RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 CYP2C19P33261 490 aa19.6■□□□□ 0.73
DDX55-212ENST00000544738 SHROOM1Q2M3G4 852 aaPredicted RBP19.6■□□□□ 0.73
DDX55-212ENST00000544738 RIOK1Q9BRS2 568 aaKnown RBP19.6■□□□□ 0.73
DDX55-212ENST00000544738 LRRCC1Q9C099 1032 aa19.6■□□□□ 0.73
DDX55-212ENST00000544738 SERPINB13Q9UIV8 391 aa19.6■□□□□ 0.73
DDX55-212ENST00000544738 GDF11O95390 407 aa19.59■□□□□ 0.73
DDX55-212ENST00000544738 ATP5JP18859 108 aa19.59■□□□□ 0.73
DDX55-212ENST00000544738 CCNA1P78396 465 aa19.59■□□□□ 0.73
DDX55-212ENST00000544738 USP38Q8NB14 1042 aa19.59■□□□□ 0.73
DDX55-212ENST00000544738 ARRDC4Q8NCT1 418 aa19.59■□□□□ 0.73
DDX55-212ENST00000544738 CRNKL1Q9BZJ0 848 aaKnown RBP19.59■□□□□ 0.73
DDX55-212ENST00000544738 ZBTB21Q9ULJ3 1066 aa19.59■□□□□ 0.73
DDX55-212ENST00000544738 TRIM60Q495X7 471 aa19.58■□□□□ 0.72
DDX55-212ENST00000544738 ANO1Q5XXA6 986 aa19.58■□□□□ 0.72
DDX55-212ENST00000544738 TATDN1Q6P1N9 297 aa19.58■□□□□ 0.72
DDX55-212ENST00000544738 SH3RF1Q7Z6J0 888 aa19.58■□□□□ 0.72
DDX55-212ENST00000544738 TRPV1Q8NER1 839 aa19.58■□□□□ 0.72
DDX55-212ENST00000544738 EMILIN3Q9NT22 766 aa19.58■□□□□ 0.72
DDX55-212ENST00000544738 PAG1Q9NWQ8 432 aa19.58■□□□□ 0.72
DDX55-212ENST00000544738 RABGAP1Q9Y3P9 1069 aa19.58■□□□□ 0.72
DDX55-212ENST00000544738 ZNF532Q9HCE3 1301 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 MYH1P12882 1939 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 TMEM265A0A087WTH1 108 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 TRIM43BA6NCK2 446 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 SLC15A5A6NIM6 579 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 KBTBD13C9JR72 458 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 PTPREP23469 700 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 GRIN2CQ14957 1233 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 USP17L2Q6R6M4 530 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 NPLOC4Q8TAT6 608 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 PPM1EQ8WY54 764 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 TRIM43Q96BQ3 446 aaPredicted RBP19.57■□□□□ 0.72
DDX55-212ENST00000544738 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.57■□□□□ 0.728e-8■■■□□ 15.3
DDX55-212ENST00000544738 BOLA2Q9H3K6 86 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 IVNS1ABPQ9Y6Y0 642 aa19.57■□□□□ 0.72
DDX55-212ENST00000544738 CNMDO75829 334 aa19.56■□□□□ 0.72
DDX55-212ENST00000544738 POLR3DP05423 398 aaPredicted RBP19.56■□□□□ 0.72
DDX55-212ENST00000544738 ZYXQ15942 572 aaKnown RBP19.56■□□□□ 0.72
DDX55-212ENST00000544738 FERMT2Q96AC1 680 aa19.56■□□□□ 0.72
DDX55-212ENST00000544738 RNPC3Q96LT9 517 aaKnown RBP19.56■□□□□ 0.72
DDX55-212ENST00000544738 HAUS7Q99871 368 aa19.56■□□□□ 0.72
DDX55-212ENST00000544738 PDLIM7Q9NR12 457 aa19.56■□□□□ 0.72
DDX55-212ENST00000544738 TCRBV5S4A2TA0A5A2 114 aa19.55■□□□□ 0.72
DDX55-212ENST00000544738 GH2P01242 217 aa19.55■□□□□ 0.72
DDX55-212ENST00000544738 ADCYAP1R1P41586 468 aa19.55■□□□□ 0.72
DDX55-212ENST00000544738 CERKLQ49MI3 558 aaPredicted RBP19.55■□□□□ 0.72
DDX55-212ENST00000544738 FAM122AQ96E09 287 aa19.55■□□□□ 0.72
DDX55-212ENST00000544738 CABP5Q9NP86 173 aa19.55■□□□□ 0.72
DDX55-212ENST00000544738 USP17L15C9J2P7 530 aa19.54■□□□□ 0.72
DDX55-212ENST00000544738 USP17L13C9JLJ4 530 aa19.54■□□□□ 0.72
DDX55-212ENST00000544738 USP17L11C9JVI0 530 aa19.54■□□□□ 0.72
DDX55-212ENST00000544738 USP17L18D6R9N7 530 aa19.54■□□□□ 0.72
DDX55-212ENST00000544738 USP17L22D6RA61 530 aa19.54■□□□□ 0.72
DDX55-212ENST00000544738 USP17L17D6RBQ6 530 aa19.54■□□□□ 0.72
DDX55-212ENST00000544738 USP17L19D6RCP7 530 aa19.54■□□□□ 0.72
DDX55-212ENST00000544738 USP17L20D6RJB6 530 aa19.54■□□□□ 0.72
DDX55-212ENST00000544738 USP17L24Q0WX57 530 aa19.54■□□□□ 0.72
DDX55-212ENST00000544738 MCM9Q9NXL9 1143 aa19.54■□□□□ 0.72
DDX55-212ENST00000544738 HOXC6P09630 235 aa19.53■□□□□ 0.72
DDX55-212ENST00000544738 ADD2P35612 726 aa19.53■□□□□ 0.72
DDX55-212ENST00000544738 PLA2G5P39877 138 aa19.53■□□□□ 0.72
DDX55-212ENST00000544738 PLCD1P51178 756 aa19.53■□□□□ 0.72
DDX55-212ENST00000544738 ABCB5Q2M3G0 1257 aa19.53■□□□□ 0.72
DDX55-212ENST00000544738 ZSCAN25Q6NSZ9 544 aa19.53■□□□□ 0.72
DDX55-212ENST00000544738 DPP9Q86TI2 863 aa19.53■□□□□ 0.72
DDX55-212ENST00000544738 DCTPP1Q9H773 170 aa19.53■□□□□ 0.72
DDX55-212ENST00000544738 CYBAP13498 195 aa19.52■□□□□ 0.72
DDX55-212ENST00000544738 USP14P54578 494 aa19.52■□□□□ 0.72
DDX55-212ENST00000544738 EPHB4P54760 987 aa19.52■□□□□ 0.72
DDX55-212ENST00000544738 TLE2Q04725 743 aa19.52■□□□□ 0.72
DDX55-212ENST00000544738 GRB14Q14449 540 aa19.52■□□□□ 0.72
DDX55-212ENST00000544738 RAB3GAP1Q15042 981 aa19.52■□□□□ 0.72
DDX55-212ENST00000544738 LCORLQ8N3X6 602 aa19.52■□□□□ 0.72
DDX55-212ENST00000544738 FEZ1Q99689 392 aa19.52■□□□□ 0.72
DDX55-212ENST00000544738 DCP1AQ9NPI6 582 aaPredicted RBP19.52■□□□□ 0.72
DDX55-212ENST00000544738 ECHDC1Q9NTX5 307 aa19.52■□□□□ 0.72
DDX55-212ENST00000544738 LTBP2Q14767 1821 aa19.51■□□□□ 0.71
DDX55-212ENST00000544738 SMARCA5O60264 1052 aaPredicted RBP19.51■□□□□ 0.71
DDX55-212ENST00000544738 ITGB8P26012 769 aa19.51■□□□□ 0.71
DDX55-212ENST00000544738 SHMT1P34896 483 aa19.51■□□□□ 0.71
DDX55-212ENST00000544738 GABPAQ06546 454 aa19.51■□□□□ 0.71
DDX55-212ENST00000544738 UBE3CQ15386 1083 aa19.51■□□□□ 0.71
DDX55-212ENST00000544738 CATSPERGQ6ZRH7 1159 aa19.51■□□□□ 0.71
DDX55-212ENST00000544738 GPATCH3Q96I76 525 aa19.51■□□□□ 0.71
DDX55-212ENST00000544738 C12orf42Q96LP6 360 aa19.51■□□□□ 0.71
DDX55-212ENST00000544738 ATP8A2Q9NTI2 1148 aa19.51■□□□□ 0.71
DDX55-212ENST00000544738 BTBD7Q9P203 1132 aa19.51■□□□□ 0.71
DDX55-212ENST00000544738 TACC3Q9Y6A5 838 aa19.51■□□□□ 0.71
DDX55-212ENST00000544738 NCOR1O75376 2440 aa19.5■□□□□ 0.71
DDX55-212ENST00000544738 DNAJB2P25686 324 aa19.5■□□□□ 0.71
DDX55-212ENST00000544738 SNX17Q15036 470 aa19.5■□□□□ 0.71
DDX55-212ENST00000544738 PRAMEF19Q5SWL8 479 aa19.5■□□□□ 0.71
DDX55-212ENST00000544738 SDR42E1Q8WUS8 393 aa19.5■□□□□ 0.71
DDX55-212ENST00000544738 DDRGK1Q96HY6 314 aa19.5■□□□□ 0.71
DDX55-212ENST00000544738 KIAA1683Q9H0B3 1180 aa19.5■□□□□ 0.71
DDX55-212ENST00000544738 ZNF576Q9H609 170 aa19.5■□□□□ 0.71
DDX55-212ENST00000544738 ARMT1Q9H993 441 aa19.5■□□□□ 0.71
DDX55-212ENST00000544738 FRMPD3Q5JV73 1810 aa19.49■□□□□ 0.71
DDX55-212ENST00000544738 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.49■□□□□ 0.71
DDX55-212ENST00000544738 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms