RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 IL17RBQ9NRM6 502 aa16.86■□□□□ 0.29
DDX55-209ENST00000542286 LRRC4BQ9NT99 713 aa16.86■□□□□ 0.29
DDX55-209ENST00000542286 ERICH4A6NGS2 130 aa16.85■□□□□ 0.29
DDX55-209ENST00000542286 PLCD1P51178 756 aa16.85■□□□□ 0.29
DDX55-209ENST00000542286 FAM177A1Q8N128 213 aaPredicted RBP16.85■□□□□ 0.29
DDX55-209ENST00000542286 CD44P16070 742 aaKnown RBP16.85■□□□□ 0.29
DDX55-209ENST00000542286 USP5P45974 858 aa16.85■□□□□ 0.29
DDX55-209ENST00000542286 TPM4P67936 248 aa16.85■□□□□ 0.29
DDX55-209ENST00000542286 PTGDRQ13258 359 aa16.85■□□□□ 0.29
DDX55-209ENST00000542286 VPS72Q15906 364 aa16.85■□□□□ 0.29
DDX55-209ENST00000542286 TYW1BQ6NUM6 668 aa16.85■□□□□ 0.29
DDX55-209ENST00000542286 NYAP1Q6ZVC0 841 aa16.85■□□□□ 0.29
DDX55-209ENST00000542286 SMARCE1Q969G3 411 aa16.85■□□□□ 0.29
DDX55-209ENST00000542286 ZNF215Q9UL58 517 aaPredicted RBP16.85■□□□□ 0.29
DDX55-209ENST00000542286 IKBKBO14920 756 aa16.84■□□□□ 0.29
DDX55-209ENST00000542286 PRPF3O43395 683 aaKnown RBP16.84■□□□□ 0.29
DDX55-209ENST00000542286 CTCFLQ8NI51 663 aaPredicted RBP16.84■□□□□ 0.29
DDX55-209ENST00000542286 IPO4Q8TEX9 1081 aaKnown RBP16.84■□□□□ 0.29
DDX55-209ENST00000542286 PPP1R13BQ96KQ4 1090 aa16.84■□□□□ 0.29
DDX55-209ENST00000542286 NYXQ9GZU5 481 aa16.84■□□□□ 0.29
DDX55-209ENST00000542286 FAM205AQ6ZU69 1335 aa16.84■□□□□ 0.29
DDX55-209ENST00000542286 TNRC6CQ9HCJ0 1690 aaKnown RBP16.84■□□□□ 0.29
DDX55-209ENST00000542286 ADKP55263 362 aaKnown RBP16.84■□□□□ 0.29
DDX55-209ENST00000542286 NLRP5P59047 1200 aa16.84■□□□□ 0.29
DDX55-209ENST00000542286 IL17AQ16552 155 aa16.84■□□□□ 0.29
DDX55-209ENST00000542286 SLC35G1Q2M3R5 365 aa16.84■□□□□ 0.29
DDX55-209ENST00000542286 SYT10Q6XYQ8 523 aa16.83■□□□□ 0.29
DDX55-209ENST00000542286 PLIN2Q99541 437 aa16.83■□□□□ 0.29
DDX55-209ENST00000542286 TOM1O60784 492 aa16.83■□□□□ 0.28
DDX55-209ENST00000542286 STX8Q9UNK0 236 aa16.83■□□□□ 0.28
DDX55-209ENST00000542286 MAPK8IP1Q9UQF2 711 aa16.83■□□□□ 0.28
DDX55-209ENST00000542286 GSDMDP57764 484 aa16.83■□□□□ 0.28
DDX55-209ENST00000542286 TTC38Q5R3I4 469 aa16.83■□□□□ 0.28
DDX55-209ENST00000542286 LDHBP07195 334 aaKnown RBP16.82■□□□□ 0.28
DDX55-209ENST00000542286 DPYDQ12882 1025 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 FBXO38Q6PIJ6 1188 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 CREBRFQ8IUR6 639 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 TNFRSF25Q93038 417 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 ANKRD2Q9GZV1 360 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 FAM53CQ9NYF3 392 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 BTAF1O14981 1849 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 SRCAPQ6ZRS2 3230 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 PP2D1A8MPX8 630 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 FGRP09769 529 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 MORC3Q14149 939 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 ST7Q9NRC1 585 aa16.82■□□□□ 0.28
DDX55-209ENST00000542286 IRS2Q9Y4H2 1338 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 FANCGO15287 622 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 TEX33O43247 280 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 NEMFO60524 1076 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 SLURP2P0DP57 97 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 TOP1P11387 765 aaKnown RBP16.81■□□□□ 0.28
DDX55-209ENST00000542286 XBP1P17861 261 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 GPSM2P81274 684 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 TRAPPC3LQ5T215 181 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 CNBD1Q8NA66 436 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 PAGE5Q96GU1 130 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 CALCOCO1Q9P1Z2 691 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.81■□□□□ 0.28
DDX55-209ENST00000542286 SCG2P13521 617 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 SARSP49591 514 aaKnown RBP16.81■□□□□ 0.28
DDX55-209ENST00000542286 MAPK8IP2Q13387 824 aaPredicted RBP16.81■□□□□ 0.28
DDX55-209ENST00000542286 VSTM4Q8IW00 320 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 CPLX3Q8WVH0 158 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 MKNK2Q9HBH9 465 aa16.81■□□□□ 0.28
DDX55-209ENST00000542286 ELF2Q15723 593 aa16.8■□□□□ 0.28
DDX55-209ENST00000542286 PNMA1Q8ND90 353 aa16.8■□□□□ 0.28
DDX55-209ENST00000542286 IMPACTQ9P2X3 320 aa16.8■□□□□ 0.28
DDX55-209ENST00000542286 ORC4O43929 436 aa16.8■□□□□ 0.28
DDX55-209ENST00000542286 KAT14Q9H8E8 782 aa16.8■□□□□ 0.28
DDX55-209ENST00000542286 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
DDX55-209ENST00000542286 C12orf60Q5U649 245 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 PRR5LQ6MZQ0 368 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 HOMER1Q86YM7 354 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 CLEC10AQ8IUN9 316 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 PLCD3Q8N3E9 789 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 CCDC150Q8NCX0 1101 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 MTRQ99707 1265 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 DESI2Q9BSY9 194 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 RBM28Q9NW13 759 aaKnown RBP16.79■□□□□ 0.28
DDX55-209ENST00000542286 A0A0U1RQJ8 604 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 F8W031 263 aaPredicted RBP16.79■□□□□ 0.28
DDX55-209ENST00000542286 CYTH3O43739 400 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 DDAH1O94760 285 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 UFL1O94874 794 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 MTF1Q14872 753 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 ATRIPQ8WXE1 791 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 EEF2KMTQ96G04 330 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 VAT1LQ9HCJ6 419 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 ARPP21Q9UBL0 812 aaPredicted RBP16.79■□□□□ 0.28
DDX55-209ENST00000542286 CEP131Q9UPN4 1083 aa16.79■□□□□ 0.28
DDX55-209ENST00000542286 SEMA3EO15041 775 aa16.78■□□□□ 0.28
DDX55-209ENST00000542286 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
DDX55-209ENST00000542286 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
DDX55-209ENST00000542286 MTA3Q9BTC8 594 aa16.78■□□□□ 0.28
DDX55-209ENST00000542286 MKRN1Q9UHC7 482 aaKnown RBP16.78■□□□□ 0.28
DDX55-209ENST00000542286 TSPY3P0CV98 308 aa16.78■□□□□ 0.28
DDX55-209ENST00000542286 TSPY8P0CW00 308 aa16.78■□□□□ 0.28
DDX55-209ENST00000542286 GRAPQ13588 217 aa16.78■□□□□ 0.28
DDX55-209ENST00000542286 CUL4BQ13620 913 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms