RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 V9GY48 417 aaPredicted RBP19.7■□□□□ 0.74
PCDHB17P-201ENST00000539533 MYH15Q9Y2K3 1946 aa19.69■□□□□ 0.74
PCDHB17P-201ENST00000539533 DDTLA6NHG4 134 aaPredicted RBP19.69■□□□□ 0.74
PCDHB17P-201ENST00000539533 NFKBIEO00221 500 aa19.69■□□□□ 0.74
PCDHB17P-201ENST00000539533 TRIM29Q14134 588 aa19.69■□□□□ 0.74
PCDHB17P-201ENST00000539533 CEP95Q96GE4 821 aa19.69■□□□□ 0.74
PCDHB17P-201ENST00000539533 MTMR7Q9Y216 660 aa19.69■□□□□ 0.74
PCDHB17P-201ENST00000539533 MYO3BQ8WXR4 1341 aa19.69■□□□□ 0.74
PCDHB17P-201ENST00000539533 SH3BP5LQ7L8J4 393 aa19.69■□□□□ 0.74
PCDHB17P-201ENST00000539533 RGS22Q8NE09 1264 aa19.69■□□□□ 0.74
PCDHB17P-201ENST00000539533 KCNJ14Q9UNX9 436 aa19.69■□□□□ 0.74
PCDHB17P-201ENST00000539533 HLA-DOAP06340 250 aa19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 AKR1B1P15121 316 aa19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 CXCL9Q07325 125 aa19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 PKN1Q16512 942 aa19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 FER1L6Q2WGJ9 1857 aa19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 PRPF3O43395 683 aaKnown RBP19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 CCDC192P0DO97 292 aa19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 SHMT1P34896 483 aa19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 AKAP17AQ02040 695 aaKnown RBP19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 DMTNQ08495 405 aa19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 STAG2Q8N3U4 1231 aa19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 NLGN2Q8NFZ4 835 aa19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 ZNF396Q96N95 335 aaPredicted RBP19.68■□□□□ 0.74
PCDHB17P-201ENST00000539533 BRAPQ7Z569 592 aa19.67■□□□□ 0.74
PCDHB17P-201ENST00000539533 ZSCAN29Q8IWY8 852 aaPredicted RBP19.67■□□□□ 0.74
PCDHB17P-201ENST00000539533 PGBD1Q96JS3 809 aa19.67■□□□□ 0.74
PCDHB17P-201ENST00000539533 BAZ2BQ9UIF8 2168 aaKnown RBP19.67■□□□□ 0.74
PCDHB17P-201ENST00000539533 FAM196BA6NMK8 535 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 MYSM1Q5VVJ2 828 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 RASGRP2Q7LDG7 609 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 SHISA4Q96DD7 197 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 DNAJC18Q9H819 358 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 SWAP70Q9UH65 585 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 RCOR1Q9UKL0 485 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 CNTNAP5Q8WYK1 1306 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 MYH6P13533 1939 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 TPM3P06753 285 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 UTP14CQ5TAP6 766 aaKnown RBP19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 OGFOD1Q8N543 542 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 KIAA1524Q8TCG1 905 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 TSC1Q92574 1164 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 DHX36Q9H2U1 1008 aaKnown RBP19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 KCNF1Q9H3M0 494 aa19.66■□□□□ 0.74
PCDHB17P-201ENST00000539533 SPDYE2BA6NHP3 402 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 MMP1P03956 469 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 SPDYE6P0CI01 402 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 KIF5BP33176 963 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 ATL3Q6DD88 541 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 ZNF710Q8N1W2 664 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 JDP2Q8WYK2 163 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 MAD2L2Q9UI95 211 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 HDAC9Q9UKV0 1011 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 GNL2Q13823 731 aaKnown RBP19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 GRM4Q14833 912 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 CLEC10AQ8IUN9 316 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 MAP3K14Q99558 947 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 EHD4Q9H223 541 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 VPS54Q9P1Q0 977 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 PI4KBQ9UBF8 816 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 CLIC4Q9Y696 253 aa19.65■□□□□ 0.74
PCDHB17P-201ENST00000539533 CLRN2A0PK11 232 aa19.64■□□□□ 0.74
PCDHB17P-201ENST00000539533 BTBD18B2RXH4 712 aa19.64■□□□□ 0.74
PCDHB17P-201ENST00000539533 NPM3O75607 178 aaKnown RBP19.64■□□□□ 0.74
PCDHB17P-201ENST00000539533 U2AF2P26368 475 aaKnown RBP eCLIP19.64■□□□□ 0.74
PCDHB17P-201ENST00000539533 NOVP48745 357 aa19.64■□□□□ 0.74
PCDHB17P-201ENST00000539533 DLGAP5Q15398 846 aa19.64■□□□□ 0.74
PCDHB17P-201ENST00000539533 MTMR4Q9NYA4 1195 aa19.64■□□□□ 0.74
PCDHB17P-201ENST00000539533 PYCARDQ9ULZ3 195 aa19.64■□□□□ 0.74
PCDHB17P-201ENST00000539533 MYH8P13535 1937 aa19.64■□□□□ 0.73
PCDHB17P-201ENST00000539533 GOLGA6L4A6NEF3 574 aa19.64■□□□□ 0.73
PCDHB17P-201ENST00000539533 VEGFAP15692 232 aaPredicted RBP19.64■□□□□ 0.73
PCDHB17P-201ENST00000539533 EIF6P56537 245 aaKnown RBP19.64■□□□□ 0.73
PCDHB17P-201ENST00000539533 SRCAPQ6ZRS2 3230 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 SIPA1L1O43166 1804 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 PLIN4Q96Q06 1357 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 GOLGA8HP0CJ92 632 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 TOP1P11387 765 aaKnown RBP19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 ZSCAN20P17040 1043 aaPredicted RBP19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 CIAPIN1Q6FI81 312 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 DIS3L2Q8IYB7 885 aaKnown RBP19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 SPC24Q8NBT2 197 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 AGBL3Q8NEM8 1001 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 FAM200AQ8TCP9 573 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 RTEL1Q9NZ71 1219 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 IGKV6D-41A0A0C4DH26 115 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 GOLGA6L6A8MZA4 724 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 TCP10L2B9ZVM9 353 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 LIG1P18858 919 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 RASSF7Q02833 373 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 MAP3K11Q16584 847 aa19.63■□□□□ 0.73
PCDHB17P-201ENST00000539533 PALM3A6NDB9 673 aaPredicted RBP19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 MPHOSPH10O00566 681 aaKnown RBP19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 PRELPP51888 382 aa19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 SLC35G1Q2M3R5 365 aa19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 OXER1Q8TDS5 423 aa19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 NUP62CLQ9H1M0 184 aa19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 A0A0U1RQG5 324 aaPredicted RBP19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 SHTN1A0MZ66 631 aa19.62■□□□□ 0.73
PCDHB17P-201ENST00000539533 ENTPD3O75355 529 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms