RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 SCAND2PQ9GZW5 306 aaPredicted RBP17.59■□□□□ 0.41
CLPTM1-202ENST00000541297 TAOK3Q9H2K8 898 aa17.59■□□□□ 0.41
CLPTM1-202ENST00000541297 SERPINB13Q9UIV8 391 aa17.59■□□□□ 0.41
CLPTM1-202ENST00000541297 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
CLPTM1-202ENST00000541297 TRIM29Q14134 588 aa17.59■□□□□ 0.41
CLPTM1-202ENST00000541297 MAP3K11Q16584 847 aa17.59■□□□□ 0.41
CLPTM1-202ENST00000541297 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
CLPTM1-202ENST00000541297 ANKRD7Q92527 254 aa17.59■□□□□ 0.41
CLPTM1-202ENST00000541297 FAM198AQ9UFP1 575 aa17.59■□□□□ 0.41
CLPTM1-202ENST00000541297 FAM196BA6NMK8 535 aa17.58■□□□□ 0.41
CLPTM1-202ENST00000541297 U2AF2P26368 475 aaKnown RBP eCLIP17.58■□□□□ 0.41
CLPTM1-202ENST00000541297 TYRO3Q06418 890 aa17.58■□□□□ 0.41
CLPTM1-202ENST00000541297 GABPAQ06546 454 aa17.58■□□□□ 0.41
CLPTM1-202ENST00000541297 RASGRP2Q7LDG7 609 aa17.58■□□□□ 0.41
CLPTM1-202ENST00000541297 USP28Q96RU2 1077 aa17.58■□□□□ 0.41
CLPTM1-202ENST00000541297 NUP62CLQ9H1M0 184 aa17.58■□□□□ 0.41
CLPTM1-202ENST00000541297 RBM28Q9NW13 759 aaKnown RBP17.58■□□□□ 0.41
CLPTM1-202ENST00000541297 ZNRF3Q9ULT6 936 aa17.58■□□□□ 0.41
CLPTM1-202ENST00000541297 KCNJ14Q9UNX9 436 aa17.58■□□□□ 0.41
CLPTM1-202ENST00000541297 CTIFO43310 598 aaKnown RBP17.58■□□□□ 0.4
CLPTM1-202ENST00000541297 DEXIO95424 95 aa17.58■□□□□ 0.4
CLPTM1-202ENST00000541297 VIL1P09327 827 aaKnown RBP17.58■□□□□ 0.4
CLPTM1-202ENST00000541297 KIF23Q02241 960 aaPredicted RBP17.58■□□□□ 0.4
CLPTM1-202ENST00000541297 PPP2R5BQ15173 497 aa17.58■□□□□ 0.4
CLPTM1-202ENST00000541297 NLGN2Q8NFZ4 835 aa17.58■□□□□ 0.4
CLPTM1-202ENST00000541297 CEP95Q96GE4 821 aa17.58■□□□□ 0.4
CLPTM1-202ENST00000541297 TMEM47Q9BQJ4 181 aa17.58■□□□□ 0.4
CLPTM1-202ENST00000541297 TCP11L1Q9NUJ3 509 aa17.58■□□□□ 0.4
CLPTM1-202ENST00000541297 SIPA1L1O43166 1804 aa17.58■□□□□ 0.4
CLPTM1-202ENST00000541297 DDTLA6NHG4 134 aaPredicted RBP17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 NFKBIEO00221 500 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 HLA-DOAP06340 250 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 SRBD1Q8N5C6 995 aaKnown RBP17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 NEDD1Q8NHV4 660 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 CFAP45Q9UL16 551 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 CD2APQ9Y5K6 639 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 V9GY48 417 aaPredicted RBP17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 AKR1B1P15121 316 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 AKAP17AQ02040 695 aaKnown RBP17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 FUT2Q10981 343 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 GNL2Q13823 731 aaKnown RBP17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 TMTC3Q6ZXV5 915 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 CCDC186Q7Z3E2 898 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 CLEC10AQ8IUN9 316 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 WASF1Q92558 559 aa17.57■□□□□ 0.4
CLPTM1-202ENST00000541297 EIF6P56537 245 aaKnown RBP17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 LRMPQ12912 555 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 STAG2Q8N3U4 1231 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 RNF26Q9BY78 433 aaPredicted RBP17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 GTPBP4Q9BZE4 634 aaKnown RBP17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 NRBP1Q9UHY1 535 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 CXCL9Q07325 125 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 IDI2Q9BXS1 227 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 MYO3BQ8WXR4 1341 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 CLRN2A0PK11 232 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 SHMT1P34896 483 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 NT5C2P49902 561 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 CCDC178Q5BJE1 867 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 SH3BP5LQ7L8J4 393 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 OGFOD1Q8N543 542 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 ANKS1AQ92625 1134 aa17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLPTM1-202ENST00000541297 ELP1O95163 1332 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 RASSF7Q02833 373 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 PDE4CQ08493 712 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 PKN1Q16512 942 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 ANO6Q4KMQ2 910 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 DRC7Q8IY82 874 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 JDP2Q8WYK2 163 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 ZNF396Q96N95 335 aaPredicted RBP17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 GMLQ99445 158 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 VPS33BQ9H267 617 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 CBX8Q9HC52 389 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 DACT1Q9NYF0 836 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 VPS54Q9P1Q0 977 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 CNTNAP5Q8WYK1 1306 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 MPHOSPH10O00566 681 aaKnown RBP17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 MYSM1Q5VVJ2 828 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 TNMDQ9H2S6 317 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 DNAJC18Q9H819 358 aa17.55■□□□□ 0.4
CLPTM1-202ENST00000541297 GOLGA6L4A6NEF3 574 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 GOLGA8HP0CJ92 632 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 BRAPQ7Z569 592 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 SHISA4Q96DD7 197 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 PGBD1Q96JS3 809 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 C16orf45Q96MC5 204 aaPredicted RBP17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 HDAC9Q9UKV0 1011 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 CLIC4Q9Y696 253 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 SPDYE2BA6NHP3 402 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 TCP10L2B9ZVM9 353 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 PRPF3O43395 683 aaKnown RBP17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 MMP1P03956 469 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 SPDYE6P0CI01 402 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 KIF5BP33176 963 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 DLGAP5Q15398 846 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 SWAP70Q9UH65 585 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 MAD2L2Q9UI95 211 aa17.54■□□□□ 0.4
CLPTM1-202ENST00000541297 BTBD18B2RXH4 712 aa17.53■□□□□ 0.4
CLPTM1-202ENST00000541297 SHROOM1Q2M3G4 852 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms