RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 SMARCA5O60264 1052 aaPredicted RBP20.86■□□□□ 0.93
PDCD2-207ENST00000539212 RAB11FIP3O75154 756 aa20.86■□□□□ 0.93
PDCD2-207ENST00000539212 MAP2K5Q13163 448 aa20.86■□□□□ 0.93
PDCD2-207ENST00000539212 NBPF3Q9H094 633 aa20.86■□□□□ 0.93
PDCD2-207ENST00000539212 SOX1O00570 391 aaPredicted RBP20.85■□□□□ 0.93
PDCD2-207ENST00000539212 AKR1B1P15121 316 aa20.85■□□□□ 0.93
PDCD2-207ENST00000539212 SYN1P17600 705 aa20.85■□□□□ 0.93
PDCD2-207ENST00000539212 CAPN2P17655 700 aa20.85■□□□□ 0.93
PDCD2-207ENST00000539212 ATP5JP18859 108 aa20.84■□□□□ 0.93
PDCD2-207ENST00000539212 LHX8Q68G74 356 aa20.84■□□□□ 0.93
PDCD2-207ENST00000539212 LBX2Q6XYB7 198 aa20.84■□□□□ 0.93
PDCD2-207ENST00000539212 HAUS7Q99871 368 aa20.84■□□□□ 0.93
PDCD2-207ENST00000539212 TANGO6Q9C0B7 1094 aa20.84■□□□□ 0.93
PDCD2-207ENST00000539212 GREB1LQ9C091 1923 aaPredicted RBP20.84■□□□□ 0.93
PDCD2-207ENST00000539212 ZNFX1Q9P2E3 1918 aaKnown RBP20.83■□□□□ 0.93
PDCD2-207ENST00000539212 PTPREP23469 700 aa20.83■□□□□ 0.93
PDCD2-207ENST00000539212 CCNA1P78396 465 aa20.83■□□□□ 0.93
PDCD2-207ENST00000539212 TRMT44Q8IYL2 757 aaKnown RBP20.83■□□□□ 0.93
PDCD2-207ENST00000539212 NPLOC4Q8TAT6 608 aa20.83■□□□□ 0.93
PDCD2-207ENST00000539212 GRB14Q14449 540 aa20.82■□□□□ 0.92
PDCD2-207ENST00000539212 TMEM179Q6ZVK1 233 aa20.82■□□□□ 0.92
PDCD2-207ENST00000539212 SIAH1Q8IUQ4 282 aa20.82■□□□□ 0.92
PDCD2-207ENST00000539212 SPICE1Q8N0Z3 855 aa20.82■□□□□ 0.92
PDCD2-207ENST00000539212 LRCH3Q96II8 777 aa20.82■□□□□ 0.92
PDCD2-207ENST00000539212 PLXNA1Q9UIW2 1896 aa20.81■□□□□ 0.92
PDCD2-207ENST00000539212 SLC15A5A6NIM6 579 aa20.81■□□□□ 0.92
PDCD2-207ENST00000539212 MOV10L1Q9BXT6 1211 aaKnown RBP20.81■□□□□ 0.92
PDCD2-207ENST00000539212 SWAP70Q9UH65 585 aa20.81■□□□□ 0.92
PDCD2-207ENST00000539212 GLRX3O76003 335 aaKnown RBP20.8■□□□□ 0.92
PDCD2-207ENST00000539212 COL6A1P12109 1028 aa20.8■□□□□ 0.92
PDCD2-207ENST00000539212 CYP2C19P33261 490 aa20.8■□□□□ 0.92
PDCD2-207ENST00000539212 ICA1Q05084 483 aa20.8■□□□□ 0.92
PDCD2-207ENST00000539212 SAMD1Q6SPF0 538 aaPredicted RBP20.8■□□□□ 0.92
PDCD2-207ENST00000539212 TRPV1Q8NER1 839 aa20.8■□□□□ 0.92
PDCD2-207ENST00000539212 LRRCC1Q9C099 1032 aa20.8■□□□□ 0.92
PDCD2-207ENST00000539212 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.8■□□□□ 0.92
PDCD2-207ENST00000539212 PUS7LQ9H0K6 701 aaKnown RBP20.8■□□□□ 0.92
PDCD2-207ENST00000539212 USP17L12C9JPN9 530 aa20.79■□□□□ 0.92
PDCD2-207ENST00000539212 USP17L21D6R901 530 aa20.79■□□□□ 0.92
PDCD2-207ENST00000539212 CDK8P49336 464 aa20.79■□□□□ 0.92
PDCD2-207ENST00000539212 COG2Q14746 738 aa20.79■□□□□ 0.92
PDCD2-207ENST00000539212 C12orf60Q5U649 245 aa20.79■□□□□ 0.92
PDCD2-207ENST00000539212 TSHZ3Q63HK5 1081 aa20.79■□□□□ 0.92
PDCD2-207ENST00000539212 ATG4CQ96DT6 458 aa20.79■□□□□ 0.92
PDCD2-207ENST00000539212 GDF15Q99988 308 aa20.79■□□□□ 0.92
PDCD2-207ENST00000539212 ATP8A2Q9NTI2 1148 aa20.79■□□□□ 0.92
PDCD2-207ENST00000539212 SLC4A4Q9Y6R1 1079 aa20.79■□□□□ 0.92
PDCD2-207ENST00000539212 IVNS1ABPQ9Y6Y0 642 aa20.79■□□□□ 0.92
PDCD2-207ENST00000539212 MYH4Q9Y623 1939 aa20.78■□□□□ 0.92
PDCD2-207ENST00000539212 ATP2B2Q01814 1243 aa20.78■□□□□ 0.92
PDCD2-207ENST00000539212 UBE3CQ15386 1083 aa20.78■□□□□ 0.92
PDCD2-207ENST00000539212 LRRC26Q2I0M4 334 aa20.78■□□□□ 0.92
PDCD2-207ENST00000539212 MFSD14CQ5VZR4 134 aa20.78■□□□□ 0.92
PDCD2-207ENST00000539212 SPATC1LQ9H0A9 340 aa20.78■□□□□ 0.92
PDCD2-207ENST00000539212 ARHGEF10LQ9HCE6 1279 aa20.78■□□□□ 0.92
PDCD2-207ENST00000539212 A0A1W2PPC1 479 aa20.77■□□□□ 0.92
PDCD2-207ENST00000539212 FLOT1O75955 427 aa20.77■□□□□ 0.92
PDCD2-207ENST00000539212 HOXC6P09630 235 aa20.77■□□□□ 0.92
PDCD2-207ENST00000539212 ERCC3P19447 782 aa20.77■□□□□ 0.92
PDCD2-207ENST00000539212 ADORA2AP29274 412 aa20.77■□□□□ 0.92
PDCD2-207ENST00000539212 CNGA1P29973 690 aa20.77■□□□□ 0.92
PDCD2-207ENST00000539212 DSG3P32926 999 aa20.77■□□□□ 0.92
PDCD2-207ENST00000539212 MAGEA10P43363 369 aaPredicted RBP20.77■□□□□ 0.92
PDCD2-207ENST00000539212 PLS1Q14651 629 aa20.77■□□□□ 0.92
PDCD2-207ENST00000539212 C16orf86Q6ZW13 317 aa20.77■□□□□ 0.92
PDCD2-207ENST00000539212 TMX2Q9Y320 296 aa20.77■□□□□ 0.92
PDCD2-207ENST00000539212 LTBP2Q14767 1821 aa20.76■□□□□ 0.91
PDCD2-207ENST00000539212 COL6A3P12111 3177 aa20.76■□□□□ 0.91
PDCD2-207ENST00000539212 CTR9Q6PD62 1173 aa20.76■□□□□ 0.91
PDCD2-207ENST00000539212 STK11IPQ8N1F8 1099 aa20.76■□□□□ 0.91
PDCD2-207ENST00000539212 CHMP4BQ9H444 224 aaKnown RBP20.76■□□□□ 0.91
PDCD2-207ENST00000539212 VCPKMTQ9H867 229 aa20.76■□□□□ 0.91
PDCD2-207ENST00000539212 DDX20Q9UHI6 824 aaKnown RBP20.76■□□□□ 0.91
PDCD2-207ENST00000539212 COBLO75128 1261 aa20.75■□□□□ 0.91
PDCD2-207ENST00000539212 IGHA2P01877 340 aa20.75■□□□□ 0.91
PDCD2-207ENST00000539212 EEF2P13639 858 aaKnown RBP20.75■□□□□ 0.91
PDCD2-207ENST00000539212 ANO1Q5XXA6 986 aa20.75■□□□□ 0.91
PDCD2-207ENST00000539212 DPP9Q86TI2 863 aa20.75■□□□□ 0.91
PDCD2-207ENST00000539212 FBXO28Q9NVF7 368 aa20.75■□□□□ 0.91
PDCD2-207ENST00000539212 HOXC10Q9NYD6 342 aa20.75■□□□□ 0.91
PDCD2-207ENST00000539212 CYBAP13498 195 aa20.74■□□□□ 0.91
PDCD2-207ENST00000539212 NCAPG2Q86XI2 1143 aa20.74■□□□□ 0.91
PDCD2-207ENST00000539212 LPAR1Q92633 364 aa20.74■□□□□ 0.91
PDCD2-207ENST00000539212 ECHDC1Q9NTX5 307 aa20.74■□□□□ 0.91
PDCD2-207ENST00000539212 BMP8BP34820 402 aa20.73■□□□□ 0.91
PDCD2-207ENST00000539212 AMOTL1Q8IY63 956 aa20.73■□□□□ 0.91
PDCD2-207ENST00000539212 SHCBP1Q8NEM2 672 aa20.73■□□□□ 0.91
PDCD2-207ENST00000539212 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.73■□□□□ 0.91
PDCD2-207ENST00000539212 SENP6Q9GZR1 1112 aaPredicted RBP20.73■□□□□ 0.91
PDCD2-207ENST00000539212 SH2D4AQ9H788 454 aa20.73■□□□□ 0.91
PDCD2-207ENST00000539212 WDR46O15213 610 aaKnown RBP20.72■□□□□ 0.91
PDCD2-207ENST00000539212 RAD21O60216 631 aa20.72■□□□□ 0.91
PDCD2-207ENST00000539212 ATN1P54259 1190 aaPredicted RBP20.72■□□□□ 0.91
PDCD2-207ENST00000539212 TMEM132BQ14DG7 1078 aa20.72■□□□□ 0.91
PDCD2-207ENST00000539212 PRAMEF19Q5SWL8 479 aa20.72■□□□□ 0.91
PDCD2-207ENST00000539212 ZSCAN25Q6NSZ9 544 aa20.72■□□□□ 0.91
PDCD2-207ENST00000539212 DDRGK1Q96HY6 314 aa20.72■□□□□ 0.91
PDCD2-207ENST00000539212 CCDC17Q96LX7 622 aa20.72■□□□□ 0.91
PDCD2-207ENST00000539212 STRBPQ96SI9 672 aaKnown RBP20.72■□□□□ 0.91
PDCD2-207ENST00000539212 SMCHD1A6NHR9 2005 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms