RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 USP17L1Q7RTZ2 530 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 FBXL16Q8N461 479 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 NECAB1Q8N987 351 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 SH3RF3Q8TEJ3 882 aaPredicted RBP11.79□□□□□ -0.52
MDH1-216ENST00000544381 CHMP4CQ96CF2 233 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 AGXT2Q9BYV1 514 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 ARPP21Q9UBL0 812 aaPredicted RBP11.79□□□□□ -0.52
MDH1-216ENST00000544381 CNOT7Q9UIV1 285 aaKnown RBP11.79□□□□□ -0.52
MDH1-216ENST00000544381 NAP1L2Q9ULW6 460 aaPredicted RBP11.79□□□□□ -0.52
MDH1-216ENST00000544381 TTF2Q9UNY4 1162 aaKnown RBP11.79□□□□□ -0.52
MDH1-216ENST00000544381 NEDD4P46934 1319 aa11.79□□□□□ -0.52
MDH1-216ENST00000544381 GAKO14976 1311 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 PCP11498 1178 aaKnown RBP11.78□□□□□ -0.52
MDH1-216ENST00000544381 APOBRQ0VD83 1088 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 NOGQ13253 232 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 RAB3GAP1Q15042 981 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 SBK1Q52WX2 424 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 USP48Q86UV5 1035 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 TEX11Q8IYF3 940 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 STK11IPQ8N1F8 1099 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 CERS5Q8N5B7 392 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 TMEM87BQ96K49 555 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 KCNQ5Q9NR82 932 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 MCM9Q9NXL9 1143 aa11.78□□□□□ -0.52
MDH1-216ENST00000544381 CENPFP49454 3210 aa11.77□□□□□ -0.52
MDH1-216ENST00000544381 ASTN2O75129 1339 aaPredicted RBP11.77□□□□□ -0.53
MDH1-216ENST00000544381 ADM5C9JUS6 153 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 PSMD14O00487 310 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 PFKFB2O60825 505 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 KDM4AO75164 1064 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 HUNKP57058 714 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 ANTXR2P58335 489 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 COPS2P61201 443 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 SART3Q15020 963 aaKnown RBP11.77□□□□□ -0.53
MDH1-216ENST00000544381 NFKBIBQ15653 356 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 HHIPL2Q6UWX4 724 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 CYB5R4Q7L1T6 521 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 TGFBRAP1Q8WUH2 860 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 ZNF516Q92618 1163 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 ESR2Q92731 530 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 TEKT1Q969V4 418 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 ZNF274Q96GC6 653 aaPredicted RBP11.77□□□□□ -0.53
MDH1-216ENST00000544381 MXD3Q9BW11 206 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 INCENPQ9NQS7 918 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 DAGLAQ9Y4D2 1042 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 BRCA2P51587 3418 aa11.77□□□□□ -0.53
MDH1-216ENST00000544381 CYP2D7A0A087X1C5 515 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 ERICH2A1L162 156 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 POLR3DP05423 398 aaPredicted RBP11.76□□□□□ -0.53
MDH1-216ENST00000544381 USP17L8P0C7I0 530 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 GJB2P29033 226 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 SOX10P56693 466 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 PDE4BQ07343 736 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 TMEM67Q5HYA8 995 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 DACT2Q5SW24 774 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 DPF2Q92785 391 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 TNPO1Q92973 898 aaKnown RBP11.76□□□□□ -0.53
MDH1-216ENST00000544381 GTF3C6Q969F1 213 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 MTA3Q9BTC8 594 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 ZSWIM5Q9P217 1185 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 ANGEL1Q9UNK9 670 aaKnown RBP11.76□□□□□ -0.53
MDH1-216ENST00000544381 LAMB1P07942 1786 aa11.76□□□□□ -0.53
MDH1-216ENST00000544381 NAV1Q8NEY1 1877 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 KLF18A0A0U1RQI7 1052 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 SH2B2O14492 632 aaPredicted RBP11.75□□□□□ -0.53
MDH1-216ENST00000544381 IFIT3O14879 490 aaKnown RBP11.75□□□□□ -0.53
MDH1-216ENST00000544381 PDIA3P30101 505 aaKnown RBP11.75□□□□□ -0.53
MDH1-216ENST00000544381 EVCP57679 992 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 HDLBPQ00341 1268 aaKnown RBP11.75□□□□□ -0.53
MDH1-216ENST00000544381 KIF23Q02241 960 aaPredicted RBP11.75□□□□□ -0.53
MDH1-216ENST00000544381 ST3GAL1Q11201 340 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 TNIP1Q15025 636 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 KMT5BQ4FZB7 885 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 TBC1D10BQ4KMP7 808 aaPredicted RBP11.75□□□□□ -0.53
MDH1-216ENST00000544381 C12orf60Q5U649 245 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 RGMBQ6NW40 437 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 NFXL1Q6ZNB6 911 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 KIAA0825Q8IV33 1275 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 MAPKAPK5Q8IW41 473 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 GBP4Q96PP9 640 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 LLPHQ9BRT6 129 aaKnown RBP11.75□□□□□ -0.53
MDH1-216ENST00000544381 UBAC1Q9BSL1 405 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 GBA2Q9HCG7 927 aaPredicted RBP11.75□□□□□ -0.53
MDH1-216ENST00000544381 RNF186Q9NXI6 227 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 SAGE1Q9NXZ1 904 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 PCDHB3Q9Y5E6 796 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 TACC3Q9Y6A5 838 aa11.75□□□□□ -0.53
MDH1-216ENST00000544381 CCDC69A6NI79 296 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 GOLGA8BA8MQT2 603 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 DHX16O60231 1041 aaKnown RBP11.74□□□□□ -0.53
MDH1-216ENST00000544381 RANBP6O60518 1105 aaKnown RBP11.74□□□□□ -0.53
MDH1-216ENST00000544381 CFHP08603 1231 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 SLC10A3P09131 477 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 FGRP09769 529 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 CYP2D6P10635 497 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 PDIA4P13667 645 aaKnown RBP11.74□□□□□ -0.53
MDH1-216ENST00000544381 CRKP46108 304 aa11.74□□□□□ -0.53
MDH1-216ENST00000544381 RBM5P52756 815 aaKnown RBP eCLIP11.74□□□□□ -0.53
MDH1-216ENST00000544381 RHBDL3P58872 404 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms