RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZBTB12Q9Y330 459 aaPredicted RBP10.79□□□□□ -0.68
GNE-206ENST00000543356 XBP1P17861 261 aa10.78□□□□□ -0.68
GNE-206ENST00000543356 MYSM1Q5VVJ2 828 aa10.78□□□□□ -0.68
GNE-206ENST00000543356 TATDN1Q6P1N9 297 aa10.78□□□□□ -0.68
GNE-206ENST00000543356 RTEL1Q9NZ71 1219 aa10.78□□□□□ -0.68
GNE-206ENST00000543356 ZNF70Q9UC06 446 aaPredicted RBP10.78□□□□□ -0.68
GNE-206ENST00000543356 RCOR1Q9UKL0 485 aa10.78□□□□□ -0.68
GNE-206ENST00000543356 PALM3A6NDB9 673 aaPredicted RBP10.78□□□□□ -0.68
GNE-206ENST00000543356 ZNF445P59923 1031 aa10.78□□□□□ -0.68
GNE-206ENST00000543356 SAFBQ15424 915 aaKnown RBP eCLIP10.78□□□□□ -0.68
GNE-206ENST00000543356 CCDC82Q8N4S0 544 aa10.78□□□□□ -0.68
GNE-206ENST00000543356 USP28Q96RU2 1077 aa10.78□□□□□ -0.68
GNE-206ENST00000543356 POLR3EQ9NVU0 708 aa10.78□□□□□ -0.68
GNE-206ENST00000543356 TMEM63CQ9P1W3 806 aa10.78□□□□□ -0.68
GNE-206ENST00000543356 DICER1Q9UPY3 1922 aaKnown RBP10.78□□□□□ -0.68
GNE-206ENST00000543356 ZNF280AP59817 542 aaPredicted RBP10.77□□□□□ -0.68
GNE-206ENST00000543356 RASSF7Q02833 373 aa10.77□□□□□ -0.68
GNE-206ENST00000543356 ZSCAN23Q3MJ62 389 aa10.77□□□□□ -0.68
GNE-206ENST00000543356 ZSCAN29Q8IWY8 852 aaPredicted RBP10.77□□□□□ -0.68
GNE-206ENST00000543356 FAM151AQ8WW52 585 aa10.77□□□□□ -0.68
GNE-206ENST00000543356 TRIM34Q9BYJ4 488 aa10.77□□□□□ -0.68
GNE-206ENST00000543356 FOXP1Q9H334 677 aaPredicted RBP10.77□□□□□ -0.68
GNE-206ENST00000543356 V9GY48 417 aaPredicted RBP10.77□□□□□ -0.68
GNE-206ENST00000543356 CNTNAP1P78357 1384 aa10.77□□□□□ -0.69
GNE-206ENST00000543356 MYH4Q9Y623 1939 aa10.77□□□□□ -0.69
GNE-206ENST00000543356 FZD9O00144 591 aa10.77□□□□□ -0.69
GNE-206ENST00000543356 YEATS4O95619 227 aa10.77□□□□□ -0.69
GNE-206ENST00000543356 TTLL1O95922 423 aa10.77□□□□□ -0.69
GNE-206ENST00000543356 SMARCA1P28370 1054 aa10.77□□□□□ -0.69
GNE-206ENST00000543356 NASPP49321 788 aaPredicted RBP10.77□□□□□ -0.69
GNE-206ENST00000543356 GNL2Q13823 731 aaKnown RBP10.77□□□□□ -0.69
GNE-206ENST00000543356 PFKFB3Q16875 520 aaPredicted RBP10.77□□□□□ -0.69
GNE-206ENST00000543356 PHF20Q9BVI0 1012 aa10.77□□□□□ -0.69
GNE-206ENST00000543356 FSD2A1L4K1 749 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 SCG2P13521 617 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 DIS3L2Q8IYB7 885 aaKnown RBP10.76□□□□□ -0.69
GNE-206ENST00000543356 FAM177A1Q8N128 213 aaPredicted RBP10.76□□□□□ -0.69
GNE-206ENST00000543356 SPZ1Q9BXG8 430 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 HERC5Q9UII4 1024 aaKnown RBP10.76□□□□□ -0.69
GNE-206ENST00000543356 MYO1BO43795 1136 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 PARP1P09874 1014 aaKnown RBP10.76□□□□□ -0.69
GNE-206ENST00000543356 SNHG28P0DPA3 235 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 PRELPP51888 382 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 CERKLQ49MI3 558 aaPredicted RBP10.76□□□□□ -0.69
GNE-206ENST00000543356 FAM83AQ86UY5 434 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 NOSTRINQ8IVI9 506 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 STAG2Q8N3U4 1231 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 SHISA4Q96DD7 197 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 MYOZ2Q9NPC6 264 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 KCNJ14Q9UNX9 436 aa10.76□□□□□ -0.69
GNE-206ENST00000543356 CLRN2A0PK11 232 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 EIF6P56537 245 aaKnown RBP10.75□□□□□ -0.69
GNE-206ENST00000543356 ASPRV1Q53RT3 343 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 CCDC183Q5T5S1 534 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 KCNG4Q8TDN1 519 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 PGBD1Q96JS3 809 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 CSRNP1Q96S65 589 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 FTOQ9C0B1 505 aaKnown RBP eCLIP10.75□□□□□ -0.69
GNE-206ENST00000543356 SH3GLB2Q9NR46 395 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 VPS54Q9P1Q0 977 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 GOLGA6L4A6NEF3 574 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 TCP10L2B9ZVM9 353 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 MPHOSPH10O00566 681 aaKnown RBP10.75□□□□□ -0.69
GNE-206ENST00000543356 PDHBP11177 359 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 KRT2P35908 639 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 ANO1Q5XXA6 986 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 TMEM179Q6ZVK1 233 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 LINC00301Q8NCQ3 95 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 DPF2Q92785 391 aa10.75□□□□□ -0.69
GNE-206ENST00000543356 GOLGA6L3A6NEY3 463 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 BTBD18B2RXH4 712 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 KLRF2D3W0D1 207 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 BRD2P25440 801 aaKnown RBP10.74□□□□□ -0.69
GNE-206ENST00000543356 CEBPZQ03701 1054 aaKnown RBP10.74□□□□□ -0.69
GNE-206ENST00000543356 SLC35G1Q2M3R5 365 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 SAMD1Q6SPF0 538 aaPredicted RBP10.74□□□□□ -0.69
GNE-206ENST00000543356 MKL1Q969V6 931 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 KANSL2Q9H9L4 492 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 BRMS1Q9HCU9 246 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 NYAP2Q9P242 653 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 CLIC4Q9Y696 253 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 hCG_1642624A0A1W2PR95 340 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 FAM196BA6NMK8 535 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 WNT10BO00744 389 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 CYTH3O43739 400 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 LETM1O95202 739 aaPredicted RBP10.74□□□□□ -0.69
GNE-206ENST00000543356 CLCN1P35523 988 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 STK38Q15208 465 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 LRRC47Q8N1G4 583 aaKnown RBP10.74□□□□□ -0.69
GNE-206ENST00000543356 CLIP2Q9UDT6 1046 aa10.74□□□□□ -0.69
GNE-206ENST00000543356 USP17L5A8MUK1 530 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 TBC1D12O60347 775 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 SLURP2P0DP57 97 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 GMPSP49915 693 aaPredicted RBP10.73□□□□□ -0.69
GNE-206ENST00000543356 NPY5RQ15761 445 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 ABCB5Q2M3G0 1257 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 RILPL1Q5EBL4 403 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 L1TD1Q5T7N2 865 aaKnown RBP10.73□□□□□ -0.69
GNE-206ENST00000543356 CLEC10AQ8IUN9 316 aa10.73□□□□□ -0.69
GNE-206ENST00000543356 VEZTQ9HBM0 779 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms