RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 PDRG1Q9NUG6 133 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 TNKSO95271 1327 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 OTOFQ9HC10 1997 aa6.89□□□□□ -1.31
ABCF1-207ENST00000542772 MYH4Q9Y623 1939 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 A0A0G2JLL6 359 aaPredicted RBP6.88□□□□□ -1.31
ABCF1-207ENST00000542772 PALM3A6NDB9 673 aaPredicted RBP6.88□□□□□ -1.31
ABCF1-207ENST00000542772 SLC10A3P09131 477 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 PDIA3P30101 505 aaKnown RBP6.88□□□□□ -1.31
ABCF1-207ENST00000542772 HOXA7P31268 230 aaPredicted RBP6.88□□□□□ -1.31
ABCF1-207ENST00000542772 TM4SF4P48230 202 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 MCM2P49736 904 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 ZNF157P51786 506 aaPredicted RBP6.88□□□□□ -1.31
ABCF1-207ENST00000542772 USP14P54578 494 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 AK2P54819 239 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 C1QTNF8P60827 252 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 ICA1Q05084 483 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 TMEM67Q5HYA8 995 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 KIAA1755Q5JYT7 1200 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 IFIT1BQ5T764 474 aaKnown RBP6.88□□□□□ -1.31
ABCF1-207ENST00000542772 USP17L2Q6R6M4 530 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 BTNL9Q6UXG8 535 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 PRRT2Q7Z6L0 340 aaPredicted RBP6.88□□□□□ -1.31
ABCF1-207ENST00000542772 CCDC84Q86UT8 332 aaPredicted RBP6.88□□□□□ -1.31
ABCF1-207ENST00000542772 PNMA1Q8ND90 353 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 CNKSR2Q8WXI2 1034 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 LPAR1Q92633 364 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 BRF1Q92994 677 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 SNX21Q969T3 373 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 OPTNQ96CV9 577 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 GMCL1Q96IK5 515 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 WNK4Q96J92 1243 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 ZSCAN31Q96LW9 406 aaPredicted RBP6.88□□□□□ -1.31
ABCF1-207ENST00000542772 TCEANC2Q96MN5 208 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 LRRC2Q9BYS8 371 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 SH2D4AQ9H788 454 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 VCPKMTQ9H867 229 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 FAM217BQ9NTX9 383 aaPredicted RBP6.88□□□□□ -1.31
ABCF1-207ENST00000542772 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.88□□□□□ -1.31
ABCF1-207ENST00000542772 BRPF3Q9ULD4 1205 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 STX8Q9UNK0 236 aa6.88□□□□□ -1.31
ABCF1-207ENST00000542772 CALM1P0DP23 149 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 CALM2P0DP24 149 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 CALM3P0DP25 149 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 PDHBP11177 359 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 GTF2A2P52657 109 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 SNAPC2Q13487 334 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 SLFN13Q68D06 897 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 GPAT2Q6NUI2 795 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 APOA5Q6Q788 366 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 CATSPERGQ6ZRH7 1159 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 FASTKD5Q7L8L6 764 aaKnown RBP6.87□□□□□ -1.31
ABCF1-207ENST00000542772 RASAL3Q86YV0 1011 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 CLEC10AQ8IUN9 316 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 REM2Q8IYK8 340 aaPredicted RBP6.87□□□□□ -1.31
ABCF1-207ENST00000542772 FANCBQ8NB91 859 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 PROCA1Q8NCQ7 364 aaPredicted RBP6.87□□□□□ -1.31
ABCF1-207ENST00000542772 DCAF4Q8WV16 495 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 OTUD5Q96G74 571 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 KAT14Q9H8E8 782 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 ZCCHC17Q9NP64 241 aaKnown RBP6.87□□□□□ -1.31
ABCF1-207ENST00000542772 MAD2L2Q9UI95 211 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 TPCN1Q9ULQ1 816 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 ADAMTS5Q9UNA0 930 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 LIMCH1Q9UPQ0 1083 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 HPS5Q9UPZ3 1129 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 SLC45A1Q9Y2W3 748 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 SLC12A7Q9Y666 1083 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 PTPRFP10586 1907 aa6.87□□□□□ -1.31
ABCF1-207ENST00000542772 NID2Q14112 1375 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 MANSC4A6NHS7 340 aaPredicted RBP6.86□□□□□ -1.31
ABCF1-207ENST00000542772 CCDC69A6NI79 296 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 TRIM75PA6NK02 468 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 WDR46O15213 610 aaKnown RBP6.86□□□□□ -1.31
ABCF1-207ENST00000542772 ST18O60284 1047 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 PFKFB2O60825 505 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 DDAH1O94760 285 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 CD2BP2O95400 341 aaKnown RBP6.86□□□□□ -1.31
ABCF1-207ENST00000542772 NDUFB10O96000 172 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 CETPP11597 493 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 HSPA6P17066 643 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 MAP2K2P36507 400 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 ZNF543Q08ER8 600 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 APOBRQ0VD83 1088 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 GRM4Q14833 912 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 NTRK3Q16288 839 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 ME3Q16798 604 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 GPATCH4Q5T3I0 446 aaKnown RBP6.86□□□□□ -1.31
ABCF1-207ENST00000542772 SYNE3Q6ZMZ3 975 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 CATIPQ7Z7H3 387 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 ANKRD23Q86SG2 305 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 ZNF654Q8IZM8 581 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 DNAJC5GQ8N7S2 189 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 MTMR8Q96EF0 704 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 PTPN18Q99952 460 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 RIOX1Q9H6W3 641 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 GOPCQ9HD26 462 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 HOXC10Q9NYD6 342 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 ABT1Q9ULW3 272 aaKnown RBP6.86□□□□□ -1.31
ABCF1-207ENST00000542772 RLFQ13129 1914 aa6.86□□□□□ -1.31
ABCF1-207ENST00000542772 KLF18A0A0U1RQI7 1052 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms