RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 RFC4P35249 363 aa20.21■□□□□ 0.83
SCARB1-208ENST00000544327 SYMPKQ92797 1274 aaKnown RBP20.21■□□□□ 0.83
SCARB1-208ENST00000544327 PPP1R13BQ96KQ4 1090 aa20.21■□□□□ 0.83
SCARB1-208ENST00000544327 PYM1Q9BRP8 204 aaKnown RBP20.21■□□□□ 0.83
SCARB1-208ENST00000544327 TRMT1Q9NXH9 659 aaKnown RBP20.21■□□□□ 0.83
SCARB1-208ENST00000544327 USP21Q9UK80 565 aa20.21■□□□□ 0.83
SCARB1-208ENST00000544327 USP17L8P0C7I0 530 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 ADRA2BP18089 450 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 CALML3P27482 149 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 TBX2Q13207 712 aaPredicted RBP20.2■□□□□ 0.82
SCARB1-208ENST00000544327 NFIXQ14938 502 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 FCHSD1Q86WN1 690 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 GRAMD1CQ8IYS0 662 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 PDILTQ8N807 584 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 PAGE5Q96GU1 130 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 NFE2L3Q9Y4A8 694 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 TOP1P11387 765 aaKnown RBP20.2■□□□□ 0.82
SCARB1-208ENST00000544327 GRM4Q14833 912 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 ZNF804AQ7Z570 1209 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 FAM177A1Q8N128 213 aaPredicted RBP20.2■□□□□ 0.82
SCARB1-208ENST00000544327 KIF18AQ8NI77 898 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 DHX58Q96C10 678 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 EPSTI1Q96J88 318 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 BCL11BQ9C0K0 894 aaPredicted RBP20.2■□□□□ 0.82
SCARB1-208ENST00000544327 KAT14Q9H8E8 782 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 ANKIB1Q9P2G1 1089 aa20.2■□□□□ 0.82
SCARB1-208ENST00000544327 SPATA31A6Q5VVP1 1343 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 BAG3O95817 575 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 LDHCP07864 332 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 GNAQP50148 359 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 NLRP5P59047 1200 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 TFAP4Q01664 338 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 NCBP1Q09161 790 aaKnown RBP20.19■□□□□ 0.82
SCARB1-208ENST00000544327 ZNF174Q15697 407 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 NOM1Q5C9Z4 860 aaKnown RBP20.19■□□□□ 0.82
SCARB1-208ENST00000544327 CNBD1Q8NA66 436 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 CERKQ8TCT0 537 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 UBE2Q2Q8WVN8 375 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 GSDMAQ96QA5 445 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 MED15Q96RN5 788 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 CCDC94Q9BW85 323 aaPredicted RBP20.19■□□□□ 0.82
SCARB1-208ENST00000544327 IL17RBQ9NRM6 502 aa20.19■□□□□ 0.82
SCARB1-208ENST00000544327 DDX60LQ5H9U9 1706 aaKnown RBP20.19■□□□□ 0.82
SCARB1-208ENST00000544327 TMEM232C9JQI7 657 aa20.18■□□□□ 0.82
SCARB1-208ENST00000544327 USP5P45974 858 aa20.18■□□□□ 0.82
SCARB1-208ENST00000544327 DPYDQ12882 1025 aa20.18■□□□□ 0.82
SCARB1-208ENST00000544327 PTGDRQ13258 359 aa20.18■□□□□ 0.82
SCARB1-208ENST00000544327 ARL6IP4Q66PJ3 421 aaKnown RBP20.18■□□□□ 0.82
SCARB1-208ENST00000544327 SH3RF3Q8TEJ3 882 aaPredicted RBP20.18■□□□□ 0.82
SCARB1-208ENST00000544327 NPHP1O15259 732 aa20.17■□□□□ 0.82
SCARB1-208ENST00000544327 E2F4Q16254 413 aa20.17■□□□□ 0.82
SCARB1-208ENST00000544327 ZNF827Q17R98 1081 aa20.17■□□□□ 0.82
SCARB1-208ENST00000544327 AMOTL1Q8IY63 956 aa20.17■□□□□ 0.82
SCARB1-208ENST00000544327 ZNF592Q92610 1267 aa20.17■□□□□ 0.82
SCARB1-208ENST00000544327 JAG2Q9Y219 1238 aa20.17■□□□□ 0.82
SCARB1-208ENST00000544327 CDK5RAP2Q96SN8 1893 aa20.17■□□□□ 0.82
SCARB1-208ENST00000544327 CUL4BQ13620 913 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 CRY2Q49AN0 593 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 FAM196AQ6ZSG2 479 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 BLIDQ8IZY5 108 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 DAGLBQ8NCG7 672 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 PNMA1Q8ND90 353 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 UBR3Q6ZT12 1888 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 SPATA1Q5VX52 437 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 GALNT17Q6IS24 598 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 PIK3AP1Q6ZUJ8 805 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 TMEM139Q8IV31 216 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 PDCL2Q8N4E4 241 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 PCDHA4Q9UN74 947 aa20.16■□□□□ 0.82
SCARB1-208ENST00000544327 A0A1B0GTH6 734 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 VWA3AA6NCI4 1184 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 UBAP1LF5GYI3 381 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 M0R2N6 131 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 ATP2B4P23634 1241 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 NR1I3Q14994 352 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 SPECC1LQ69YQ0 1117 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 PRR5LQ6MZQ0 368 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 C4orf32Q8N8J7 132 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 IQUBQ8NA54 791 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 LZTS2Q9BRK4 669 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 RTFDC1Q9BY42 306 aaPredicted RBP20.15■□□□□ 0.82
SCARB1-208ENST00000544327 L2HGDHQ9H9P8 463 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 MAD2L2Q9UI95 211 aa20.15■□□□□ 0.82
SCARB1-208ENST00000544327 ARHGAP6O43182 974 aa20.14■□□□□ 0.81
SCARB1-208ENST00000544327 IL1R1P14778 569 aa20.14■□□□□ 0.81
SCARB1-208ENST00000544327 CDK11BP21127 795 aaKnown RBP20.14■□□□□ 0.81
SCARB1-208ENST00000544327 TRMT44Q8IYL2 757 aaKnown RBP20.14■□□□□ 0.81
SCARB1-208ENST00000544327 DYNLL2Q96FJ2 89 aa20.14■□□□□ 0.81
SCARB1-208ENST00000544327 MKNK2Q9HBH9 465 aa20.14■□□□□ 0.81
SCARB1-208ENST00000544327 VEGFAP15692 232 aaPredicted RBP20.13■□□□□ 0.81
SCARB1-208ENST00000544327 LONP1P36776 959 aaKnown RBP20.13■□□□□ 0.81
SCARB1-208ENST00000544327 AFMP43652 599 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 GPSM2P81274 684 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 GRIK5Q16478 980 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 IL17AQ16552 155 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 PDXDC2PQ6P474 469 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 ERO1AQ96HE7 468 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 ZNF287Q9HBT7 754 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 SYNRGQ9UMZ2 1314 aa20.13■□□□□ 0.81
SCARB1-208ENST00000544327 GPR75-ASB3A0A0A6YYF3 556 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms