RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 NKX2-3Q8TAU0 364 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 CLMNQ96JQ2 1002 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 DNAAF2Q9NVR5 837 aaKnown RBP5.36□□□□□ -1.55
CNGA1-209ENST00000544810 RRP7AQ9Y3A4 280 aaKnown RBP5.36□□□□□ -1.55
CNGA1-209ENST00000544810 DNMT3AQ9Y6K1 912 aaPredicted RBP5.36□□□□□ -1.55
CNGA1-209ENST00000544810 COL3A1P02461 1466 aaPredicted RBP5.36□□□□□ -1.55
CNGA1-209ENST00000544810 ELP1O95163 1332 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 RPTORQ8N122 1335 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 NUP98P52948 1817 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 EPB41L2O43491 1005 aaKnown RBP5.36□□□□□ -1.55
CNGA1-209ENST00000544810 TNNT1P13805 278 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 H2AFXP16104 143 aaPredicted RBP5.36□□□□□ -1.55
CNGA1-209ENST00000544810 BMP8BP34820 402 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 GJA8P48165 433 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 GTF2A1P52655 376 aaPredicted RBP5.36□□□□□ -1.55
CNGA1-209ENST00000544810 MTFR1Q15390 333 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 GIMAP6Q6P9H5 292 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 CASC1Q6TDU7 716 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 C17orf53Q8N3J3 647 aaPredicted RBP5.36□□□□□ -1.55
CNGA1-209ENST00000544810 ARHGAP45Q92619 1136 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 CFAP53Q96M91 514 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 PTPN18Q99952 460 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 ZC3H12CQ9C0D7 883 aaKnown RBP5.36□□□□□ -1.55
CNGA1-209ENST00000544810 SMC4Q9NTJ3 1288 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 PSD3Q9NYI0 1048 aa5.36□□□□□ -1.55
CNGA1-209ENST00000544810 LAMB1P07942 1786 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 ANKRD36CQ5JPF3 1778 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 RPAP1Q9BWH6 1393 aaPredicted RBP5.35□□□□□ -1.55
CNGA1-209ENST00000544810 MKI67P46013 3256 aaKnown RBP5.35□□□□□ -1.55
CNGA1-209ENST00000544810 FARP2O94887 1054 aaPredicted RBP5.35□□□□□ -1.55
CNGA1-209ENST00000544810 MYL6BP14649 208 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 CDC25BP30305 580 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 UBE2HP62256 183 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 GPS2Q13227 327 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 LRIT3Q3SXY7 679 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 ZGPATQ8N5A5 531 aaKnown RBP5.35□□□□□ -1.55
CNGA1-209ENST00000544810 CELF1Q92879 486 aaKnown RBP5.35□□□□□ -1.55
CNGA1-209ENST00000544810 SPATA32Q96LK8 384 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 GDF15Q99988 308 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 HINFPQ9BQA5 517 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 RSPH14Q9UHP6 348 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 FZD1Q9UP38 647 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 SSC5DA1L4H1 1573 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 CEP290O15078 2479 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 COL1A1P02452 1464 aaPredicted RBP5.35□□□□□ -1.55
CNGA1-209ENST00000544810 LAMB2P55268 1798 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 SCN9AQ15858 1988 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 SH3TC1Q8TE82 1336 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 WNT10BO00744 389 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 KIF1CO43896 1103 aaKnown RBP5.35□□□□□ -1.55
CNGA1-209ENST00000544810 ICMTO60725 284 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 GJB1P08034 283 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 ANAPC15P60006 121 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 SWI5Q1ZZU3 235 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 EML3Q32P44 896 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 TTC22Q5TAA0 569 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 MCM10Q7L590 875 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 RPAINQ86UA6 219 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 NLRP10Q86W26 655 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 APOBEC3FQ8IUX4 373 aaKnown RBP5.35□□□□□ -1.55
CNGA1-209ENST00000544810 TMEM57Q8N5G2 664 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 TPCN2Q8NHX9 752 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 PHACTR3Q96KR7 559 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 RAPGEFL1Q9UHV5 662 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 COL4A1P02462 1669 aa5.35□□□□□ -1.55
CNGA1-209ENST00000544810 PTPRCP08575 1304 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 U2SURPO15042 1029 aaKnown RBP5.34□□□□□ -1.55
CNGA1-209ENST00000544810 SASH1O94885 1247 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 PRMT2P55345 433 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 ARHGAP4P98171 946 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 ECM1Q16610 540 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 CDAN1Q8IWY9 1227 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 UBXN6Q9BZV1 441 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 ARHGAP39Q9C0H5 1083 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 CXXC1Q9P0U4 656 aaPredicted RBP5.34□□□□□ -1.55
CNGA1-209ENST00000544810 ZNF646O15015 1829 aaPredicted RBP5.34□□□□□ -1.55
CNGA1-209ENST00000544810 SZT2Q5T011 3432 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 TCHHQ07283 1943 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 ERICH4A6NGS2 130 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 MYO1CO00159 1063 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 UFL1O94874 794 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 APPP05067 770 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 MORN1Q5T089 497 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 ANKRD45Q5TZF3 282 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 CEP135Q66GS9 1140 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 FBXO38Q6PIJ6 1188 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 PHTF2Q8N3S3 785 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 SSH1Q8WYL5 1049 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 ZFYVE28Q9HCC9 887 aa5.34□□□□□ -1.55
CNGA1-209ENST00000544810 DKK1O94907 266 aa5.33□□□□□ -1.56
CNGA1-209ENST00000544810 SLU7O95391 586 aaKnown RBP5.33□□□□□ -1.56
CNGA1-209ENST00000544810 CAVIN2O95810 425 aa5.33□□□□□ -1.56
CNGA1-209ENST00000544810 F12P00748 615 aaPredicted RBP5.33□□□□□ -1.56
CNGA1-209ENST00000544810 GNRH1P01148 92 aa5.33□□□□□ -1.56
CNGA1-209ENST00000544810 CCL5P13501 91 aa5.33□□□□□ -1.56
CNGA1-209ENST00000544810 GSPT1P15170 499 aaKnown RBP5.33□□□□□ -1.56
CNGA1-209ENST00000544810 PRKAR2BP31323 418 aa5.33□□□□□ -1.56
CNGA1-209ENST00000544810 BCAMP50895 628 aa5.33□□□□□ -1.56
CNGA1-209ENST00000544810 HDLBPQ00341 1268 aaKnown RBP5.33□□□□□ -1.56
CNGA1-209ENST00000544810 LMOD3Q0VAK6 560 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms