY6 314 aa14.12□□□□□ -0.15
LETMD1-221ENST00000550100 PAGR1Q9BTK6 254 aa14.12□□□□□ -0.15
LETMD1-221ENST00000550100 TAOK2Q9UL54 1235 aa14.12□□□□□ -0.15
LETMD1-221ENST00000550100 IGKV6D-41A0A0C4DH26 115 aa14.11□□□□□ -0.15
LETMD1-221ENST00000550100 TRIM6-TRIM34B2RNG4 842 aa14.11□□□□□ -0.15
LETMD1-221ENST00000550100 ADCY3O60266 1144 aa14.11□□□□□ -0.15
LETMD1-221ENST00000550100 CTDSPL2Q05D32 466 aa14.11□□□□□ -0.15
LETMD1-221ENST00000550100 TRIM32Q13049 653 aa14.11□□□□□ -0.15
LETMD1-221ENST00000550100 AMOTL1Q8IY63 956 aa14.11□□□□□ -0.15
LETMD1-221ENST00000550100 RILPL2Q969X0 211 aa14.11□□□□□ -0.15
LETMD1-221ENST00000550100 ATP2B2Q01814 1243 aa14.1□□□□□ -0.15
LETMD1-221ENST00000550100 PPARAQ07869 468 aa14.1□□□□□ -0.15
LETMD1-221ENST00000550100 LRRFIP1Q32MZ4 808 aaKnown RBP14.1□□□□□ -0.15
LETMD1-221ENST00000550100 FAM47AQ5JRC9 791 aa14.1□□□□□ -0.15
LETMD1-221ENST00000550100 NBPF11Q86T75 865 aa14.1□□□□□ -0.15
LETMD1-221ENST00000550100 VCPKMTQ9H867 229 aa14.1□□□□□ -0.15
LETMD1-221ENST00000550100 KANSL2Q9H9L4 492 aa14.1□□□□□ -0.15
LETMD1-221ENST00000550100 MKNK2Q9HBH9 465 aa14.1□□□□□ -0.15
LETMD1-221ENST00000550100 HELLSQ9NRZ9 838 aa14.1□□□□□ -0.15
LETMD1-221ENST00000550100 FBXO28Q9NVF7 368 aa14.1□□□□□ -0.15
LETMD1-221ENST00000550100 SDSP20132 328 aa14.09□□□□□ -0.15
LETMD1-221ENST00000550100 IRF5Q13568 498 aa14.09□□□□□ -0.15
LETMD1-221ENST00000550100 MCMDC2Q4G0Z9 681 aa14.09□□□□□ -0.15
LETMD1-221ENST00000550100 LBX2Q6XYB7 198 aa14.09□□□□□ -0.15
LETMD1-221ENST00000550100 USP6NLQ92738 828 aa14.09□□□□□ -0.15
LETMD1-221ENST00000550100 COA7Q96BR5 231 aa14.09□□□□□ -0.15
LETMD1-221ENST00000550100 SHISA4Q96DD7 197 aa14.09□□□□□ -0.15
LETMD1-221ENST00000550100 NUP88Q99567 741 aaPredicted RBP14.09□□□□□ -0.15
LETMD1-221ENST00000550100 UNC93B1Q9H1C4 597 aa14.09□□□□□ -0.15
LETMD1-221ENST00000550100 IL25Q9H293 177 aa14.09□□□□□ -0.15
LETMD1-221ENST00000550100 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.09□□□□□ -0.15
LETMD1-221ENST00000550100 RABGAP1Q9Y3P9 1069 aa14.09□□□□□ -0.15
LETMD1-221ENST00000550100 RBBP6Q7Z6E9 1792 aaKnown RBP14.09□□□□□ -0.15
LETMD1-221ENST00000550100 FGAP02671 866 aa14.08□□□□□ -0.16
LETMD1-221ENST00000550100 CCL5P13501 91 aa14.08□□□□□ -0.16
LETMD1-221ENST00000550100 GSPT1P15170 499 aaKnown RBP14.08□□□□□ -0.16
LETMD1-221ENST00000550100 COG2Q14746 738 aa14.08□□□□□ -0.16
LETMD1-221ENST00000550100 TANGO6Q9C0B7 1094 aa14.08□□□□□ -0.16
LETMD1-221ENST00000550100 NBPF3Q9H094 633 aa14.08□□□□□ -0.16
LETMD1-221ENST00000550100 NAPBQ9H115 298 aa14.08□□□□□ -0.16
LETMD1-221ENST00000550100 ARHGEF10LQ9HCE6 1279 aa14.08□□□□□ -0.16
LETMD1-221ENST00000550100 PARP14Q460N5 1801 aa14.08□□□□□ -0.16
LETMD1-221ENST00000550100 INHAP05111 366 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 HSPD1P10809 573 aaKnown RBP14.07□□□□□ -0.16
LETMD1-221ENST00000550100 CYP2B6P20813 491 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 DSG3P32926 999 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 ALX1Q15699 326 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 MORN1Q5T089 497 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 GPR142Q7Z601 462 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 SKAP1Q86WV1 359 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 SLAIN1Q8ND83 568 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 ATG4CQ96DT6 458 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 CEP95Q96GE4 821 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 NACAP1Q9BZK3 213 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 CLIP2Q9UDT6 1046 aa14.07□□□□□ -0.16
LETMD1-221ENST00000550100 NMT2O60551 498 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 TFAP4Q01664 338 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 CCL14Q16627 93 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 FAM83BQ5T0W9 1011 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 ZNF444Q8N0Y2 327 aaPredicted RBP14.06□□□□□ -0.16
LETMD1-221ENST00000550100 NEDD1Q8NHV4 660 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 PXYLP1Q8TE99 480 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 TRIB2Q92519 343 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 TMEM106CQ9BVX2 250 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 MOV10L1Q9BXT6 1211 aaKnown RBP14.06□□□□□ -0.16
LETMD1-221ENST00000550100 IL17RBQ9NRM6 502 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 MTMR4Q9NYA4 1195 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 NYAP2Q9P242 653 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 BIN2Q9UBW5 565 aaPredicted RBP14.06□□□□□ -0.16
LETMD1-221ENST00000550100 ADAMTS5Q9UNA0 930 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 F5H6K3 240 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 FLOT1O75955 427 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 NDUFB10O96000 172 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 KLRC3Q07444 240 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
LETMD1-221ENST00000550100 PLEKHH3Q7Z736 793 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 LPAR1Q92633 364 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 MKL1Q969V6 931 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 CHMP4CQ96CF2 233 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 RNF208Q9H0X6 261 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 HOXC10Q9NYD6 342 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 FLRT1Q9NZU1 646 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 ANAPC4Q9UJX5 808 aa14.06□□□□□ -0.16
LETMD1-221ENST00000550100 MYH4Q9Y623 1939 aa14.05□□□□□ -0.16
LETMD1-221ENST00000550100 CCDC171Q6TFL3 1326 aa14.05□□□□□ -0.16
LETMD1-221ENST00000550100 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
LETMD1-221ENST00000550100 FGRP09769 529 aa14.05□□□□□ -0.16
LETMD1-221ENST00000550100 MAPK4P31152 587 aa14.05□□□□□ -0.16
LETMD1-221ENST00000550100 HAND2P61296 217 aa14.05□□□□□ -0.16
LETMD1-221ENST00000550100 TMEM132BQ14DG7 1078 aa14.05□□□□□ -0.16
LETMD1-221ENST00000550100 CWC27Q6UX04 472 aaKnown RBP14.05□□□□□ -0.16
LETMD1-221ENST00000550100 RASGRP2Q7LDG7 609 aa14.05□□□□□ -0.16
LETMD1-221ENST00000550100 TICAM2Q86XR7 235 aa14.05□□□□□ -0.16
LETMD1-221ENST00000550100 LRRC47Q8N1G4 583 aaKnown RBP14.05□□□□□ -0.16
LETMD1-221ENST00000550100 GTF3C2Q8WUA4 911 aaPredicted RBP14.05□□□□□ -0.16
LETMD1-221ENST00000550100 A0A0G2JMZ2 1700 aa14.04□□□□□ -0.16
LETMD1-221ENST00000550100 COL11A1P12107 1806 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms