RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 CYP2C19P33261 490 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 PLCD1P51178 756 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 RTP1P59025 263 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 EVX2Q03828 476 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 SLFNL1Q499Z3 407 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 EHD4Q9H223 541 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 SERPINB13Q9UIV8 391 aa14.38□□□□□ -0.11
GABPB1-206ENST00000543881 ZNF532Q9HCE3 1301 aa14.37□□□□□ -0.11
GABPB1-206ENST00000543881 HOXC6P09630 235 aa14.37□□□□□ -0.11
GABPB1-206ENST00000543881 SHHQ15465 462 aa14.37□□□□□ -0.11
GABPB1-206ENST00000543881 CATSPERGQ6ZRH7 1159 aa14.37□□□□□ -0.11
GABPB1-206ENST00000543881 TRPV1Q8NER1 839 aa14.37□□□□□ -0.11
GABPB1-206ENST00000543881 MAFAQ8NHW3 353 aaPredicted RBP14.37□□□□□ -0.11
GABPB1-206ENST00000543881 NPLOC4Q8TAT6 608 aa14.37□□□□□ -0.11
GABPB1-206ENST00000543881 BOLA2Q9H3K6 86 aa14.37□□□□□ -0.11
GABPB1-206ENST00000543881 SEMA6BQ9H3T3 888 aa14.37□□□□□ -0.11
GABPB1-206ENST00000543881 ATP11BQ9Y2G3 1177 aa14.37□□□□□ -0.11
GABPB1-206ENST00000543881 IVNS1ABPQ9Y6Y0 642 aa14.37□□□□□ -0.11
GABPB1-206ENST00000543881 RLFQ13129 1914 aa14.36□□□□□ -0.11
GABPB1-206ENST00000543881 SHMT1P34896 483 aa14.36□□□□□ -0.11
GABPB1-206ENST00000543881 GRB14Q14449 540 aa14.36□□□□□ -0.11
GABPB1-206ENST00000543881 GJC2Q5T442 439 aaPredicted RBP14.36□□□□□ -0.11
GABPB1-206ENST00000543881 TTC6Q86TZ1 520 aa14.36□□□□□ -0.11
GABPB1-206ENST00000543881 CHMP4BQ9H444 224 aaKnown RBP14.36□□□□□ -0.11
GABPB1-206ENST00000543881 BTBD7Q9P203 1132 aa14.36□□□□□ -0.11
GABPB1-206ENST00000543881 VCANP13611 3396 aa14.36□□□□□ -0.11
GABPB1-206ENST00000543881 CHGBP05060 677 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 CYBAP13498 195 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 ATP5JP18859 108 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 VCAM1P19320 739 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 USP14P54578 494 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 RAB3GAP1Q15042 981 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 C9orf50Q5SZB4 431 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 LBX2Q6XYB7 198 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 SLC39A5Q6ZMH5 540 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 LCORLQ8N3X6 602 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 ARRDC4Q8NCT1 418 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 SDR42E1Q8WUS8 393 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 KIAA1683Q9H0B3 1180 aa14.35□□□□□ -0.11
GABPB1-206ENST00000543881 PRDM5Q9NQX1 630 aaPredicted RBP14.35□□□□□ -0.11
GABPB1-206ENST00000543881 SMARCA5O60264 1052 aaPredicted RBP14.34□□□□□ -0.11
GABPB1-206ENST00000543881 IGHA2P01877 340 aa14.34□□□□□ -0.11
GABPB1-206ENST00000543881 GUCY1A2P33402 732 aa14.34□□□□□ -0.11
GABPB1-206ENST00000543881 GABPAQ06546 454 aa14.34□□□□□ -0.11
GABPB1-206ENST00000543881 CERKLQ49MI3 558 aaPredicted RBP14.34□□□□□ -0.11
GABPB1-206ENST00000543881 HAUS7Q99871 368 aa14.34□□□□□ -0.11
GABPB1-206ENST00000543881 CRNKL1Q9BZJ0 848 aaKnown RBP14.34□□□□□ -0.11
GABPB1-206ENST00000543881 PAG1Q9NWQ8 432 aa14.34□□□□□ -0.11
GABPB1-206ENST00000543881 PRUNE2Q8WUY3 3088 aa14.34□□□□□ -0.11
GABPB1-206ENST00000543881 NAV1Q8NEY1 1877 aa14.34□□□□□ -0.11
GABPB1-206ENST00000543881 SPDYE16A6NNV3 312 aaPredicted RBP14.33□□□□□ -0.12
GABPB1-206ENST00000543881 KBTBD13C9JR72 458 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 PRKAB2O43741 272 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 POLR3DP05423 398 aaPredicted RBP14.33□□□□□ -0.12
GABPB1-206ENST00000543881 CYP2D6P10635 497 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 ADD2P35612 726 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 SMAD3P84022 425 aaKnown RBP14.33□□□□□ -0.12
GABPB1-206ENST00000543881 ABCB5Q2M3G0 1257 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 ACER1Q8TDN7 264 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 MYLIPQ8WY64 445 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 BADQ92934 168 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 LRRCC1Q9C099 1032 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 RPAP3Q9H6T3 665 aaPredicted RBP14.33□□□□□ -0.12
GABPB1-206ENST00000543881 ARMT1Q9H993 441 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 DCP1AQ9NPI6 582 aaPredicted RBP14.33□□□□□ -0.12
GABPB1-206ENST00000543881 PRDM6Q9NQX0 595 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 MCM9Q9NXL9 1143 aa14.33□□□□□ -0.12
GABPB1-206ENST00000543881 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
GABPB1-206ENST00000543881 TRIM60Q495X7 471 aa14.32□□□□□ -0.12
GABPB1-206ENST00000543881 ANO1Q5XXA6 986 aa14.32□□□□□ -0.12
GABPB1-206ENST00000543881 OLFML2BQ68BL8 750 aa14.32□□□□□ -0.12
GABPB1-206ENST00000543881 DPP9Q86TI2 863 aa14.32□□□□□ -0.12
GABPB1-206ENST00000543881 TTYH1Q9H313 450 aaPredicted RBP14.32□□□□□ -0.12
GABPB1-206ENST00000543881 SMIM22K7EJ46 135 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 MBD4O95243 580 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 ADORA2AP29274 412 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 SNX17Q15036 470 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 SLC44A5Q8NCS7 719 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 CABP5Q9NP86 173 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 PDLIM7Q9NR12 457 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 ZNF236Q9UL36 1845 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 TRIM43BA6NCK2 446 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 SEPT4O43236 478 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 STRNO43815 780 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 FOSL2P15408 326 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 SEPT2Q15019 361 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 SH3RF1Q7Z6J0 888 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 TRIM43Q96BQ3 446 aaPredicted RBP14.31□□□□□ -0.12
GABPB1-206ENST00000543881 DYNLL2Q96FJ2 89 aa14.31□□□□□ -0.12
GABPB1-206ENST00000543881 MOV10L1Q9BXT6 1211 aaKnown RBP14.31□□□□□ -0.12
GABPB1-206ENST00000543881 A0A1W2PRG0 241 aa14.3□□□□□ -0.12
GABPB1-206ENST00000543881 ADCYAP1R1P41586 468 aa14.3□□□□□ -0.12
GABPB1-206ENST00000543881 FERMT2Q96AC1 680 aa14.3□□□□□ -0.12
GABPB1-206ENST00000543881 DCTPP1Q9H773 170 aa14.3□□□□□ -0.12
GABPB1-206ENST00000543881 SPTBN5Q9NRC6 3674 aaKnown RBP14.3□□□□□ -0.12
GABPB1-206ENST00000543881 CYP2D7A0A087X1C5 515 aa14.29□□□□□ -0.12
GABPB1-206ENST00000543881 COBLO75128 1261 aa14.29□□□□□ -0.12
GABPB1-206ENST00000543881 ERCC3P19447 782 aa14.29□□□□□ -0.12
GABPB1-206ENST00000543881 COG2Q14746 738 aa14.29□□□□□ -0.12
GABPB1-206ENST00000543881 LRRC41Q15345 812 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms